HHsearch alignment for GI: 254780627 and conserved domain: pfam08433
>pfam08433 KTI12 Chromatin associated protein KTI12. This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II. The Elongator complex has histone acetyltransferase activity.
Probab=94.82 E-value=0.39 Score=28.11 Aligned_cols=101 Identities=12% Similarity=0.232 Sum_probs=66.4
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHH---HHHHHHHHCCCH-----HHHHHHHHHCCHHHHHHHHH
Q ss_conf 8986278888579999999999863068816864698889---999999861988-----99999974031020544445
Q gi|254780627|r 199 LFIHASVGLGKTHLLQAIANASIKRQPNLRVVYLTAEYFM---WRFASAIRDNCA-----LNLKDSLRNIDLLLIDDMQF 270 (502)
Q Consensus 199 Lfi~G~~GlGKTHLl~ai~~~~~~~~~~~~v~y~~~e~F~---~~~~~a~~~~~~-----~~fr~~~r~~DvLliDDiqf 270 (502)
T Consensus 2 ivl~G~P~SGKSt~A~~L~~~l~~~--~~~v~vi~d~~~~~~~~~y~~s~~Ek~~R~~l~s~v~r~Ls~~~iVIlD~~NY 79 (266)
T pfam08433 2 IILTGLPSSGKSTRAKELAKYLEEK--GYDVIVISDESLGIESDDYKDSKKEKFLRGSLRSAVKRDLSKNTIVIVDSLNY 79 (266)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHC--CCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 7985799996889999999999975--99389978001267531000104789999999999987516688899548740
Q ss_pred HCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHH
Q ss_conf 31750699999999998856987999648756761
Q gi|254780627|r 271 LQGKLIQHEFCHLLNSLLDSAKQVVAAADRPPSEL 305 (502)
Q Consensus 271 l~gk~tqee~f~~~n~l~~~gkqiv~tsd~~P~~l 305 (502)
T Consensus 80 iKG~--RYEL~C~Ak--~~~t~~c~v~~~~p~e~~ 110 (266)
T pfam08433 80 IKGF--RYELYCIAK--EAKTTYCVVYCKAPLDTC 110 (266)
T ss_pred HHHH--HHHHHHHHH--HCCCCEEEEEECCCHHHH
T ss_conf 4568--999999998--638884899968998999