HHsearch alignment for GI: 254780627 and conserved domain: smart00760

>smart00760 Bac_DnaA_C Bacterial dnaA protein helix-turn-helix domain. Could be involved in DNA-binding.
Probab=99.75  E-value=2e-18  Score=150.99  Aligned_cols=60  Identities=47%  Similarity=0.749  Sum_probs=59.2

Q ss_pred             CHHHHHHHHHHHHCCCHHHHHCCCCCHHHCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCH
Q ss_conf             989999999998099999940888774014457999999998515687899988479843
Q gi|254780627|r  410 RIEDIQRMVAKHYNISRNDLLSNRRVRTVVRPRQVAMYLSKIMTPRSFPEIGRRFGDRDH  469 (502)
Q Consensus       410 ~~~~I~~~V~~~~~i~~~~l~s~~R~~~i~~~RqiamyL~r~~t~~s~~~IG~~fg~rdH  469 (502)
T Consensus         1 ti~~I~~~Va~~~~v~~~~i~s~~R~~~i~~aR~iamyL~r~~~~~s~~~IG~~fg~rdH   60 (60)
T smart00760        1 TIEEIIEAVAEYFGVKPEDLKSKSRKREIVLARQIAMYLARELTDLSLPEIGKIFGGRDH   60 (60)
T ss_pred             CHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
T ss_conf             999999999988399799985679981688899999999999867999999999778998