RPSBLAST alignment for GI: 254780627 and conserved domain: TIGR03420

>gnl|CDD|163254 TIGR03420, DnaA_homol_Hda, DnaA regulatory inactivator Hda. Members of this protein family are Hda (Homologous to DnaA). These proteins are about half the length of DnaA and homologous over length of Hda. In the model species Escherichia coli, the initiation of DNA replication requires DnaA bound to ATP rather than ADP; Hda helps facilitate the conversion of DnaA-ATP to DnaA-ADP. Length = 226

 Score = 80.3 bits (199), Expect = 1e-15
 Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 22/180 (12%)

Query: 164 FSTFIEGSSNRVALTAAQSIAEVDSHGYTTVRLNPLFIHASVGLGKTHLLQAIANASIKR 223
           F  F  G  N   L A + +A              L++    G GK+HLLQA   A+ +R
Sbjct: 14  FDNFYAGG-NAELLAALRQLAAGKGD-------RFLYLWGESGSGKSHLLQAACAAAEER 65

Query: 224 QPNLRVVYLTAEYFMWRFASAIRDNCALNLKDSLRNIDLLLIDDMQFLQG-KLIQHEFCH 282
                 +YL           A        + + L   DL+ +DD++ + G    Q    H
Sbjct: 66  G--KSAIYLPL---------AELAQADPEVLEGLEQADLVCLDDVEAIAGQPEWQEALFH 114

Query: 283 LLNSLLDSAKQVVAAADRPPSELESLDPRIRSRLQGGVSVPL-GLHDYEMRFSILKNRLA 341
           L N + ++  +++ A    P++L    P +R+RL  G+   L  L D E + + L++R A
Sbjct: 115 LYNRVREAGGRLLIAGRAAPAQLPLRLPDLRTRLAWGLVFQLPPLSDEE-KIAALQSRAA 173