HHsearch alignment for GI: 254780628 and conserved domain: COG1060

>COG1060 ThiH Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes [Coenzyme metabolism / General function prediction only].
Probab=99.09  E-value=8.5e-09  Score=78.41  Aligned_cols=212  Identities=14%  Similarity=0.196  Sum_probs=133.4

Q ss_pred             CCEEEEEECCC---CCCCCCCCCCEEEECCCCCCHHHHH---HHHHHHHHHHHHHHCCCEEEEEE-ECCCCCCCCCHHHH
Q ss_conf             85499994065---1183765773024578866288999---99999999998761895058999-62888887899999
Q gi|254780628|r   17 NSLGVYVHWPF---CVKKCPYCDFNSHVRRYKVGQENFI---QSFLTEMQWMRQLTGPRSISSIF-FGGGTPSLIEPQNI   89 (395)
Q Consensus        17 ~~l~lYihiPF---C~~~C~yC~f~~~~~~~~~~~~~y~---~~l~~Ei~~~~~~~~~~~~~~iy-~GGGTPs~l~~~~l   89 (395)
T Consensus        55 vtyv~n~~in~TN~C~~~C~fCaF~~~~-~~~---~~y~Ls~eeI~~~~~~~~~~-G---~~Evli~gG~~p~-~~~~y~  125 (370)
T COG1060          55 VTYVVNRNINYTNICVNDCTFCAFYRKP-GDP---KAYTLSPEEILEEVREAVKR-G---ITEVLIVGGEHPE-LSLEYY  125 (370)
T ss_pred             EEEEEEECCCCCHHHCCCCCCCCCCCCC-CCC---CCCCCCHHHHHHHHHHHHHC-C---CEEEEEECCCCCC-CCHHHH
T ss_conf             7999752578532331799726234578-886---55316999999999999875-9---8699980576877-436799


Q ss_pred             HHHHHHHHHCCCCCCCC-------CCCCCCCCCCCH-HHHHHHHHHCCCCCEEE-ECCCCCCHHHHHHH-CCCCCHHHHH
Q ss_conf             99997664047644433-------211332104100-23477663034541143-23433201345542-2443134789
Q gi|254780628|r   90 ALILDGIAKNWTVSSNV-------EITIEANPSSVE-VNNFQGYRKAGVNRISL-GVQSLEEQSLRFLG-RNHNASEAIA  159 (395)
Q Consensus        90 ~~ll~~i~~~~~~~~~~-------e~t~E~~P~~~~-~~~l~~l~~~Gv~RiS~-GvQs~~~~~l~~~~-R~~~~~~~~~  159 (395)
T Consensus       126 ~~~~~~ik~~~p--~~~i~a~s~~ei~~~~~~~~~s~~E~l~~Lk~aGldsmpg~~aeil~e~vr~~~~p~K~~~~~wle  203 (370)
T COG1060         126 EELFRTIKEEFP--DLHIHALSAGEILFLAREGGLSYEEVLKRLKEAGLDSMPGGGAEILSEEVRKIHCPPKKSPEEWLE  203 (370)
T ss_pred             HHHHHHHHHHCC--CHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHCCCCCCHHHHHH
T ss_conf             999999988573--034301678886798743688899999999976987674754114167799863798899999999


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC--C-EEEEEEEEECC-CEEHHHHHCCCCCCCHHHHHHHH
Q ss_conf             99986302444333210002585432211127887531800--1-23464688259-60001454498021103567889
Q gi|254780628|r  160 AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD--H-LSLYQLTIEKG-TLFYKMHKDGDLVLPSENVAVDL  235 (395)
Q Consensus       160 ~~~~~~~~~~~v~iDli~GlPgqt~e~~~~~l~~~~~l~p~--~-is~Y~l~i~~~-t~l~~~~~~~~~~~p~~~~~~~~  235 (395)
T Consensus       204 ~~~~Ah~lGI~~tatml~Gh-~E~~ed~~~hl~~ir~lQ~~~gg~~~fI~~~f~p~~~~--~~--~~~~~~~~~~~~l~~  278 (370)
T COG1060         204 IHERAHRLGIPTTATMLLGH-VETREDRIDHLEHIRDLQDETGGFQEFIPLRFRPENGP--LP--AEVVPEASLEQDLKA  278 (370)
T ss_pred             HHHHHHHCCCCCCCEEEEEE-CCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCC--CC--CCCCCCCCHHHHHHH
T ss_conf             99999976998420347873-28889999999999999998589579980554578887--66--667898998999999


Q ss_pred             HHHHHHHHH
Q ss_conf             998655788
Q gi|254780628|r  236 YNLTQSITS  244 (395)
Q Consensus       236 ~~~a~e~L~  244 (395)
T Consensus       279 iAiaRi~l~  287 (370)
T COG1060         279 IALARIFLD  287 (370)
T ss_pred             HHHHHHHCC
T ss_conf             999999706