HHsearch alignment for GI: 254780628 and conserved domain: COG1060
>COG1060 ThiH Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes [Coenzyme metabolism / General function prediction only].
Probab=99.09 E-value=8.5e-09 Score=78.41 Aligned_cols=212 Identities=14% Similarity=0.196 Sum_probs=133.4
Q ss_pred CCEEEEEECCC---CCCCCCCCCCEEEECCCCCCHHHHH---HHHHHHHHHHHHHHCCCEEEEEE-ECCCCCCCCCHHHH
Q ss_conf 85499994065---1183765773024578866288999---99999999998761895058999-62888887899999
Q gi|254780628|r 17 NSLGVYVHWPF---CVKKCPYCDFNSHVRRYKVGQENFI---QSFLTEMQWMRQLTGPRSISSIF-FGGGTPSLIEPQNI 89 (395)
Q Consensus 17 ~~l~lYihiPF---C~~~C~yC~f~~~~~~~~~~~~~y~---~~l~~Ei~~~~~~~~~~~~~~iy-~GGGTPs~l~~~~l 89 (395)
T Consensus 55 vtyv~n~~in~TN~C~~~C~fCaF~~~~-~~~---~~y~Ls~eeI~~~~~~~~~~-G---~~Evli~gG~~p~-~~~~y~ 125 (370)
T COG1060 55 VTYVVNRNINYTNICVNDCTFCAFYRKP-GDP---KAYTLSPEEILEEVREAVKR-G---ITEVLIVGGEHPE-LSLEYY 125 (370)
T ss_pred EEEEEEECCCCCHHHCCCCCCCCCCCCC-CCC---CCCCCCHHHHHHHHHHHHHC-C---CEEEEEECCCCCC-CCHHHH
T ss_conf 7999752578532331799726234578-886---55316999999999999875-9---8699980576877-436799
Q ss_pred HHHHHHHHHCCCCCCCC-------CCCCCCCCCCCH-HHHHHHHHHCCCCCEEE-ECCCCCCHHHHHHH-CCCCCHHHHH
Q ss_conf 99997664047644433-------211332104100-23477663034541143-23433201345542-2443134789
Q gi|254780628|r 90 ALILDGIAKNWTVSSNV-------EITIEANPSSVE-VNNFQGYRKAGVNRISL-GVQSLEEQSLRFLG-RNHNASEAIA 159 (395)
Q Consensus 90 ~~ll~~i~~~~~~~~~~-------e~t~E~~P~~~~-~~~l~~l~~~Gv~RiS~-GvQs~~~~~l~~~~-R~~~~~~~~~ 159 (395)
T Consensus 126 ~~~~~~ik~~~p--~~~i~a~s~~ei~~~~~~~~~s~~E~l~~Lk~aGldsmpg~~aeil~e~vr~~~~p~K~~~~~wle 203 (370)
T COG1060 126 EELFRTIKEEFP--DLHIHALSAGEILFLAREGGLSYEEVLKRLKEAGLDSMPGGGAEILSEEVRKIHCPPKKSPEEWLE 203 (370)
T ss_pred HHHHHHHHHHCC--CHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHCCCCCCHHHHHH
T ss_conf 999999988573--034301678886798743688899999999976987674754114167799863798899999999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC--C-EEEEEEEEECC-CEEHHHHHCCCCCCCHHHHHHHH
Q ss_conf 99986302444333210002585432211127887531800--1-23464688259-60001454498021103567889
Q gi|254780628|r 160 AIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD--H-LSLYQLTIEKG-TLFYKMHKDGDLVLPSENVAVDL 235 (395)
Q Consensus 160 ~~~~~~~~~~~v~iDli~GlPgqt~e~~~~~l~~~~~l~p~--~-is~Y~l~i~~~-t~l~~~~~~~~~~~p~~~~~~~~ 235 (395)
T Consensus 204 ~~~~Ah~lGI~~tatml~Gh-~E~~ed~~~hl~~ir~lQ~~~gg~~~fI~~~f~p~~~~--~~--~~~~~~~~~~~~l~~ 278 (370)
T COG1060 204 IHERAHRLGIPTTATMLLGH-VETREDRIDHLEHIRDLQDETGGFQEFIPLRFRPENGP--LP--AEVVPEASLEQDLKA 278 (370)
T ss_pred HHHHHHHCCCCCCCEEEEEE-CCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCC--CC--CCCCCCCCHHHHHHH
T ss_conf 99999976998420347873-28889999999999999998589579980554578887--66--667898998999999
Q ss_pred HHHHHHHHH
Q ss_conf 998655788
Q gi|254780628|r 236 YNLTQSITS 244 (395)
Q Consensus 236 ~~~a~e~L~ 244 (395)
T Consensus 279 iAiaRi~l~ 287 (370)
T COG1060 279 IALARIFLD 287 (370)
T ss_pred HHHHHHHCC
T ss_conf 999999706