HHsearch alignment for GI: 254780628 and conserved domain: COG2238
>COG2238 RPS19A Ribosomal protein S19E (S16A) [Translation, ribosomal structure and biogenesis].
Probab=94.92 E-value=0.044 Score=33.95 Aligned_cols=57 Identities=19% Similarity=0.381 Sum_probs=41.7
Q ss_pred HHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCEEEECHHHHHHHHHHHHHHC
Q ss_conf 62379988899988389964999999998799498559899995675898999999861
Q gi|254780628|r 336 RLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394 (395)
Q Consensus 336 R~~~Gid~~~~~~~fg~~~~~~~~~~L~~~Gli~~~~~~~l~lT~~G~~~~d~I~~~l~ 394 (395)
T Consensus 80 ~k~rG~rP~~~~~gsg-sI~RkilqqLE~~G~V~k~~~GR-~ltp~GrsllD~~a~ei~ 136 (147)
T COG2238 80 RKNRGSRPEKFRKGSG-SIIRKVLQQLEKAGLVEKTPKGR-VLTPKGRSLLDRIATEIK 136 (147)
T ss_pred CCCCCCCCHHHHCCCC-HHHHHHHHHHHHCCCEEECCCCC-EECCCCHHHHHHHHHHHH
T ss_conf 6668889434423773-69999999999778565268986-508130658999999999