HHsearch alignment for GI: 254780628 and conserved domain: PRK00955
>PRK00955 hypothetical protein; Provisional.
Probab=97.35 E-value=0.0053 Score=40.06 Aligned_cols=194 Identities=15% Similarity=0.153 Sum_probs=112.9
Q ss_pred EEEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEE-EECCCCC----------------
Q ss_conf 49999406511837657730245788662889999999999999876189505899-9628888----------------
Q gi|254780628|r 19 LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSI-FFGGGTP---------------- 81 (395)
Q Consensus 19 l~lYihiPFC~~~C~yC~f~~~~~~~~~~~~~y~~~l~~Ei~~~~~~~~~~~~~~i-y~GGGTP---------------- 81 (395)
T Consensus 293 fSit~hR-GCfGgCsFCaIt~HQGr~I~--sRS~~SIl~E~~~~~~~-p~FkG-~IsDvGGPTANmy~~~C~~~~~~g~C 367 (599)
T PRK00955 293 FSITSHR-GCFGGCSFCAITFHQGRFIQ--SRSKESILREAKELTQM-PDFKG-YIHDVGGPTANFRKMACKKQEKCGAC 367 (599)
T ss_pred HEEEECC-CCCCCCCCCCCCCCCCCCEE--ECCHHHHHHHHHHHHHC-CCCCE-EECCCCCCCHHHCCCCCCCHHHCCCC
T ss_conf 3010247-62567821022011787034--44889999999999738-89877-87138982465430647980202889
Q ss_pred --------CCC-----CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC----CHHHHHHHHHHCCC-CCEEEECCCCCCH
Q ss_conf --------878-----99999999976640476444332113321041----00234776630345-4114323433201
Q gi|254780628|r 82 --------SLI-----EPQNIALILDGIAKNWTVSSNVEITIEANPSS----VEVNNFQGYRKAGV-NRISLGVQSLEEQ 143 (395)
Q Consensus 82 --------s~l-----~~~~l~~ll~~i~~~~~~~~~~e~t~E~~P~~----~~~~~l~~l~~~Gv-~RiS~GvQs~~~~ 143 (395)
T Consensus 368 ~~~~Cl~P~~C~nL~~dh~~~~~LLrk~r~lpgVKkv-fi~SGiRyDl~l~d~~~~yl~eL~~~HvsGqLKVAPEH~~~~ 446 (599)
T PRK00955 368 KNKQCLFPKPCKNLDVDHTEYLDLLRKVRKLPGVKKV-FIRSGIRYDYLLHDKNDEFFKELCEHHVSGQLKVAPEHISDR 446 (599)
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEE-EECCHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCCCHH
T ss_conf 9967899988889878838999999998548997677-741226555551368869999999770787067577546837
Q ss_pred HHHHHHCCC--CCHHHHHHHHHHH-CCCCC--CCCCCCCCCCCCCCCCCCCCHHHHHHC--CCCCEEEEEEEEECCCEEH
Q ss_conf 345542244--3134789999863-02444--333210002585432211127887531--8001234646882596000
Q gi|254780628|r 144 SLRFLGRNH--NASEAIAAIHLAR-NIFPR--MSFDLIYALPKQTMTQWEMELQRALSY--AVDHLSLYQLTIEKGTLFY 216 (395)
Q Consensus 144 ~l~~~~R~~--~~~~~~~~~~~~~-~~~~~--v~iDli~GlPgqt~e~~~~~l~~~~~l--~p~~is~Y~l~i~~~t~l~ 216 (395)
T Consensus 447 VL~~M~KP~~~~~~~F~~~F~~~~k~~Gk~QylvPY~issHPGct~~dm~~La~~lk~~~~~peQVQd--F~PTP~T~sT 524 (599)
T PRK00955 447 VLKYMGKPSREVYDKFVKKFDRINKKLGKKQFLVPYLMSSHPGSTLEDAIELAEYLKDLGYQPEQVQD--FYPTPGTLST 524 (599)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHCEE--EECCCCHHHH
T ss_conf 88974799818999999999999998589730477788169998999999999999973999777311--0078518988
Q ss_pred HHHH
Q ss_conf 1454
Q gi|254780628|r 217 KMHK 220 (395)
Q Consensus 217 ~~~~ 220 (395)
T Consensus 525 ~MYy 528 (599)
T PRK00955 525 TMYY 528 (599)
T ss_pred HHHH
T ss_conf 8988