HHsearch alignment for GI: 254780628 and conserved domain: PRK07360
>PRK07360 FO synthase subunit 2; Reviewed.
Probab=99.11 E-value=1.9e-09 Score=82.80 Aligned_cols=218 Identities=14% Similarity=0.186 Sum_probs=135.8
Q ss_pred CEEEEEECCC---CCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEE-ECCCCCCC----CCHHHH
Q ss_conf 5499994065---118376577302457886628899999999999998761895058999-62888887----899999
Q gi|254780628|r 18 SLGVYVHWPF---CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIF-FGGGTPSL----IEPQNI 89 (395)
Q Consensus 18 ~l~lYihiPF---C~~~C~yC~f~~~~~~~~~~~~~y~~~l~~Ei~~~~~~~~~~~~~~iy-~GGGTPs~----l~~~~l 89 (395)
T Consensus 57 tfv~n~~In~TNiC~~~C~fCaF~r~p~~~~----ay~ls~-eEi~~~~~~a~~~G~tEv~~~gG~~P~l~~~~~~~~~y 131 (375)
T PRK07360 57 TYVVNRNINFTNICEGHCGFCAFRRDKGDPG----AFWLDI-EEILEKAAEAVKAGATEVCIQGGLHPAADLNGSSLDFY 131 (375)
T ss_pred EEEEEECCCHHHHHHCCCCCCCCCCCCCCCC----CEECCH-HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHH
T ss_conf 9982526656179870898273407889976----602789-99999999998658808997688783445464518999
Q ss_pred HHHHHHHHHCCCCCCC-----CCCCCCC-CCCCCHHHHHHHHHHCCCCCE-EEECCCCCCHHHHHHHCC-CCCHHHHHHH
Q ss_conf 9999766404764443-----3211332-104100234776630345411-432343320134554224-4313478999
Q gi|254780628|r 90 ALILDGIAKNWTVSSN-----VEITIEA-NPSSVEVNNFQGYRKAGVNRI-SLGVQSLEEQSLRFLGRN-HNASEAIAAI 161 (395)
Q Consensus 90 ~~ll~~i~~~~~~~~~-----~e~t~E~-~P~~~~~~~l~~l~~~Gv~Ri-S~GvQs~~~~~l~~~~R~-~~~~~~~~~~ 161 (395)
T Consensus 132 ~~~~~~ik~~~p~i~i~a~s~~Ei~~~a~~~g~~~~e~l~~LkeAGl~s~pG~gaEil~~~vr~~i~P~K~~~~~wl~v~ 211 (375)
T PRK07360 132 LEILKAIKAEFPGIHLHAFSPQEVQFAAREDGLSYEEVLKALKDAGLDSMPGTAAEILDDEVRRIICPEKITTAEWIEIV 211 (375)
T ss_pred HHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHH
T ss_conf 99999999868985564089999999886649988999999997698758887621034556646598988999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC--CCEEEE-EEEEE-CCCEEHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 98630244433321000258543221112788753180--012346-46882-596000145449802110356788999
Q gi|254780628|r 162 HLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAV--DHLSLY-QLTIE-KGTLFYKMHKDGDLVLPSENVAVDLYN 237 (395)
Q Consensus 162 ~~~~~~~~~v~iDli~GlPgqt~e~~~~~l~~~~~l~p--~~is~Y-~l~i~-~~t~l~~~~~~~~~~~p~~~~~~~~~~ 237 (395)
T Consensus 212 ~~Ah~lGi~ttatmL~Gh~-Et~eerv~hL~~iR~lqd~tggf~efIp~~F~~~nt~l~~~~~~~-~~~~~~e-~lk~~A 288 (375)
T PRK07360 212 KTAHKLGLPTTSTMMYGHI-ETPEHRIDHLSILREIQKETGGITEFIPLPFVHENAPLYERGRVK-RGAPGLE-DLKLYA 288 (375)
T ss_pred HHHHHCCCCCCEEEECCCC-CCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCC-CCCCHHH-HHHHHH
T ss_conf 9999829970100261898-999999999999998887449846997114358998500015678-8886698-999999
Q ss_pred HHHHHH
Q ss_conf 865578
Q gi|254780628|r 238 LTQSIT 243 (395)
Q Consensus 238 ~a~e~L 243 (395)
T Consensus 289 vaRl~L 294 (375)
T PRK07360 289 VSRIFL 294 (375)
T ss_pred HHHHHH
T ss_conf 999983