HHsearch alignment for GI: 254780628 and conserved domain: PRK08444

Probab=99.08  E-value=4.1e-09  Score=80.53  Aligned_cols=216  Identities=10%  Similarity=0.159  Sum_probs=139.7

Q ss_pred             CEEEEEECCC---CCCCCCCCCCEEEECCCCCCHHHHH---HHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHH
Q ss_conf             5499994065---1183765773024578866288999---999999999987618950589996288888789999999
Q gi|254780628|r   18 SLGVYVHWPF---CVKKCPYCDFNSHVRRYKVGQENFI---QSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIAL   91 (395)
Q Consensus        18 ~l~lYihiPF---C~~~C~yC~f~~~~~~~~~~~~~y~---~~l~~Ei~~~~~~~~~~~~~~iy~GGGTPs~l~~~~l~~   91 (395)
T Consensus        46 tfv~n~~IN~TNiC~~~C~FCaF~r~~~~~----~aY~ls~eei~~~~~ea~~-~G~tev--~i~GG~~P~-~~~eyY~~  117 (353)
T PRK08444         46 YFNINRHINPTNICADVCKFCAFSAHRKNP----NPYTMSHEEILEIVKESVK-RGIKEV--HIVSAHNPN-YGYQWYLE  117 (353)
T ss_pred             EEEECCCCCCCCCCCCCCCCCCCCCCCCCC----CCEECCHHHHHHHHHHHHH-CCCCEE--EEECCCCCC-CCHHHHHH
T ss_conf             998205745664456888567561689999----8766699999999999997-598789--981475989-97588999


Q ss_pred             HHHHHHHCCCCCCCCCCC-CC----CCCCCC-HHHHHHHHHHCCCCCEE-EECCCCCCHHHHHHHCCC-CCHHHHHHHHH
Q ss_conf             997664047644433211-33----210410-02347766303454114-323433201345542244-31347899998
Q gi|254780628|r   92 ILDGIAKNWTVSSNVEIT-IE----ANPSSV-EVNNFQGYRKAGVNRIS-LGVQSLEEQSLRFLGRNH-NASEAIAAIHL  163 (395)
Q Consensus        92 ll~~i~~~~~~~~~~e~t-~E----~~P~~~-~~~~l~~l~~~Gv~RiS-~GvQs~~~~~l~~~~R~~-~~~~~~~~~~~  163 (395)
T Consensus       118 l~r~ik~~~P~i~i~aft~~EI~~~a~~~~~s~~evL~~Lk~AGL~slpGggAEIl~d~VR~~I~p~K~~~~~Wl~i~~~  197 (353)
T PRK08444        118 IFKMIKEAYPNLHVKAMTAAEVDFLSRKFGKSYEEVLEDMLEYGVDSMPGGGAEIFDEEVRKKICKGKVSSERWLEIHKY  197 (353)
T ss_pred             HHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf             99999985885047717789999999980999999999999819875789872003777897618998999999999999


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC--EEE-EEEEEE-CCCEEHHHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf             63024443332100025854322111278875318001--234-646882-59600014544980211035678899986
Q gi|254780628|r  164 ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDH--LSL-YQLTIE-KGTLFYKMHKDGDLVLPSENVAVDLYNLT  239 (395)
Q Consensus       164 ~~~~~~~v~iDli~GlPgqt~e~~~~~l~~~~~l~p~~--is~-Y~l~i~-~~t~l~~~~~~~~~~~p~~~~~~~~~~~a  239 (395)
T Consensus       198 AH~lGi~ttaTmmyGh-vEt~e~rv~HL~~lR~lQd~tgGF~~FIPl~f~~~~t~l~~~------~~~t~~e~Lr~~Ais  270 (353)
T PRK08444        198 WHKKGKQSNATMLFGH-IENREHRIDHMLRLRDLQDKTGGFNAFIPLVYQRENNYLKVE------KFPSSQEILKTIAIS  270 (353)
T ss_pred             HHHCCCCCCEEEECCC-CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCC------CCCCHHHHHHHHHHH
T ss_conf             9982996641467788-799999999999999836557983589765657899857778------999989999999999


Q ss_pred             HHHHHHCCCCC
Q ss_conf             55788709624
Q gi|254780628|r  240 QSITSAHGLHA  250 (395)
Q Consensus       240 ~e~L~~~GY~~  250 (395)
T Consensus       271 Rl~L-d-ni~~  279 (353)
T PRK08444        271 RILL-D-NIPH  279 (353)
T ss_pred             HHHH-C-CCCC
T ss_conf             9986-3-8786