HHsearch alignment for GI: 254780628 and conserved domain: PRK08446
>PRK08446 coproporphyrinogen III oxidase; Provisional.
Probab=100.00 E-value=0 Score=683.77 Aligned_cols=347 Identities=32% Similarity=0.503 Sum_probs=311.3
Q ss_pred EEEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHH-HHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH
Q ss_conf 499994065118376577302457886628899999999999998-7618950589996288888789999999997664
Q gi|254780628|r 19 LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMR-QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIA 97 (395)
Q Consensus 19 l~lYihiPFC~~~C~yC~f~~~~~~~~~~~~~y~~~l~~Ei~~~~-~~~~~~~~~~iy~GGGTPs~l~~~~l~~ll~~i~ 97 (395)
T Consensus 1 ~~LYiHiPFC~~~C~YCdF~~~~~~~~-~~~~Y~~aL~~Ei~~~~~~~~~~~~i~tiy~GGGTPS~l~~~~l~~ll~~l~ 79 (351)
T PRK08446 1 MLLYIHIPFCESKCGYCAFNSYEDKFD-LKEEYFQALCLDLKFQLKQFIQDEKIESVFIGGGTPSTVSAKLYEPIFEIIY 79 (351)
T ss_pred CEEEEECCCCCCCCCCCCCCCEECCCC-CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHCCHHHHHHHHHHHH
T ss_conf 978998178388089997928517956-7999999999999999876268993669996897456379999999999999
Q ss_pred HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCC-CCCCCCCCC
Q ss_conf 0476444332113321041002347766303454114323433201345542244313478999986302-444333210
Q gi|254780628|r 98 KNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLI 176 (395)
Q Consensus 98 ~~~~~~~~~e~t~E~~P~~~~~~~l~~l~~~Gv~RiS~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~-~~~v~iDli 176 (395)
T Consensus 80 ~~~--~~~~EiTiE~nP~~~~~~~l~~l~~~GvNRiSiGVQSf~d~~Lk~lgR~H~~~~~~~ai~~~r~~gf~niniDLI 157 (351)
T PRK08446 80 PYL--SKDCEITTEANPNSATLAWLKGMKNLGVNRISFGVQSFHEDKLKFLGRIHSKNQIIKAIENAKKAGFKNISIDLI 157 (351)
T ss_pred HHC--CCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEECHHHH
T ss_conf 766--988359997676868999999998649876999731376899998189988999999999999849963422553
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
Q ss_conf 00258543221112788753180012346468825960001454498021103567889998655788709624236743
Q gi|254780628|r 177 YALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNH 256 (395)
Q Consensus 177 ~GlPgqt~e~~~~~l~~~~~l~p~~is~Y~l~i~~~t~l~~~~~~~~~~~p~~~~~~~~~~~a~e~L~~~GY~~Yeis~f 256 (395)
T Consensus 158 yGlP~Qt~e~~~~~l~~~~~l~p~HiS~Y~L~ie~~T~~~~~~~~~~----~~---~~~~~~~~~~L~~~Gy~~YEiSnf 230 (351)
T PRK08446 158 YNTKLDNKKLLKEELKLAKELPITHLSAYALTIEENTPFEEKNAKKK----DD---ENLAKFVREQLEEFGFKQYEVSNF 230 (351)
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCCEEECCCCEECCCCHHHHCCCCCC----CH---HHHHHHHHHHHHHCCCCCCCHHHH
T ss_conf 17999999999999999974896979742304469982332567899----75---999999999999769974324443
Q ss_pred HHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCC-EEECCHHHHHHHHHHHHH
Q ss_conf 4310110133211244412320432001157886157865424702577877538963332-245499998999999965
Q gi|254780628|r 257 SFLGAESLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNGHAVVE-KEFLSSEQQADEFLMMGL 335 (395)
Q Consensus 257 ak~~~~s~hn~~Yw~~~d~iG~G~GA~S~l~~~~~~~~~~~~~~~~~Y~~~i~~~~~p~~~-~~~Ls~~e~~~e~l~~~L 335 (395)
T Consensus 231 Ak-g~~s~HN~~YW~~~~ylG~G~gA~s~~~~----~R~~N~~~~~~Yi~~------~~~~~~e~Ls~~~~~~E~lmlgL 299 (351)
T PRK08446 231 GK-NYQCKHNLGYWQGKDYLGCGAGAVGFIAN----KRFYAAKDLENYIKN------PLFRSIETLSEEDLRLEKLFLGL 299 (351)
T ss_pred CC-CCCCCCCCCCCCCCCEEEECCCCCEECCC----EEEECCCCHHHHHHC------CCCCCEEECCHHHHHHHHHHHHH
T ss_conf 14-66544355754698579982462330699----878767999999827------31055534888689999999866
Q ss_pred HHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCEEEECHHHHHHHHHHHHHHC
Q ss_conf 62379988899988389964999999998799498559899995675898999999861
Q gi|254780628|r 336 RLREGISVKDWEMLAGRNLDIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA 394 (395)
Q Consensus 336 R~~~Gid~~~~~~~fg~~~~~~~~~~L~~~Gli~~~~~~~l~lT~~G~~~~d~I~~~l~ 394 (395)
T Consensus 300 R~~~Gi~l~~~~~~~~~-----~~~~l~~~~~~~-~~~~--rlt~~g~~lad~ia~~~l 350 (351)
T PRK08446 300 RSIVGVDLSLLDEKQLQ-----KAKILLKEKKLF-IKNG--RLFNKNFFLADEIALYLL 350 (351)
T ss_pred HCCCCCCHHHHHHHHHH-----HHHHHHHCCCEE-EECC--EEEECCCEEHHHHHHHHH
T ss_conf 55279898998388889-----999999679879-5789--884278076689999972