HHsearch alignment for GI: 254780628 and conserved domain: PRK11512
>PRK11512 DNA-binding transcriptional repressor MarR; Provisional.
Probab=93.75 E-value=0.61 Score=26.38 Aligned_cols=68 Identities=15% Similarity=0.239 Sum_probs=52.4
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHH--HHHHHHHHHCCCEEEEE--CC----EEEECHHHHHHHHHHHH
Q ss_conf 49999899999996562379988899988389964--99999999879949855--98----99995675898999999
Q gi|254780628|r 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQ--FS----RLRCTQRGMTMLDSVIA 391 (395)
Q Consensus 321 Ls~~e~~~e~l~~~LR~~~Gid~~~~~~~fg~~~~--~~~~~~L~~~Gli~~~~--~~----~l~lT~~G~~~~d~I~~ 391 (395)
T Consensus 38 Lt~~Q~---~vL~~L~~~~~~t~~eLa~~l~id~~tvt~~ldrLe~~GlI~R~~~p~DrR~~~v~LT~~G~~l~~~~~~ 113 (144)
T PRK11512 38 ITAAQF---KVLCSIRCAACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTTSGAAICEQCHQ 113 (144)
T ss_pred CCHHHH---HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECHHHHHHHHHHHH
T ss_conf 999999---9999999869979999999978888789999999997879663579877624787889779999999999