HHsearch alignment for GI: 254780628 and conserved domain: PRK12928

Probab=98.20  E-value=5.6e-06  Score=59.75  Aligned_cols=212  Identities=13%  Similarity=0.153  Sum_probs=123.5

Q ss_pred             EEEEEECCCCCCCCCCCCCEEEECCCCCCHH-HHHHHHHHHHHHHHHHHCCCEEEEEE-----ECCCCCCCCCHHHHHHH
Q ss_conf             4999940651183765773024578866288-99999999999998761895058999-----62888887899999999
Q gi|254780628|r   19 LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQE-NFIQSFLTEMQWMRQLTGPRSISSIF-----FGGGTPSLIEPQNIALI   92 (395)
Q Consensus        19 l~lYihiPFC~~~C~yC~f~~~~~~~~~~~~-~y~~~l~~Ei~~~~~~~~~~~~~~iy-----~GGGTPs~l~~~~l~~l   92 (395)
T Consensus        61 ATFMIlGd~CTR~C~FC~V~tg~P~~lD~~EP~rvA~av~~m~-----LkyvVITSV~RDDL~DgG-------A~hfa~~  128 (290)
T PRK12928         61 ATFLLMGSICTRRCAFCQVAKGRPMPLDPDEPERVAEAVAALG-----LRYVVLTSVARDDLPDGG-------AAHFVAT  128 (290)
T ss_pred             CEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC-----CCEEEEEEECCCCCCCCC-------HHHHHHH
T ss_conf             2899667863548985155379989898034799999999838-----976898412367886645-------2999999


Q ss_pred             HHHHHHCCCCCCCCCCCCCC-CCCCCH-HH-HHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCC
Q ss_conf             97664047644433211332-104100-23-4776630345411432343320134554224431347899998630244
Q gi|254780628|r   93 LDGIAKNWTVSSNVEITIEA-NPSSVE-VN-NFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP  169 (395)
Q Consensus        93 l~~i~~~~~~~~~~e~t~E~-~P~~~~-~~-~l~~l~~~Gv~RiS~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~  169 (395)
T Consensus       129 I~~Ir~~~P-----~~~iEvLiPDF~G~~~~al~~v~~a~pdV~nHNiETV~-rL~~~VRp~A~Y~rSL~vL~~ak~~~~  202 (290)
T PRK12928        129 IAAIRARNP-----GTGIEVLTPDFWGGVARALATVLAAKPDCFNHNLETVP-RLQKAVRRGADYQRSLDLLARAKELAP  202 (290)
T ss_pred             HHHHHHHCC-----CCEEEEECHHHCCCHHHHHHHHHHCCCHHHHCCCCCCH-HHCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf             999984599-----86799707111368789999998468546545501204-317124885508999999999997388


Q ss_pred             CC--CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf             43--3321000258543221112788753180012346468825960001454498021103567889998655788709
Q gi|254780628|r  170 RM--SFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG  247 (395)
Q Consensus       170 ~v--~iDli~GlPgqt~e~~~~~l~~~~~l~p~~is~Y~l~i~~~t~l~~~~~~~~~~~p~~~~~~~~~~~a~e~L~~~G  247 (395)
T Consensus       203 ~i~TKSgiMvGL-GEt~eEv~~~~~DLr~~gvdilTiGQYL-~P-s~--~h~pV~ryv~P~------eF~~~~~~a~~~G  271 (290)
T PRK12928        203 GIPTKSGLMLGL-GETEDEVIETLRDLRAVDCDRLTIGQYL-RP-SL--AHLPVQRYWTPE------EFEALGQIARELG  271 (290)
T ss_pred             CCEEEEEEEEEC-CCCHHHHHHHHHHHHHCCCCEEEECCCC-CC-CC--CCCCCEECCCHH------HHHHHHHHHHHCC
T ss_conf             852413458860-5889999999999998199899824025-88-86--668833356989------9999999999769


Q ss_pred             CCCCCCCCHHHH
Q ss_conf             624236743431
Q gi|254780628|r  248 LHAYEISNHSFL  259 (395)
Q Consensus       248 Y~~Yeis~fak~  259 (395)
T Consensus       272 F~~V~SgPlVRS  283 (290)
T PRK12928        272 FKHVRSGPLVRS  283 (290)
T ss_pred             CCEEEECCCCCC
T ss_conf             967983374003