HHsearch alignment for GI: 254780628 and conserved domain: TIGR02493

>TIGR02493 PFLA pyruvate formate-lyase 1-activating enzyme; InterPro: IPR012838 Members of this family are iron-sulphur proteins with a radical-SAM domain. A single glycine residue in 2.3.1.54 from EC, formate C-acetyltransferase (formate-pyruvate lyase), is oxidized to the corresponding radical by transfer of a proton from its CH2 to AdoMet with concomitant cleavage of the latter. The reaction requires Fe2+. The first stage is reduction of the AdoMet to give methionine and the 5'-deoxyadenosin-5-yl radical, which then abstracts a hydrogen radical from the glycine residue .; GO: 0043365 [formate-C-acetyltransferase]-activating enzyme activity.
Probab=97.91  E-value=0.00018  Score=49.77  Aligned_cols=209  Identities=12%  Similarity=0.191  Sum_probs=131.0

Q ss_pred             EEEEEECCCCCCCCCCCCCEEEECCC-CCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH
Q ss_conf             49999406511837657730245788-66288999999999999987618950589996288888789999999997664
Q gi|254780628|r   19 LGVYVHWPFCVKKCPYCDFNSHVRRY-KVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIA   97 (395)
Q Consensus        19 l~lYihiPFC~~~C~yC~f~~~~~~~-~~~~~~y~~~l~~Ei~~~~~~~~~~~~~~iy~GGGTPs~l~~~~l~~ll~~i~   97 (395)
T Consensus        16 ~RFvvFmqGC~lRC~YCh-NPDTW~~~~~G~~~t~~el~~e~~~yk~f~~~s-GGGvT~SGGEP-llQ~~F~~~~f~~cK   92 (243)
T TIGR02493        16 IRFVVFMQGCPLRCQYCH-NPDTWDLKKGGTEVTVEELIKEVKSYKDFFKAS-GGGVTVSGGEP-LLQPEFVLELFKACK   92 (243)
T ss_pred             CEEEEEECCHHHHHHHCC-CCCCCCCCCCCCEECHHHHHHHHHHHHHHHHCC-CCCEEEECCCC-CCCHHHHHHHHHHHH
T ss_conf             068775435367753058-987433588781207899999999899887207-99589868950-201699999999999


Q ss_pred             HCCCCCCCCCCCCCCCCC---CCH--HHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCC--
Q ss_conf             047644433211332104---100--2347766303454114323433201345542244313478999986302444--
Q gi|254780628|r   98 KNWTVSSNVEITIEANPS---SVE--VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--  170 (395)
Q Consensus        98 ~~~~~~~~~e~t~E~~P~---~~~--~~~l~~l~~~Gv~RiS~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~--  170 (395)
T Consensus        93 ~~~GiH----TclDT~GGCftf~~~~~~~~~~lLe~-TDLvLLDiK~~~~~~y~~LTg~~~~~ptl~Fa~~L~~~~kP~W  167 (243)
T TIGR02493        93 KELGIH----TCLDTSGGCFTFLGGFTEAADELLEV-TDLVLLDIKHIDPEKYKKLTGVKSLEPTLEFAKYLAKRNKPIW  167 (243)
T ss_pred             HHCCCE----EEEECCCCHHHHHCCHHHHHHHHHHC-CCEEEEECCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEE
T ss_conf             856983----88744883433412124899975100-5878862343681240001456775245899999996589889


Q ss_pred             ---CCCCCCCCCCCCCCC--CCCCCHHHHHHC-C-CCCEEEEEE---EEECCCEEHHHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf             ---333210002585432--211127887531-8-001234646---882596000145449802110356788999865
Q gi|254780628|r  171 ---MSFDLIYALPKQTMT--QWEMELQRALSY-A-VDHLSLYQL---TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQ  240 (395)
Q Consensus       171 ---v~iDli~GlPgqt~e--~~~~~l~~~~~l-~-p~~is~Y~l---~i~~~t~l~~~~~~~~~~~p~~~~~~~~~~~a~  240 (395)
T Consensus       168 iRYVlV------PGyTD~~eDi~~l~~fv~~~~~averVe~LPYH~LG~~KWe~~g~~Y~L~~~~~p~~e~~~~----~~  237 (243)
T TIGR02493       168 IRYVLV------PGYTDSEEDIEALAEFVKTLPNAVERVEVLPYHQLGVYKWEALGIEYKLEGVKPPNKEQLER----IK  237 (243)
T ss_pred             EEEEEC------CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHH----HH
T ss_conf             999865------88779989999999999746992799865688602110387668975888889879899999----99


Q ss_pred             HHHHH
Q ss_conf             57887
Q gi|254780628|r  241 SITSA  245 (395)
Q Consensus       241 e~L~~  245 (395)
T Consensus       238 ~~~~~  242 (243)
T TIGR02493       238 EIFKE  242 (243)
T ss_pred             HHHHC
T ss_conf             99732