HHsearch alignment for GI: 254780628 and conserved domain: TIGR03365
>TIGR03365 Bsubt_queE 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. This uncharacterized enzyme, designated QueE, participates in the biosynthesis, from GTP, of 7-cyano-7-deazaguanosine, also called preQ0 because in many species it is a precursor of queuosine. In most Archaea, it is instead the precursor of a different tRNA modified base, archaeosine.
Probab=96.66 E-value=0.0035 Score=41.26 Aligned_cols=100 Identities=18% Similarity=0.277 Sum_probs=57.9
Q ss_pred HHCCCCCC--CEEEEEECCCCCCCCCCCCCE-EEECCCCCC-HHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCC
Q ss_conf 84288988--549999406511837657730-245788662-88999999999999987618950589996288888789
Q gi|254780628|r 10 NMTGQGSN--SLGVYVHWPFCVKKCPYCDFN-SHVRRYKVG-QENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE 85 (395)
Q Consensus 10 ~~~~~~~~--~l~lYihiPFC~~~C~yC~f~-~~~~~~~~~-~~~y~~~l~~Ei~~~~~~~~~~~~~~iy~GGGTPs~l~ 85 (395)
T Consensus 12 SiQGEG~~~G~p~vFvR~~GCnl~C~~CDT~y~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~V~iTGGEPllq- 86 (238)
T TIGR03365 12 TIQGEGMVIGQKTMFVRTGGCDYRCSWCDSLFTWDGSAKDTWRPMTAEEVWQELKAL----GGGTPLHVSLSGGNPALQ- 86 (238)
T ss_pred CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH----CCCCCCEEEECCCCHHHH-
T ss_conf 556788133731899940898986765898876178788775637899999999983----489861899459983444-
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 999999997664047644433211332104100234
Q gi|254780628|r 86 PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNN 121 (395)
Q Consensus 86 ~~~l~~ll~~i~~~~~~~~~~e~t~E~~P~~~~~~~ 121 (395)
T Consensus 87 -~~~~~L~~~l~~-----~g~~v~iETn-Gt~~~~~ 115 (238)
T TIGR03365 87 -KPLGELIDLGKA-----KGYRFALETQ-GSVWQDW 115 (238)
T ss_pred -CCHHHHHHHHHH-----CCCEEEEECC-CCCCCCC
T ss_conf -189999999985-----7984999789-9876000