HHsearch results for GI: 254780628 and protein with PDBid: 2qgq_A
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=99.88 E-value=3.7e-22 Score=165.47 Aligned_cols=185 Identities=19% Similarity=0.284 Sum_probs=135.8
Q ss_pred CCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCC----HHHHHHHHHHHHHCCCCC
Q ss_conf 1183765773024578866288999999999999987618950589996288888789----999999997664047644
Q gi|254780628|r 28 CVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE----PQNIALILDGIAKNWTVS 103 (395)
Q Consensus 28 C~~~C~yC~f~~~~~~~~~~~~~y~~~l~~Ei~~~~~~~~~~~~~~iy~GGGTPs~l~----~~~l~~ll~~i~~~~~~~ 103 (395)
|+.+|+||..+....+ .+.+.++.+++|++.+.+. +...+ +++|..+-+.-. ...+..|+..+.+....
T Consensus 14 C~~~CsFC~ip~~rG~---~rsr~~e~Ii~Ei~~l~~~-G~kei--~l~~~d~~~~~~~~~~~~~~~~L~~~~~~~~~~- 86 (304)
T 2qgq_A 14 CDRGCTFCSIPSFKGS---LRSRSIEDITREVEDLLKE-GKKEI--ILVAQDTTSYGIDLYRKQALPDLLRRLNSLNGE- 86 (304)
T ss_dssp C-------------CC---CCBCCHHHHHHHHHHHHHT-TCCEE--EEECTTGGGTTHHHHSSCCHHHHHHHHHTSSSS-
T ss_pred CCCCCEECEEEEEECC---EEEECHHHHHHHHHHHHHC-CCEEE--EEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCC-
T ss_conf 8998775556201498---3771999999999999986-99099--998564665554244511489999987236883-
Q ss_pred CCCCCC-CCCCCCCCHHHHHHHHHHC--CCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCC--CCCCCCCC
Q ss_conf 433211-3321041002347766303--454114323433201345542244313478999986302444--33321000
Q gi|254780628|r 104 SNVEIT-IEANPSSVEVNNFQGYRKA--GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPR--MSFDLIYA 178 (395)
Q Consensus 104 ~~~e~t-~E~~P~~~~~~~l~~l~~~--Gv~RiS~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~--v~iDli~G 178 (395)
..+. ...+|..++++.+..+.+. ++..+.+|+||+||++|+.|+|.++.+++.++++.+++..+. +..|+|+|
T Consensus 87 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~igieSgs~~vLk~m~r~~t~e~~~~~v~~ir~~~p~~~i~t~fIvG 164 (304)
T 2qgq_A 87 --FWIRVMYLHPDHLTEEIISAMLELDKVVKYFDVPVQHGSDKILKLMGRTKSSEELKKMLSSIRERFPDAVLRTSIIVG 164 (304)
T ss_dssp --CEEEECCCCGGGCCHHHHHHHHHCTTBCCEEECCCBCSCHHHHHHTTCCSCHHHHHHHHHHHHHHCTTCEEEEEEEEC
T ss_pred --EEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEE
T ss_conf --589940358436778877767644846467740643278799987504764555445887676648995576357567
Q ss_pred CCCCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCEEHHHHHC
Q ss_conf 2585432211127887531800123464688259600014544
Q gi|254780628|r 179 LPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKD 221 (395)
Q Consensus 179 lPgqt~e~~~~~l~~~~~l~p~~is~Y~l~i~~~t~l~~~~~~ 221 (395)
+||+|.+++.++++.+.+++++++.++++++.|||+++....+
T Consensus 165 fPgET~edf~~T~~fl~~~~~d~~~i~~~sp~pGT~a~~~~~~ 207 (304)
T 2qgq_A 165 FPGETEEDFEELKQFVEEIQFDKLGAFVYSDEEGTVAFNLKEK 207 (304)
T ss_dssp CTTCCHHHHHHHHHHHHHHCCSEEEEEECCC-----------C
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCCC
T ss_conf 8987689999999999856978330024256699766663678