HHSEARCH alignment of GI: 254780628 and SCOP domain: d1r30a_

Alignment
>d1r30a_ c.1.28.1 (A:) Biotin synthase {Escherichia coli [TaxId: 562]}
Probab=99.71  E-value=6.3e-17  Score=129.24  Aligned_cols=200  Identities=11%  Similarity=0.085  Sum_probs=141.1

Q ss_pred             CCCCCCCCCCCEEEECCCCC-CHHHHHHHHHHHHHHHHHHHCCCEEEEEEE-CCCCC-CCCCHHHHHHHHHHHHHCCCCC
Q ss_conf             51183765773024578866-288999999999999987618950589996-28888-8789999999997664047644
Q gi|254780628|r   27 FCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFF-GGGTP-SLIEPQNIALILDGIAKNWTVS  103 (395)
Q Consensus        27 FC~~~C~yC~f~~~~~~~~~-~~~~y~~~l~~Ei~~~~~~~~~~~~~~iy~-GGGTP-s~l~~~~l~~ll~~i~~~~~~~  103 (395)
                      .|+..|.||+|......... ....-++.+.+|++..... +..   .+++ ||..| .-...+.+.++++.+++.+.  
T Consensus        49 gC~~~C~fC~~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~-G~~---~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~--  122 (312)
T d1r30a_          49 ACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAA-GST---RFCMGAAWKNPHERDMPYLEQMVQGVKAMGL--  122 (312)
T ss_dssp             CBSSCCSSCSCBTTSCTTCCCCCCCCHHHHHHHHHHHHHT-TCS---EEEEEECCSSCCTTTHHHHHHHHHHHHHTTS--
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCE---EEEECCCCCCCCHHHHHHHHHHHHHCCCCCC--
T ss_conf             9888698399876689887642124557899999999974-998---9997057778740668999999985211363--


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf             43321133210410023477663034541143234332013455422443134789999863024443332100025854
Q gi|254780628|r  104 SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT  183 (395)
Q Consensus       104 ~~~e~t~E~~P~~~~~~~l~~l~~~Gv~RiS~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli~GlPgqt  183 (395)
                           .+-.++..++++.++.|+++|++++.+|++|.+ +.+..+...++.++..++++.+++++..++..+|+|+ ++|
T Consensus       123 -----~~~~~~~~l~~e~l~~lk~aG~~~i~~~iEs~~-~~~~~~~~~~~~~~~~~~~~~a~~~Gi~~~~~~i~G~-~et  195 (312)
T d1r30a_         123 -----EACMTLGTLSESQAQRLANAGLDYYNHNLDTSP-EFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGL-GET  195 (312)
T ss_dssp             -----EEEEECSSCCHHHHHHHHHHCCCEEECCCBSCH-HHHHHHCCSSCHHHHHHHHHHHHHHHCEEECCEEECS-SCC
T ss_pred             -----EEEECCCCCHHHHHHHHHCCCCEEEECCCCHHH-HHHCCCCCCCCHHHHHHHHHHHHHHCCCEECCEEECC-CCC
T ss_conf             -----232011110399988865346006742112145-5533478999999999999999983466300257557-686


Q ss_pred             CCCCCCCHHHHHHC--CCCCEEEEEEEEECCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             32211127887531--800123464688259600014544980211035678899986557887
Q gi|254780628|r  184 MTQWEMELQRALSY--AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA  245 (395)
Q Consensus       184 ~e~~~~~l~~~~~l--~p~~is~Y~l~i~~~t~l~~~~~~~~~~~p~~~~~~~~~~~a~e~L~~  245 (395)
                      .+++.+.+..+.++  +++++.++++.+.|||++...      ..|+.++..++...++=+|..
T Consensus       196 ~~d~~~~l~~l~~l~~~~~~i~~~~~~p~~gT~l~~~------~~~~~~e~l~~iA~~Rl~lp~  253 (312)
T d1r30a_         196 VKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADN------DDVDAFDFIRTIAVARIMMPT  253 (312)
T ss_dssp             HHHHHHHHHHHHSSSSCCSEEEEEECCCCTTSTTSSC------CCCCHHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCC------CCCCHHHHHHHHHHHHHHCCC
T ss_conf             7999999999985577887643054168998432445------689889999999999986887


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Radical SAM enzymes
family: Biotin synthase
domain: Biotin synthase
species: Escherichia coli [TaxId: 562]