HHSEARCH alignment of GI: 254780628 and SCOP domain: d1tv8a_

Alignment
>d1tv8a_ c.1.28.3 (A:) Molybdenum cofactor biosynthesis protein A MoaA {Staphylococcus aureus [TaxId: 1280]}
Probab=98.17  E-value=1.1e-05  Score=54.83  Aligned_cols=171  Identities=15%  Similarity=0.128  Sum_probs=105.6

Q ss_pred             CCCCE-EEEEECCC-CCCCCCCCCCEEEEC--------CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC
Q ss_conf             98854-99994065-118376577302457--------886628899999999999998761895058999628888878
Q gi|254780628|r   15 GSNSL-GVYVHWPF-CVKKCPYCDFNSHVR--------RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI   84 (395)
Q Consensus        15 ~~~~l-~lYihiPF-C~~~C~yC~f~~~~~--------~~~~~~~~y~~~l~~Ei~~~~~~~~~~~~~~iy~GGGTPs~l   84 (395)
                      -+||+ .|.|+|-- |..+|.||.......        ......+ -+..+.+|+.   ++ +   +..+-|.||=|.+-
T Consensus         7 ~~r~~~~l~ieiT~~CNlrC~~C~~~~~~~~~~~~~~~~~~ls~e-~~~~li~~~~---~~-g---~~~v~~~GGEp~l~   78 (327)
T d1tv8a_           7 LGRPIRDLRLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFD-EMARIAKVYA---EL-G---VKKIRITGGEPLMR   78 (327)
T ss_dssp             TSCBCCEEEEECCSCCSCCCTTTSCTTTSSTTCCCCCGGGSCCHH-HHHHHHHHHH---HT-T---CCEEEEESSCGGGS
T ss_pred             CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH-HHHHHHHHHH---HC-C---CEEEEECCCCCCCC
T ss_conf             999208579972210089694789760167777647721459999-9999999998---75-9---83897379861246


Q ss_pred             CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHH-HHCCCCCHHHHHHHHH
Q ss_conf             999999999766404764443321133210410023477663034541143234332013455-4224431347899998
Q gi|254780628|r   85 EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF-LGRNHNASEAIAAIHL  163 (395)
Q Consensus        85 ~~~~l~~ll~~i~~~~~~~~~~e~t~E~~P~~~~~~~l~~l~~~Gv~RiS~GvQs~~~~~l~~-~~R~~~~~~~~~~~~~  163 (395)
                       ++-+..+....+.....     ..+=++=..++++.+..|++.|+++|++-+.+.+++.-.. .|+....+.+.++++.
T Consensus        79 -~~~~e~i~~~~~~~~~~-----~~~~Tng~ll~~~~~~~l~~~g~~~i~iSldg~~~e~~~~~rg~~g~~~~~~~~~~~  152 (327)
T d1tv8a_          79 -RDLDVLIAKLNQIDGIE-----DIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDY  152 (327)
T ss_dssp             -TTHHHHHHHHTTCTTCC-----EEEEEECSTTHHHHHHHHHHHTCCEEEEECCCSSHHHHHHHHSSCCCHHHHHHHHHH
T ss_pred             -CCHHHHHHHHHHHCCCC-----CCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHEEECCCCCHHHHHHHH
T ss_conf             -64799999875421222-----013444311120679999983998786202568787764510203542112368999


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
Q ss_conf             6302444333210002585432211127887531800
Q gi|254780628|r  164 ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD  200 (395)
Q Consensus       164 ~~~~~~~v~iDli~GlPgqt~e~~~~~l~~~~~l~p~  200 (395)
                      +++++..+.+..+. .++...+.+..-++.+...+.+
T Consensus       153 ~~~~g~~~~~~~~v-~~~~n~~~~~~~~~~~~~~~~~  188 (327)
T d1tv8a_         153 ATSIGLNVKVNVVI-QKGINDDQIIPMLEYFKDKHIE  188 (327)
T ss_dssp             HHHTTCEEEEEEEE-CTTTTGGGHHHHHHHHHHTTCC
T ss_pred             HHHCCCCCCEEEEE-ECCCCCCCCHHHHHHHHHHCCC
T ss_conf             99859986325898-5683531008999999740654


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Radical SAM enzymes
family: MoCo biosynthesis proteins
domain: Molybdenum cofactor biosynthesis protein A MoaA
species: Staphylococcus aureus [TaxId: 1280]