Query         gi|254780628|ref|YP_003065041.1| coproporphyrinogen III oxidase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 395
No_of_seqs    155 out of 3234
Neff          7.7 
Searched_HMMs 13730
Date          Wed Jun  1 08:43:57 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780628.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1olta_ c.1.28.2 (A:) Oxygen-i 100.0       0       0  667.9  30.3  382    6-393    37-437 (441)
  2 d1r30a_ c.1.28.1 (A:) Biotin s  99.7 6.3E-17 4.6E-21  129.2  11.6  200   27-245    49-253 (312)
  3 d1tv8a_ c.1.28.3 (A:) Molybden  98.2 1.1E-05 7.9E-10   54.8  10.3  171   15-200     7-188 (327)
  4 d1r7ja_ a.4.5.49 (A:) Sso10a (  94.2    0.13 9.4E-06   27.8   7.7   51  338-389    16-68  (90)
  5 d2v7fa1 a.4.5.84 (A:2-150) Rib  93.8     0.2 1.4E-05   26.6   8.1   39  356-394    98-136 (149)
  6 d3ctaa1 a.4.5.28 (A:5-89) Ta10  91.8    0.39 2.9E-05   24.6   7.6   54  340-393    21-79  (85)
  7 d1qwga_ c.1.27.1 (A:) (2r)-pho  91.2    0.28   2E-05   25.6   6.0  121   68-202    36-165 (251)
  8 d2a61a1 a.4.5.28 (A:5-143) Tra  90.1    0.56 4.1E-05   23.6   8.6   69  321-392    28-104 (139)
  9 d1s3ja_ a.4.5.28 (A:) Putative  89.9    0.58 4.2E-05   23.5   7.5   69  321-392    33-109 (143)
 10 d2etha1 a.4.5.28 (A:1-140) Put  89.8    0.59 4.3E-05   23.5   9.4   70  320-392    29-106 (140)
 11 d2fxaa1 a.4.5.28 (A:6-167) Pro  89.7     0.6 4.4E-05   23.4   7.6   70  320-392    38-115 (162)
 12 d1jgsa_ a.4.5.28 (A:) Multiple  89.6    0.61 4.5E-05   23.3   9.4   69  321-392    32-108 (138)
 13 d1lj9a_ a.4.5.28 (A:) Transcri  89.0    0.68 4.9E-05   23.0   9.0   69  321-392    27-103 (144)
 14 d1mkma1 a.4.5.33 (A:1-75) Tran  88.3    0.75 5.4E-05   22.8   8.6   58  336-393    16-75  (75)
 15 d2p8ta1 a.4.5.72 (A:14-82) Hyp  87.9     0.8 5.8E-05   22.6   8.4   62  329-391     5-69  (69)
 16 d2frha1 a.4.5.28 (A:102-216) P  87.3    0.86 6.2E-05   22.4   6.5   71  320-393    30-110 (115)
 17 d1h4pa_ c.1.8.3 (A:) Exo-beta-  87.2    0.24 1.8E-05   26.0   3.3   65  116-181    73-139 (408)
 18 d1lnwa_ a.4.5.28 (A:) MexR rep  86.6    0.94 6.8E-05   22.1  10.6   70  320-392    33-110 (141)
 19 d2bv6a1 a.4.5.28 (A:5-140) Tra  85.8       1 7.4E-05   21.9   8.7   67  321-390    32-106 (136)
 20 d1ub9a_ a.4.5.28 (A:) Hypothet  85.8       1 7.5E-05   21.8   7.3   64  329-392    19-90  (100)
 21 d1ur4a_ c.1.8.3 (A:) Beta-1,4-  85.2     1.1   8E-05   21.7   7.1   61  117-177    39-101 (387)
 22 d2ptza1 c.1.11.1 (A:139-429) E  85.1     1.1 8.1E-05   21.6   5.9   33   77-110    71-104 (291)
 23 d2hr3a1 a.4.5.28 (A:2-146) Pro  84.7     1.2 8.4E-05   21.5   9.1   63  330-392    38-109 (145)
 24 d1hsja1 a.4.5.28 (A:373-487) S  84.7     1.1 7.9E-05   21.7   5.6   72  319-393    28-109 (115)
 25 d1qpoa1 c.1.17.1 (A:117-285) Q  84.6    0.47 3.4E-05   24.1   3.8   14  191-204   140-153 (169)
 26 d2fbia1 a.4.5.28 (A:5-140) Pro  84.4     1.2 8.6E-05   21.5   9.1   70  320-392    27-104 (136)
 27 d1o4ua1 c.1.17.1 (A:104-273) Q  84.2     0.4 2.9E-05   24.5   3.2   88   90-204    65-152 (170)
 28 d3deua1 a.4.5.28 (A:2-141) Tra  83.8     1.3 9.1E-05   21.3   8.2   69  321-392    29-106 (140)
 29 d1e0ta2 c.1.12.1 (A:1-69,A:168  83.3    0.73 5.3E-05   22.9   4.2   78  113-204    11-93  (246)
 30 d1u83a_ c.1.27.1 (A:) (2r)-pho  83.2     1.3 9.7E-05   21.1   6.7  119   68-202    39-165 (249)
 31 d1qapa1 c.1.17.1 (A:130-296) Q  82.7    0.51 3.7E-05   23.9   3.3   25  111-135    24-49  (167)
 32 d1x7fa2 c.1.8.12 (A:1-244) Out  82.1    0.95 6.9E-05   22.1   4.5  143   59-249    23-175 (244)
 33 d1h1na_ c.1.8.3 (A:) Endocellu  80.9     1.5 0.00011   20.7   5.2  119  116-248    31-158 (305)
 34 d3broa1 a.4.5.28 (A:3-137) Tra  80.1     1.7 0.00012   20.4   9.9   71  320-393    26-106 (135)
 35 d1nvma2 c.1.10.5 (A:2-290) 4-h  80.0     1.7 0.00012   20.4   7.1   74  113-204    89-167 (289)
 36 d2al1a1 c.1.11.1 (A:142-436) E  80.0       1 7.4E-05   21.9   4.0   39  149-189   129-167 (295)
 37 d1p4xa2 a.4.5.28 (A:126-250) S  79.6     1.8 0.00013   20.3   8.3   72  319-393    29-110 (125)
 38 d1foba_ c.1.8.3 (A:) Beta-1,4-  79.1    0.83   6E-05   22.5   3.3   55  117-177    28-82  (334)
 39 d1vjza_ c.1.8.3 (A:) Endogluca  78.3    0.91 6.6E-05   22.2   3.4  127  115-250    19-167 (325)
 40 d1aq0a_ c.1.8.3 (A:) Plant bet  77.8    0.67 4.9E-05   23.1   2.6   44   83-138    12-55  (306)
 41 d1pkla2 c.1.12.1 (A:1-87,A:187  77.8     1.4  0.0001   21.0   4.2   78  113-204    28-111 (258)
 42 d1gjwa2 c.1.8.1 (A:1-572) Malt  76.7    0.86 6.3E-05   22.4   2.9   63  119-181   123-208 (572)
 43 d2fbha1 a.4.5.28 (A:8-144) Tra  76.4     2.2 0.00016   19.7   9.2   61  332-392    34-103 (137)
 44 d1z91a1 a.4.5.28 (A:8-144) Org  76.3     1.2 8.6E-05   21.5   3.5   67  320-389    30-104 (137)
 45 d1m7xa3 c.1.8.1 (A:227-622) 1,  75.8    0.83 6.1E-05   22.5   2.6   13   14-26     12-25  (396)
 46 d1p4xa1 a.4.5.28 (A:1-125) Sta  75.8     2.3 0.00016   19.6   8.3   72  319-393    30-111 (125)
 47 d1tw3a1 a.4.5.29 (A:14-98) Car  75.2     2.3 0.00017   19.5   4.9   50  338-387    32-83  (85)
 48 d1tvna1 c.1.8.3 (A:1-293) Endo  75.1     2.3 0.00017   19.5   6.1  124  114-251    36-164 (293)
 49 d1i60a_ c.1.15.4 (A:) Hypothet  74.5     2.4 0.00018   19.4   5.3   11  123-133    91-101 (278)
 50 d1egza_ c.1.8.3 (A:) Endogluca  73.7     2.5 0.00019   19.3   6.5  123  113-251    35-162 (291)
 51 d1lwha2 c.1.8.1 (A:1-391) 4-al  73.5    0.91 6.6E-05   22.2   2.3   18   82-99     65-82  (391)
 52 d2fyma1 c.1.11.1 (A:140-431) E  73.4     2.6 0.00019   19.2   5.7   37  150-188   126-162 (292)
 53 d1w6ta1 c.1.11.1 (A:138-433) E  72.6     2.5 0.00018   19.3   4.4   22   77-98     69-91  (296)
 54 d1twda_ c.1.30.1 (A:) Copper h  72.4     2.7  0.0002   19.1   5.8  111   65-202    18-144 (247)
 55 d2fbka1 a.4.5.28 (A:8-179) Tra  72.2     2.7  0.0002   19.0   6.8   69  321-392    60-139 (172)
 56 d2f2ea1 a.4.5.69 (A:5-146) Hyp  71.6     2.8 0.00021   18.9   7.9   50  341-390    34-90  (142)
 57 d2pb1a1 c.1.8.3 (A:7-400) Exo-  70.9     2.1 0.00015   19.8   3.6  119  116-247    68-212 (394)
 58 d1ghsa_ c.1.8.3 (A:) Plant bet  70.3     1.2 8.7E-05   21.4   2.3   14  235-248   209-222 (306)
 59 d1ht6a2 c.1.8.1 (A:1-347) Plan  70.1       3 0.00022   18.8   4.3   21  336-356   314-334 (347)
 60 d1ud2a2 c.1.8.1 (A:1-390) Bact  70.0     1.5 0.00011   20.7   2.8   29  153-181    79-107 (390)
 61 d2bhua3 c.1.8.1 (A:111-530) Gl  69.4     1.3 9.1E-05   21.3   2.3   47  156-202   145-194 (420)
 62 d1hjsa_ c.1.8.3 (A:) Beta-1,4-  69.0     2.2 0.00016   19.7   3.5   55  117-177    28-82  (332)
 63 d1dpua_ a.4.5.16 (A:) C-termin  68.9     3.2 0.00024   18.6   6.1   61  321-381     4-68  (69)
 64 d1ceoa_ c.1.8.3 (A:) Endogluca  68.3     1.5 0.00011   20.7   2.5  116  117-247    29-164 (340)
 65 d2hzta1 a.4.5.69 (A:4-98) Puta  67.8     3.4 0.00025   18.4   6.6   51  340-390    24-83  (95)
 66 d1hvxa2 c.1.8.1 (A:1-393) Bact  67.4     2.2 0.00016   19.7   3.2   29  153-181    80-108 (393)
 67 d2g50a2 c.1.12.1 (A:12-115,A:2  66.2     3.4 0.00025   18.4   4.0   78  113-204    40-128 (282)
 68 d1gcya2 c.1.8.1 (A:1-357) G4-a  66.2     2.2 0.00016   19.6   3.0   15   85-99     91-105 (357)
 69 d1z7ua1 a.4.5.69 (A:1-108) Hyp  66.0     3.7 0.00027   18.2   7.4   51  340-390    32-91  (108)
 70 d2akza1 c.1.11.1 (A:140-433) E  65.6     3.8 0.00027   18.1   6.8   37  150-188   129-165 (294)
 71 d2d3na2 c.1.8.1 (A:5-398) Bact  65.0     2.4 0.00018   19.4   3.0   15   85-99     77-91  (394)
 72 d1rd5a_ c.1.2.4 (A:) Trp synth  64.6     3.9 0.00028   18.0   4.3   86  112-202    26-121 (261)
 73 d2aaaa2 c.1.8.1 (A:1-381) Fung  64.0     2.2 0.00016   19.6   2.7   26  153-178    96-121 (381)
 74 d1wzla3 c.1.8.1 (A:121-502) Ma  63.4     1.9 0.00014   20.1   2.2   29  153-181    98-126 (382)
 75 d1j0ha3 c.1.8.1 (A:124-505) Ne  63.0     1.9 0.00014   20.0   2.2   15   85-99     98-112 (382)
 76 d1stza1 a.4.5.51 (A:14-100) He  62.7     4.2 0.00031   17.8   7.6   70  321-391     2-80  (87)
 77 d1a3xa2 c.1.12.1 (A:1-87,A:189  62.4     4.3 0.00031   17.8   4.2   78  113-204    28-111 (265)
 78 d1hx0a2 c.1.8.1 (A:1-403) Anim  62.1     2.5 0.00018   19.3   2.7   65  117-181    24-103 (403)
 79 d1k75a_ c.82.1.2 (A:) L-histid  61.7     3.3 0.00024   18.5   3.2  116   74-204   126-266 (431)
 80 d1yyva1 a.4.5.69 (A:9-122) Put  61.4     4.4 0.00032   17.6   6.7   50  341-390    38-96  (114)
 81 d1ua7a2 c.1.8.1 (A:4-347) Bact  60.7     3.1 0.00022   18.7   2.9   23  173-195   172-194 (344)
 82 d1uoka2 c.1.8.1 (A:1-479) Olig  59.7     2.6 0.00019   19.1   2.4   65  120-184    35-108 (479)
 83 d1qtwa_ c.1.15.1 (A:) Endonucl  59.6     4.8 0.00035   17.4   3.8   63   73-136    30-109 (285)
 84 d3bmva4 c.1.8.1 (A:1-406) Cycl  59.1     2.8  0.0002   19.0   2.4   28  153-180   115-142 (406)
 85 d1mxga2 c.1.8.1 (A:1-361) Bact  57.6       4 0.00029   18.0   3.0   25  154-178    86-110 (361)
 86 d2guya2 c.1.8.1 (A:1-381) Fung  57.4     3.1 0.00022   18.7   2.4   15   85-99     96-110 (381)
 87 d1qhoa4 c.1.8.1 (A:1-407) Cycl  57.2     2.8  0.0002   19.0   2.2   15   85-99    106-120 (407)
 88 d1eh9a3 c.1.8.1 (A:91-490) Gly  57.1     4.2  0.0003   17.8   3.1   33  163-195   150-183 (400)
 89 d1ea9c3 c.1.8.1 (C:122-503) Ma  56.3     4.1  0.0003   17.8   2.9   15   85-99     96-110 (382)
 90 d1g5aa2 c.1.8.1 (A:1-554) Amyl  56.2     3.8 0.00027   18.1   2.7   62  119-180   116-188 (554)
 91 d2fswa1 a.4.5.69 (A:3-104) Hyp  56.1     5.5  0.0004   17.1   6.3   49  341-389    34-91  (102)
 92 d1bf2a3 c.1.8.1 (A:163-637) Is  55.9     3.2 0.00023   18.6   2.3   14   86-99    110-123 (475)
 93 d1edga_ c.1.8.3 (A:) Endogluca  55.5     5.3 0.00038   17.2   3.4  129  117-249    62-213 (380)
 94 d1g94a2 c.1.8.1 (A:1-354) Bact  54.7     3.6 0.00026   18.2   2.4   29  153-181    63-91  (354)
 95 d1m53a2 c.1.8.1 (A:43-520) Iso  54.3       4 0.00029   18.0   2.6   15   85-99     77-91  (478)
 96 d1m1ha2 d.58.42.1 (A:5-50,A:13  53.6     2.4 0.00017   19.5   1.3   20   78-97     81-100 (101)
 97 d1qzza1 a.4.5.29 (A:10-101) Ac  53.4     5.5  0.0004   17.0   3.2   49  339-387    39-91  (92)
 98 d1rqba2 c.1.10.5 (A:4-306) Tra  53.0     6.1 0.00044   16.7   6.3   79  114-204   101-180 (303)
 99 d1x5wa2 g.37.1.1 (A:36-64) Zin  52.8     2.1 0.00015   19.8   0.9   10   31-40      4-13  (29)
100 d1y0ua_ a.4.5.5 (A:) Putative   52.7     4.9 0.00036   17.4   2.8   47  338-384    41-88  (89)
101 d1h3ga3 c.1.8.1 (A:96-517) Cyc  52.7     3.8 0.00028   18.1   2.3   15   85-99    102-116 (422)
102 d1xd3a_ d.3.1.6 (A:) Ubiquitin  50.0     3.6 0.00026   18.3   1.8  104  108-222     6-125 (229)
103 d1xmaa_ a.4.5.61 (A:) Predicte  49.9     6.8  0.0005   16.4   5.1   38  356-393    46-91  (103)
104 d1e43a2 c.1.8.1 (A:1-393) Bact  49.0     6.2 0.00045   16.7   2.9   14   86-99     78-91  (393)
105 d1xkya1 c.1.10.1 (A:1-292) Dih  47.8     7.3 0.00053   16.2   9.8  125   52-194    23-153 (292)
106 d1ibja_ c.67.1.3 (A:) Cystathi  47.2     7.4 0.00054   16.2   3.0   31  154-184   149-180 (380)
107 d1e5ea_ c.67.1.3 (A:) Methioni  46.8     7.6 0.00055   16.1   4.1   30  155-184   161-192 (394)
108 d2choa2 c.1.8.10 (A:127-436) G  45.9     6.1 0.00044   16.8   2.4   22  119-140    97-118 (310)
109 d1xxxa1 c.1.10.1 (A:5-300) Dih  44.3     8.3  0.0006   15.9   9.4  133   52-202    27-163 (296)
110 d1jaea2 c.1.8.1 (A:1-378) Anim  43.7     6.4 0.00047   16.6   2.3   28  153-180    73-100 (378)
111 d2cyga1 c.1.8.3 (A:29-340) Pla  42.6     2.9 0.00021   18.9   0.4   17  120-137    38-54  (312)
112 d1twia2 c.1.6.1 (A:50-313) Dia  42.3     8.9 0.00065   15.7   5.7   14  200-213   165-178 (264)
113 d2d1ha1 a.4.5.50 (A:1-109) Hyp  41.9       9 0.00065   15.6   6.6   71  320-393    18-97  (109)
114 d1lvaa4 a.4.5.35 (A:575-634) C  40.7     9.4 0.00068   15.5   6.3   48  331-378     9-58  (60)
115 d2esha1 a.4.5.61 (A:4-117) Hyp  40.0     9.6  0.0007   15.4   5.3   39  355-393    49-94  (114)
116 d1wzaa2 c.1.8.1 (A:28-436) Bac  40.0     8.4 0.00061   15.8   2.4   15   85-99     80-94  (409)
117 d2c5sa2 d.308.1.1 (A:3-173) Th  39.8     9.7  0.0007   15.4   5.7  118   46-175    16-141 (171)
118 d1ur3m_ c.1.7.1 (M:) Hypotheti  39.4     9.8 0.00071   15.4   4.5   61  180-257    99-161 (298)
119 d1rh9a1 c.1.8.3 (A:30-399) Bet  38.8      10 0.00073   15.3   2.9   58  119-176    42-103 (370)
120 d1yx1a1 c.1.15.7 (A:3-252) Hyp  38.7      10 0.00073   15.3   5.3   20  184-203    79-98  (250)
121 d1m5wa_ c.1.24.1 (A:) Pyridoxi  38.7      10 0.00073   15.3   4.1   59  190-260    78-136 (242)
122 d2cbia2 c.1.8.10 (A:179-495) H  36.9      11 0.00078   15.1   4.8   22  119-140   100-121 (317)
123 d2fi0a1 a.248.1.1 (A:3-81) Hyp  36.2      11  0.0008   15.0   3.1   34  119-158    21-54  (79)
124 d1s2wa_ c.1.12.7 (A:) Phosphoe  35.6      11 0.00082   15.0   4.0   67   83-151    58-126 (275)
125 d1m0sa1 c.124.1.4 (A:1-126,A:1  34.9     6.2 0.00045   16.7   1.1   30   64-99     16-45  (147)
126 d1cl1a_ c.67.1.3 (A:) Cystathi  34.0       6 0.00044   16.8   0.9   25  156-180   161-187 (391)
127 d1tz9a_ c.1.15.6 (A:) Mannonat  33.9      12 0.00087   14.8   2.5   17   48-64     80-96  (353)
128 d1ecea_ c.1.8.3 (A:) Endocellu  33.7      12 0.00087   14.8   4.9  129  115-249    43-195 (358)
129 d1yqea1 c.56.7.1 (A:1-278) Hyp  32.3      13 0.00092   14.6   3.1   29   84-112   108-136 (278)
130 d1lbqa_ c.92.1.1 (A:) Ferroche  32.0      11 0.00079   15.1   1.9  117   76-198    63-185 (356)
131 d1li4a2 c.23.12.3 (A:3-189,A:3  31.9      13 0.00094   14.6   4.1   22  177-198    98-119 (267)
132 d1n8pa_ c.67.1.3 (A:) Cystathi  31.1      11 0.00079   15.1   1.8   11  155-165   155-165 (393)
133 d1t0ia_ c.23.5.4 (A:) Hypothet  30.1      14   0.001   14.4   2.7   65   24-100    49-114 (185)
134 d1mw9x_ e.10.1.1 (X:) DNA topo  29.7      14   0.001   14.3   5.6   35  356-391   497-531 (591)
135 d1sr9a2 c.1.10.5 (A:61-370) 2-  29.6      14   0.001   14.3  10.1   19   80-99     54-72  (310)
136 d1o5ka_ c.1.10.1 (A:) Dihydrod  29.1      14   0.001   14.3   7.0  130   53-200    22-157 (295)
137 d7a3ha_ c.1.8.3 (A:) Endogluca  28.3      15  0.0011   14.2   6.8  120  114-250    38-166 (300)
138 d2dkya1 a.60.1.3 (A:8-85) Dele  27.7     9.6  0.0007   15.4   1.1   15  237-251    17-31  (78)
139 d1c52a_ a.3.1.1 (A:) Cytochrom  27.3      15  0.0011   14.1   3.3   40   83-127    74-113 (131)
140 d1bqca_ c.1.8.3 (A:) Beta-mann  26.9      16  0.0011   14.0   6.0  113  119-250    35-158 (302)
141 d1f74a_ c.1.10.1 (A:) N-acetyl  26.6      16  0.0011   14.0   9.1  129   52-196    23-156 (293)
142 d1zyba1 a.4.5.4 (A:148-220) Pr  26.5      16  0.0012   14.0   6.6   60  322-382     4-70  (73)
143 d1tqja_ c.1.2.2 (A:) D-ribulos  26.3      16  0.0012   14.0   3.2  178   54-281    16-201 (221)
144 d2coba1 a.4.1.15 (A:8-70) Liga  26.2     6.7 0.00049   16.5   0.0   36  150-185     5-41  (63)
145 d1ixsb1 a.4.5.11 (B:243-318) H  26.0      16  0.0012   13.9   5.6   45  341-386    23-70  (76)
146 d1vkia_ d.116.1.1 (A:) Hypothe  26.0      16  0.0012   13.9   2.4   40  245-284    94-137 (165)
147 d2czca2 c.2.1.3 (A:1-139,A:302  25.4      16  0.0011   14.0   1.8   38  105-142    79-116 (172)
148 d1pffa_ c.67.1.3 (A:) Methioni  25.2      17  0.0012   13.8   3.9   20  156-175   101-121 (331)
149 d2h80a1 a.60.1.3 (A:11-81) Del  25.1     9.7 0.00071   15.4   0.7   15  237-251    12-26  (71)
150 d1ev0a_ d.71.1.1 (A:) Cell div  25.1      17  0.0012   13.8   2.4   34   77-111     2-36  (58)
151 d1cmwa2 c.120.1.2 (A:10-173) 5  25.1      17  0.0012   13.8   2.8   74  178-253    29-104 (164)
152 d1lxja_ d.58.48.1 (A:) Hypothe  24.9      17  0.0012   13.8   5.9   64   71-137    10-79  (104)
153 d1s4na_ c.68.1.16 (A:) Glycoli  24.7      14   0.001   14.4   1.4   87   52-150    31-122 (339)
154 d2etla1 d.3.1.6 (A:1-223) Ubiq  24.7      17  0.0012   13.8   6.1  115  109-237     5-134 (223)
155 d1i42a_ d.15.1.2 (A:) p47 {Rat  23.9      18  0.0013   13.7   2.5   64  130-194    14-77  (89)
156 d1in4a1 a.4.5.11 (A:255-329) H  23.8      18  0.0013   13.7   7.4   45  341-386    23-70  (75)
157 d1gc0a_ c.67.1.3 (A:) Methioni  23.8      18  0.0013   13.7   2.5   28  153-180   159-186 (392)
158 d1qgna_ c.67.1.3 (A:) Cystathi  23.6      18  0.0013   13.6   2.5   27  154-180   169-195 (398)
159 d1wcga1 c.1.8.4 (A:3-464) Thio  23.0      18  0.0013   13.6   4.5   24  363-387   428-455 (462)
160 d1fp2a1 a.4.5.29 (A:8-108) Iso  22.8      19  0.0013   13.5   3.6   48  340-387    44-98  (101)
161 d1hkva2 c.1.6.1 (A:46-310) Dia  22.7      19  0.0014   13.5   3.1   13  200-212   158-170 (265)
162 d1yg2a_ a.4.5.61 (A:) Hypothet  22.5      19  0.0014   13.5   7.4   12  239-250    42-53  (178)
163 d3c7bb2 d.58.36.2 (B:4-122) Di  22.3      19  0.0014   13.5   4.2   30   68-99     45-74  (119)
164 d2c1ha1 c.1.10.3 (A:10-328) 5-  22.1      17  0.0012   13.8   1.4   38  180-217   160-198 (319)
165 d1ydhb_ c.129.1.1 (B:) Hypothe  22.0      16  0.0011   14.0   1.3   53   30-98      4-56  (181)
166 d2qwva1 c.116.1.7 (A:5-205) Un  21.7      19  0.0014   13.4   5.6   25  117-141   158-182 (201)
167 d2axla1 a.4.5.43 (A:1-144) Wer  21.7      19  0.0014   13.4   4.9   17  233-249    64-80  (144)
168 d3cu0a1 c.68.1.7 (A:75-335) 1,  21.6      20  0.0014   13.4   4.0  137   73-212     2-149 (261)
169 d1cmxa_ d.3.1.6 (A:) Ubiquitin  21.6      18  0.0013   13.7   1.5   96  108-219     4-111 (229)
170 d2dmda1 g.37.1.1 (A:34-61) Zin  21.2      11 0.00082   15.0   0.4   10   29-38      3-12  (28)
171 d1w5fa1 c.32.1.1 (A:22-215) Ce  21.2      20  0.0015   13.3   4.3   97   56-162    72-176 (194)
172 d1rpxa_ c.1.2.2 (A:) D-ribulos  20.7      20  0.0015   13.3   3.5  181   54-282    24-210 (230)
173 d1g01a_ c.1.8.3 (A:) Alkaline   20.6      20  0.0015   13.2   4.0  132  113-250    48-190 (357)
174 d1lv3a_ g.39.1.9 (A:) Hypothet  20.6     7.2 0.00052   16.3  -0.7   14   24-37     24-37  (65)
175 d1yq2a5 c.1.8.3 (A:313-609) be  20.5      21  0.0015   13.2   1.9   19  187-205   137-155 (297)
176 d1vqou1 g.39.1.6 (U:4-56) Ribo  20.4      15  0.0011   14.1   0.9   17   30-46      1-17  (53)

No 1  
>d1olta_ c.1.28.2 (A:) Oxygen-independent coproporphyrinogen III oxidase HemN {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=0  Score=667.93  Aligned_cols=382  Identities=23%  Similarity=0.375  Sum_probs=351.2

Q ss_pred             HHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCC
Q ss_conf             89988428898854999940651183765773024578866288999999999999987618950589996288888789
Q gi|254780628|r    6 AYENNMTGQGSNSLGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIE   85 (395)
Q Consensus         6 ~~~~~~~~~~~~~l~lYihiPFC~~~C~yC~f~~~~~~~~~~~~~y~~~l~~Ei~~~~~~~~~~~~~~iy~GGGTPs~l~   85 (395)
                      ++.+.+...+.+|||||||||||+++|+||+|++.+.+.....++|+++|++||+..++..++.++.+|||||||||+|+
T Consensus        37 ~~~~~l~~~~~~plsLYiHiPFC~~~C~yC~~~~~~~~~~~~~~~Y~~~L~~Ei~~~~~~~~~~~v~~i~~GGGTPt~L~  116 (441)
T d1olta_          37 AFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGGGTPTYLN  116 (441)
T ss_dssp             HHHHHHTTCTTSCEEEEEEECEESSCCTTCCSSCEECSCTHHHHHHHHHHHHHHHHHGGGGTTCCEEEEEEEESCGGGSC
T ss_pred             HHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCC
T ss_conf             99999961899962899972897888998958365488855099999999999999667617985030386188847789


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf             99999999766404764443321133210410023477663034541143234332013455422443134789999863
Q gi|254780628|r   86 PQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLAR  165 (395)
Q Consensus        86 ~~~l~~ll~~i~~~~~~~~~~e~t~E~~P~~~~~~~l~~l~~~Gv~RiS~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~  165 (395)
                      +++|.+|++.++++|++.+++|+|+|++|++++.++|+.|++.||||||||||||||++|+++||.|+.+++.++++.+|
T Consensus       117 ~~~l~~ll~~l~~~~~~~~~~e~t~E~~P~~~~~~~l~~l~~~G~nRiSlGvQs~~~~vl~~i~R~~~~~~~~~~~~~~r  196 (441)
T d1olta_         117 KAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAR  196 (441)
T ss_dssp             HHHHHHHHHHHHHHSCEEEEEEEEEEECSSSCCTHHHHHHHHTTCCEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCHHCCHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf             99999999987652234500002210234542057899999719855995120013045544305787899999999877


Q ss_pred             CC-CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             02-44433321000258543221112788753180012346468825960001454498021103567889998655788
Q gi|254780628|r  166 NI-FPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITS  244 (395)
Q Consensus       166 ~~-~~~v~iDli~GlPgqt~e~~~~~l~~~~~l~p~~is~Y~l~i~~~t~l~~~~~~~~~~~p~~~~~~~~~~~a~e~L~  244 (395)
                      ++ |.+||+|||||+||||.++|.+||+.+++++||||++|+|.++|++. .++...++..+|++++..+||+.+.+.|.
T Consensus       197 ~~g~~~vn~DLI~GlPgqT~~~~~~tl~~~~~l~pd~is~y~~~~~p~~~-~~q~~~~~~~lp~~~~~~~~~~~~~~~L~  275 (441)
T d1olta_         197 EIGFTSTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNYAHLPTIF-AAQRKIKDADLPSPQQKLDILQETIAFLT  275 (441)
T ss_dssp             HTTCCSCEEEEEESCTTCCHHHHHHHHHHHHHHCCSEEEEEECCCCTTTS-GGGGGSCGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             HCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCHH-HHHHHCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             41442362354432377603778899989985088742232211246126-76630223200245788899999999998


Q ss_pred             HCCCCCCCCCCHHHHHHH------------HCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCC
Q ss_conf             709624236743431011------------01332112444123204320011578861578654247025778775389
Q gi|254780628|r  245 AHGLHAYEISNHSFLGAE------------SLHNLNYWRYGDYIGIGPGAHSRVKVGSHRVAISIEKHPESWLKMVRKNG  312 (395)
Q Consensus       245 ~~GY~~Yeis~fak~~~~------------s~hn~~Yw~~~d~iG~G~GA~S~l~~~~~~~~~~~~~~~~~Y~~~i~~~~  312 (395)
                      ++||.+|++++|+||+..            +.||..+|...++||||+||+|++++    ..++|.+++++|.+++++++
T Consensus       276 ~~GY~~~~~~~far~~~~~~~a~~~g~~~r~~~gy~~~~~~~~iGlG~sA~S~~~~----~~~~N~~~l~~Y~~~i~~g~  351 (441)
T d1olta_         276 QSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGD----CYAQNQKELKQYYQQVDEQG  351 (441)
T ss_dssp             HTTCEEEETTEEECTTSHHHHHHHHTCCEECSSCEESCCSCEEEEESTTCEEEETT----EEEEECSSHHHHHHHHHHHS
T ss_pred             HCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEEEC----CEEEEEHHHHHHHHHHHHCC
T ss_conf             73831014887641140366665554521554353437985252003674465302----00333000211113454068


Q ss_pred             CCCCCEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHH------HHHHHHHCCCEEEEECCEEEECHHHHHHH
Q ss_conf             633322454999989999999656237998889998838996499------99999987994985598999956758989
Q gi|254780628|r  313 HAVVEKEFLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLDIE------CERNLQRQGFIERVQFSRLRCTQRGMTML  386 (395)
Q Consensus       313 ~p~~~~~~Ls~~e~~~e~l~~~LR~~~Gid~~~~~~~fg~~~~~~------~~~~L~~~Gli~~~~~~~l~lT~~G~~~~  386 (395)
                      +|+.++..+|++|++++++|++||+..|||.+.++++||.++...      .+++|+++||++ .+++++++|++|++|+
T Consensus       352 lp~~~g~~Ls~~d~~~~~vi~~L~~~~~ld~~~~~~~fg~~~~~~f~~~~~~L~~l~~~GLv~-~~~~~l~lT~~Gr~l~  430 (441)
T d1olta_         352 NALWRGIALTRDDCIRRDVIKSLICNFRLDYSPIEQQWDLLFADYFAEDLKLLAPLAKDGLVD-VDEKGIQVTAKGRLLI  430 (441)
T ss_dssp             CCEEEEEECCHHHHHHHHHHHHHHHHSEEEHHHHHHHTTCCHHHHTHHHHHHHHHHHHTTSEE-ECSSEEEECTTTGGGH
T ss_pred             CCCEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEE-EECCEEEECHHHHHHH
T ss_conf             850010148888999999999899868928799999979888898799999999999789899-9899999998389999


Q ss_pred             HHHHHHH
Q ss_conf             9999986
Q gi|254780628|r  387 DSVIANL  393 (395)
Q Consensus       387 d~I~~~l  393 (395)
                      |+|+..|
T Consensus       431 ~~I~~~F  437 (441)
T d1olta_         431 RNICMCF  437 (441)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHHH
T ss_conf             9999987


No 2  
>d1r30a_ c.1.28.1 (A:) Biotin synthase {Escherichia coli [TaxId: 562]}
Probab=99.71  E-value=6.3e-17  Score=129.24  Aligned_cols=200  Identities=11%  Similarity=0.085  Sum_probs=141.1

Q ss_pred             CCCCCCCCCCCEEEECCCCC-CHHHHHHHHHHHHHHHHHHHCCCEEEEEEE-CCCCC-CCCCHHHHHHHHHHHHHCCCCC
Q ss_conf             51183765773024578866-288999999999999987618950589996-28888-8789999999997664047644
Q gi|254780628|r   27 FCVKKCPYCDFNSHVRRYKV-GQENFIQSFLTEMQWMRQLTGPRSISSIFF-GGGTP-SLIEPQNIALILDGIAKNWTVS  103 (395)
Q Consensus        27 FC~~~C~yC~f~~~~~~~~~-~~~~y~~~l~~Ei~~~~~~~~~~~~~~iy~-GGGTP-s~l~~~~l~~ll~~i~~~~~~~  103 (395)
                      .|+..|.||+|......... ....-++.+.+|++..... +..   .+++ ||..| .-...+.+.++++.+++.+.  
T Consensus        49 gC~~~C~fC~~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~-G~~---~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~--  122 (312)
T d1r30a_          49 ACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAA-GST---RFCMGAAWKNPHERDMPYLEQMVQGVKAMGL--  122 (312)
T ss_dssp             CBSSCCSSCSCBTTSCTTCCCCCCCCHHHHHHHHHHHHHT-TCS---EEEEEECCSSCCTTTHHHHHHHHHHHHHTTS--
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCE---EEEECCCCCCCCHHHHHHHHHHHHHCCCCCC--
T ss_conf             9888698399876689887642124557899999999974-998---9997057778740668999999985211363--


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf             43321133210410023477663034541143234332013455422443134789999863024443332100025854
Q gi|254780628|r  104 SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT  183 (395)
Q Consensus       104 ~~~e~t~E~~P~~~~~~~l~~l~~~Gv~RiS~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli~GlPgqt  183 (395)
                           .+-.++..++++.++.|+++|++++.+|++|.+ +.+..+...++.++..++++.+++++..++..+|+|+ ++|
T Consensus       123 -----~~~~~~~~l~~e~l~~lk~aG~~~i~~~iEs~~-~~~~~~~~~~~~~~~~~~~~~a~~~Gi~~~~~~i~G~-~et  195 (312)
T d1r30a_         123 -----EACMTLGTLSESQAQRLANAGLDYYNHNLDTSP-EFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGL-GET  195 (312)
T ss_dssp             -----EEEEECSSCCHHHHHHHHHHCCCEEECCCBSCH-HHHHHHCCSSCHHHHHHHHHHHHHHHCEEECCEEECS-SCC
T ss_pred             -----EEEECCCCCHHHHHHHHHCCCCEEEECCCCHHH-HHHCCCCCCCCHHHHHHHHHHHHHHCCCEECCEEECC-CCC
T ss_conf             -----232011110399988865346006742112145-5533478999999999999999983466300257557-686


Q ss_pred             CCCCCCCHHHHHHC--CCCCEEEEEEEEECCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             32211127887531--800123464688259600014544980211035678899986557887
Q gi|254780628|r  184 MTQWEMELQRALSY--AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSA  245 (395)
Q Consensus       184 ~e~~~~~l~~~~~l--~p~~is~Y~l~i~~~t~l~~~~~~~~~~~p~~~~~~~~~~~a~e~L~~  245 (395)
                      .+++.+.+..+.++  +++++.++++.+.|||++...      ..|+.++..++...++=+|..
T Consensus       196 ~~d~~~~l~~l~~l~~~~~~i~~~~~~p~~gT~l~~~------~~~~~~e~l~~iA~~Rl~lp~  253 (312)
T d1r30a_         196 VKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADN------DDVDAFDFIRTIAVARIMMPT  253 (312)
T ss_dssp             HHHHHHHHHHHHSSSSCCSEEEEEECCCCTTSTTSSC------CCCCHHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCC------CCCCHHHHHHHHHHHHHHCCC
T ss_conf             7999999999985577887643054168998432445------689889999999999986887


No 3  
>d1tv8a_ c.1.28.3 (A:) Molybdenum cofactor biosynthesis protein A MoaA {Staphylococcus aureus [TaxId: 1280]}
Probab=98.17  E-value=1.1e-05  Score=54.83  Aligned_cols=171  Identities=15%  Similarity=0.128  Sum_probs=105.6

Q ss_pred             CCCCE-EEEEECCC-CCCCCCCCCCEEEEC--------CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC
Q ss_conf             98854-99994065-118376577302457--------886628899999999999998761895058999628888878
Q gi|254780628|r   15 GSNSL-GVYVHWPF-CVKKCPYCDFNSHVR--------RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLI   84 (395)
Q Consensus        15 ~~~~l-~lYihiPF-C~~~C~yC~f~~~~~--------~~~~~~~~y~~~l~~Ei~~~~~~~~~~~~~~iy~GGGTPs~l   84 (395)
                      -+||+ .|.|+|-- |..+|.||.......        ......+ -+..+.+|+.   ++ +   +..+-|.||=|.+-
T Consensus         7 ~~r~~~~l~ieiT~~CNlrC~~C~~~~~~~~~~~~~~~~~~ls~e-~~~~li~~~~---~~-g---~~~v~~~GGEp~l~   78 (327)
T d1tv8a_           7 LGRPIRDLRLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFD-EMARIAKVYA---EL-G---VKKIRITGGEPLMR   78 (327)
T ss_dssp             TSCBCCEEEEECCSCCSCCCTTTSCTTTSSTTCCCCCGGGSCCHH-HHHHHHHHHH---HT-T---CCEEEEESSCGGGS
T ss_pred             CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH-HHHHHHHHHH---HC-C---CEEEEECCCCCCCC
T ss_conf             999208579972210089694789760167777647721459999-9999999998---75-9---83897379861246


Q ss_pred             CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHH-HHCCCCCHHHHHHHHH
Q ss_conf             999999999766404764443321133210410023477663034541143234332013455-4224431347899998
Q gi|254780628|r   85 EPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRF-LGRNHNASEAIAAIHL  163 (395)
Q Consensus        85 ~~~~l~~ll~~i~~~~~~~~~~e~t~E~~P~~~~~~~l~~l~~~Gv~RiS~GvQs~~~~~l~~-~~R~~~~~~~~~~~~~  163 (395)
                       ++-+..+....+.....     ..+=++=..++++.+..|++.|+++|++-+.+.+++.-.. .|+....+.+.++++.
T Consensus        79 -~~~~e~i~~~~~~~~~~-----~~~~Tng~ll~~~~~~~l~~~g~~~i~iSldg~~~e~~~~~rg~~g~~~~~~~~~~~  152 (327)
T d1tv8a_          79 -RDLDVLIAKLNQIDGIE-----DIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDY  152 (327)
T ss_dssp             -TTHHHHHHHHTTCTTCC-----EEEEEECSTTHHHHHHHHHHHTCCEEEEECCCSSHHHHHHHHSSCCCHHHHHHHHHH
T ss_pred             -CCHHHHHHHHHHHCCCC-----CCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHEEECCCCCHHHHHHHH
T ss_conf             -64799999875421222-----013444311120679999983998786202568787764510203542112368999


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
Q ss_conf             6302444333210002585432211127887531800
Q gi|254780628|r  164 ARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD  200 (395)
Q Consensus       164 ~~~~~~~v~iDli~GlPgqt~e~~~~~l~~~~~l~p~  200 (395)
                      +++++..+.+..+. .++...+.+..-++.+...+.+
T Consensus       153 ~~~~g~~~~~~~~v-~~~~n~~~~~~~~~~~~~~~~~  188 (327)
T d1tv8a_         153 ATSIGLNVKVNVVI-QKGINDDQIIPMLEYFKDKHIE  188 (327)
T ss_dssp             HHHTTCEEEEEEEE-CTTTTGGGHHHHHHHHHHTTCC
T ss_pred             HHHCCCCCCEEEEE-ECCCCCCCCHHHHHHHHHHCCC
T ss_conf             99859986325898-5683531008999999740654


No 4  
>d1r7ja_ a.4.5.49 (A:) Sso10a (SSO10449) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=94.17  E-value=0.13  Score=27.83  Aligned_cols=51  Identities=14%  Similarity=0.124  Sum_probs=40.8

Q ss_pred             CCCCCHHHHHHHHCCCHH--HHHHHHHHHCCCEEEEECCEEEECHHHHHHHHHH
Q ss_conf             379988899988389964--9999999987994985598999956758989999
Q gi|254780628|r  338 REGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSV  389 (395)
Q Consensus       338 ~~Gid~~~~~~~fg~~~~--~~~~~~L~~~Gli~~~~~~~l~lT~~G~~~~d~I  389 (395)
                      .+|.....+....+.++.  ..+++.|++.|+|+. +++.+.+|++|+.|++.+
T Consensus        16 ~~g~~kT~i~~~aNLs~~~~~kyl~~L~~~GLI~~-~~~~Y~iT~kG~~~L~~~   68 (90)
T d1r7ja_          16 KSGSPKTRIMYGANLSYALTGRYIKMLMDLEIIRQ-EGKQYMLTKKGEELLEDI   68 (90)
T ss_dssp             TTCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEE-ETTEEEECHHHHHHHHHH
T ss_pred             HCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCEEE-CCCEEEECCCHHHHHHHH
T ss_conf             67998207789719999999999999998889663-698789882189999999


No 5  
>d2v7fa1 a.4.5.84 (A:2-150) Ribosomal protein S19e {Pyrococcus abyssi [TaxId: 29292]}
Probab=93.77  E-value=0.2  Score=26.59  Aligned_cols=39  Identities=26%  Similarity=0.408  Sum_probs=31.7

Q ss_pred             HHHHHHHHHCCCEEEEECCEEEECHHHHHHHHHHHHHHC
Q ss_conf             999999998799498559899995675898999999861
Q gi|254780628|r  356 IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANLA  394 (395)
Q Consensus       356 ~~~~~~L~~~Gli~~~~~~~l~lT~~G~~~~d~I~~~l~  394 (395)
                      ...+++|++.|+++...++.=++|++|+-++|.|+.+++
T Consensus        98 R~~LQqLE~~glVek~~~~GR~lT~~G~~~LD~iA~~v~  136 (149)
T d2v7fa1          98 RKALQQLEAAGFVEKVPGKGRVITPKGRSFLDKIATELK  136 (149)
T ss_dssp             HHHHHHHHHTTSEEEETTTEEEECHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCEEECCCCCCEECHHHHHHHHHHHHHHH
T ss_conf             999999986888667699994778889999999999999


No 6  
>d3ctaa1 a.4.5.28 (A:5-89) Ta1064 (RFK), N-terminal domain {Thermoplasma acidophilum [TaxId: 2303]}
Probab=91.79  E-value=0.39  Score=24.63  Aligned_cols=54  Identities=20%  Similarity=0.321  Sum_probs=43.0

Q ss_pred             CCCHHHHHHHHCCCHH--HHHHHHHHHCCCEEEEECC---EEEECHHHHHHHHHHHHHH
Q ss_conf             9988899988389964--9999999987994985598---9999567589899999986
Q gi|254780628|r  340 GISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS---RLRCTQRGMTMLDSVIANL  393 (395)
Q Consensus       340 Gid~~~~~~~fg~~~~--~~~~~~L~~~Gli~~~~~~---~l~lT~~G~~~~d~I~~~l  393 (395)
                      +++..++.+..+.+..  ...++.|+++|||.+..++   .+.||++|+.++..+..++
T Consensus        21 ~lt~~eLa~~l~i~~~~vs~~l~~Le~~GlV~r~~D~R~~~i~LT~~G~~~l~~~~~~~   79 (85)
T d3ctaa1          21 YLTSSKLADMLGISQQSASRIIIDLEKNGYITRTVTKRGQILNITEKGLDVLYTEFADL   79 (85)
T ss_dssp             ECCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEEETTEEEEEECHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEECHHHHHHHHHHHHHH
T ss_conf             98899999998878878999999999879804312455430007899999999999999


No 7  
>d1qwga_ c.1.27.1 (A:) (2r)-phospho-3-sulfolactate synthase ComA {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=91.20  E-value=0.28  Score=25.64  Aligned_cols=121  Identities=14%  Similarity=0.053  Sum_probs=72.0

Q ss_pred             CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCC-----CCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCC
Q ss_conf             9505899962888887899999999976640476444-----33211332104100234776630345411432343320
Q gi|254780628|r   68 PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSS-----NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE  142 (395)
Q Consensus        68 ~~~~~~iy~GGGTPs~l~~~~l~~ll~~i~~~~~~~~-----~~e~t~E~~P~~~~~~~l~~l~~~Gv~RiS~GvQs~~~  142 (395)
                      +.-++.+-||+||-+++|.+.|++.++..+++ ++..     ..|+.+  .. ..-++.++..++.||+.|.+---|.+ 
T Consensus        36 g~yID~~K~g~Gt~~l~p~~~l~eKI~l~~~~-~V~v~~GGtlfE~a~--~q-g~~~~y~~~~~~lGf~~iEiSdg~~~-  110 (251)
T d1qwga_          36 GDYIDFVKFGWGTSAVIDRDVVKEKINYYKDW-GIKVYPGGTLFEYAY--SK-GKFDEFLNECEKLGFEAVEISDGSSD-  110 (251)
T ss_dssp             GGGCSEEEECTTGGGGSCHHHHHHHHHHHHTT-TCEEEECHHHHHHHH--HT-TCHHHHHHHHHHHTCCEEEECCSSSC-
T ss_pred             HHHEEEEEECCCEEEECCHHHHHHHHHHHHHC-CCEEECCCHHHHHHH--HC-CCHHHHHHHHHHCCCCEEEECCCCCC-
T ss_conf             43313898547565125879999999999985-993757967999999--74-97999999999859988997598567-


Q ss_pred             HHHHHHHCCCCCHHHHHHHHHHHCCCCC----CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCE
Q ss_conf             1345542244313478999986302444----33321000258543221112788753180012
Q gi|254780628|r  143 QSLRFLGRNHNASEAIAAIHLARNIFPR----MSFDLIYALPKQTMTQWEMELQRALSYAVDHL  202 (395)
Q Consensus       143 ~~l~~~~R~~~~~~~~~~~~~~~~~~~~----v~iDli~GlPgqt~e~~~~~l~~~~~l~p~~i  202 (395)
                               -+.++-.+.++.+++.+..    ++....-.---.+.+.|.+.++.-++.+.++|
T Consensus       111 ---------i~~~~~~~~I~~~~~~G~~V~~EvG~K~~~~~~~~~~~~~i~~~~~~LeaGA~~V  165 (251)
T d1qwga_         111 ---------ISLEERNNAIKRAKDNGFMVLTEVGKKMPDKDKQLTIDDRIKLINFDLDAGADYV  165 (251)
T ss_dssp             ---------CCHHHHHHHHHHHHHTTCEEEEEECCSSHHHHTTCCHHHHHHHHHHHHHHTCSEE
T ss_pred             ---------CCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
T ss_conf             ---------8989999999999858988952555788887655699999999999997787236


No 8  
>d2a61a1 a.4.5.28 (A:5-143) Transcriptional regulator TM0710 {Thermotoga maritima [TaxId: 2336]}
Probab=90.14  E-value=0.56  Score=23.62  Aligned_cols=69  Identities=16%  Similarity=0.240  Sum_probs=51.2

Q ss_pred             CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHH--HHHHHHHHHCCCEEEEEC------CEEEECHHHHHHHHHHHHH
Q ss_conf             49999899999996562379988899988389964--999999998799498559------8999956758989999998
Q gi|254780628|r  321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF------SRLRCTQRGMTMLDSVIAN  392 (395)
Q Consensus       321 Ls~~e~~~e~l~~~LR~~~Gid~~~~~~~fg~~~~--~~~~~~L~~~Gli~~~~~------~~l~lT~~G~~~~d~I~~~  392 (395)
                      +|..+.   .++..|.-..|++.+++.+..|.+-.  ...++.|++.|||.+..+      -.+.||++|+.+.+.+...
T Consensus        28 lt~~q~---~iL~~i~~~~~~t~~~la~~l~i~~~tvs~~l~~L~~~gli~r~~~~~D~R~~~i~LT~~G~~~~~~~~~~  104 (139)
T d2a61a1          28 ITPAQF---DILQKIYFEGPKRPGELSVLLGVAKSTVTGLVKRLEADGYLTRTPDPADRRAYFLVITRKGEEVIEKVIER  104 (139)
T ss_dssp             CCHHHH---HHHHHHHHHCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHHHHHHHHH
T ss_pred             CCHHHH---HHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEECCCCCCEEEEEECHHHHHHHHHHHHH
T ss_conf             799999---99999997699899999998398814426999999845725663216888867889898999999999999


No 9  
>d1s3ja_ a.4.5.28 (A:) Putative transcriptional regulator YusO {Bacillus subtilis [TaxId: 1423]}
Probab=89.90  E-value=0.58  Score=23.50  Aligned_cols=69  Identities=17%  Similarity=0.272  Sum_probs=49.7

Q ss_pred             CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHH--HHHHHHHHHCCCEEEEECC------EEEECHHHHHHHHHHHHH
Q ss_conf             49999899999996562379988899988389964--9999999987994985598------999956758989999998
Q gi|254780628|r  321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS------RLRCTQRGMTMLDSVIAN  392 (395)
Q Consensus       321 Ls~~e~~~e~l~~~LR~~~Gid~~~~~~~fg~~~~--~~~~~~L~~~Gli~~~~~~------~l~lT~~G~~~~d~I~~~  392 (395)
                      ++..+.   .++..|.-..|+..+++.+..+.+-.  ....+.|++.|||++..+.      .+.+|++|+.+.+.+...
T Consensus        33 lt~~q~---~iL~~l~~~~~~t~~~la~~~~i~~~~vs~~l~~L~~~glv~r~~~~~D~R~~~v~lT~~G~~~~~~~~~~  109 (143)
T d1s3ja_          33 VTPAQL---FVLASLKKHGSLKVSEIAERMEVKPSAVTLMADRLEQKNLIARTHNTKDRRVIDLSLTDEGDIKFEEVLAG  109 (143)
T ss_dssp             CCHHHH---HHHHHHHHHSEEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEECSSCTTSEEEEECHHHHHHHHHHHHH
T ss_pred             CCHHHH---HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEECHHHHHHHHHHHHH
T ss_conf             799999---99999997799899999999896988999999999973400131013788713778898899999999999


No 10 
>d2etha1 a.4.5.28 (A:1-140) Putative transcriptional regulator TM0816 {Thermotoga maritima [TaxId: 2336]}
Probab=89.81  E-value=0.59  Score=23.45  Aligned_cols=70  Identities=13%  Similarity=0.274  Sum_probs=52.7

Q ss_pred             ECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHH--HHHHHHHHHCCCEEEEE--CC----EEEECHHHHHHHHHHHH
Q ss_conf             549999899999996562379988899988389964--99999999879949855--98----99995675898999999
Q gi|254780628|r  320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQ--FS----RLRCTQRGMTMLDSVIA  391 (395)
Q Consensus       320 ~Ls~~e~~~e~l~~~LR~~~Gid~~~~~~~fg~~~~--~~~~~~L~~~Gli~~~~--~~----~l~lT~~G~~~~d~I~~  391 (395)
                      -+|..+.   +++..|....++...++.+..+.+-.  ....+.|++.|||++..  .|    .+.+|++|+.+++.+..
T Consensus        29 ~lt~~q~---~iL~~l~~~~~~t~~~La~~l~i~~~~vs~~v~~L~~~gli~r~~~~~D~R~~~l~lT~~G~~~~~~~~~  105 (140)
T d2etha1          29 DMKTTEL---YAFLYVALFGPKKMKEIAEFLSTTKSNVTNVVDSLEKRGLVVREMDPVDRRTYRVVLTEKGKEIFGEILS  105 (140)
T ss_dssp             HSBHHHH---HHHHHHHHHCCBCHHHHHHHTTSCHHHHHHHHHHHHHTTSEEEEECTTTSSCEEEEECHHHHHHHHHHHH
T ss_pred             CCCHHHH---HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCHHHHHHHHHHHH
T ss_conf             9999999---9999999869959999999989698799999999987889666313344532554038989999999999


Q ss_pred             H
Q ss_conf             8
Q gi|254780628|r  392 N  392 (395)
Q Consensus       392 ~  392 (395)
                      .
T Consensus       106 ~  106 (140)
T d2etha1         106 N  106 (140)
T ss_dssp             H
T ss_pred             H
T ss_conf             9


No 11 
>d2fxaa1 a.4.5.28 (A:6-167) Protease production regulatory protein Hpr {Bacillus subtilis [TaxId: 1423]}
Probab=89.71  E-value=0.6  Score=23.40  Aligned_cols=70  Identities=11%  Similarity=0.212  Sum_probs=50.8

Q ss_pred             ECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHH--HHHHHHHHHCCCEEEEECC------EEEECHHHHHHHHHHHH
Q ss_conf             549999899999996562379988899988389964--9999999987994985598------99995675898999999
Q gi|254780628|r  320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS------RLRCTQRGMTMLDSVIA  391 (395)
Q Consensus       320 ~Ls~~e~~~e~l~~~LR~~~Gid~~~~~~~fg~~~~--~~~~~~L~~~Gli~~~~~~------~l~lT~~G~~~~d~I~~  391 (395)
                      -||..+.   .++.-|....|+...++.+..+.+-.  ...++.|+++|||.+..+.      .+.+|++|+.+.+.+..
T Consensus        38 ~Lt~~q~---~vL~~l~~~~~~t~~~la~~~~l~~~tvs~~i~rL~~~gli~r~~~~~D~R~~~l~lT~~G~~~~~~~~~  114 (162)
T d2fxaa1          38 DLNINEH---HILWIAYQLNGASISEIAKFGVMHVSTAFNFSKKLEERGYLRFSKRLNDKRNTYVQLTEEGTEVFWSLLE  114 (162)
T ss_dssp             TCCHHHH---HHHHHHHHHTSEEHHHHHHHTTCCHHHHHHHHHHHHHHTSEEEECC------CEEEECHHHHHHHHHHHH
T ss_pred             CCCHHHH---HHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCHHHHHHHHHHHH
T ss_conf             9998999---9996521189918999999976994031998999997777234205665722452257769999999999


Q ss_pred             H
Q ss_conf             8
Q gi|254780628|r  392 N  392 (395)
Q Consensus       392 ~  392 (395)
                      .
T Consensus       115 ~  115 (162)
T d2fxaa1         115 E  115 (162)
T ss_dssp             H
T ss_pred             H
T ss_conf             9


No 12 
>d1jgsa_ a.4.5.28 (A:) Multiple antibiotic resistance repressor, MarR {Escherichia coli [TaxId: 562]}
Probab=89.60  E-value=0.61  Score=23.35  Aligned_cols=69  Identities=14%  Similarity=0.217  Sum_probs=51.3

Q ss_pred             CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHH--HHHHHHHHHCCCEEEEEC--C----EEEECHHHHHHHHHHHHH
Q ss_conf             49999899999996562379988899988389964--999999998799498559--8----999956758989999998
Q gi|254780628|r  321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF--S----RLRCTQRGMTMLDSVIAN  392 (395)
Q Consensus       321 Ls~~e~~~e~l~~~LR~~~Gid~~~~~~~fg~~~~--~~~~~~L~~~Gli~~~~~--~----~l~lT~~G~~~~d~I~~~  392 (395)
                      ||..+.   .++.-|....|+..+++.+..+.+-.  ....+.|+++|||++..+  |    .+.+|++|+.+.+.+...
T Consensus        32 Lt~~q~---~vL~~l~~~~~~t~~ela~~~~i~~~~vs~~v~~L~~~glv~r~~~~~D~R~~~i~lT~~G~~~~~~~~~~  108 (138)
T d1jgsa_          32 ITAAQF---KVLCSIRCAACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTTGGAAICEQCHQL  108 (138)
T ss_dssp             SCHHHH---HHHHHHHHHSSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECTTCSSCEEEEECHHHHHHHHHHHHH
T ss_pred             CCHHHH---HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHHHHHHHHHHHH
T ss_conf             899999---99886871809899999999787885799999987307877986316888736989898789999999999


No 13 
>d1lj9a_ a.4.5.28 (A:) Transcriptional regulator SlyA {Enterococcus faecalis [TaxId: 1351]}
Probab=88.96  E-value=0.68  Score=23.05  Aligned_cols=69  Identities=20%  Similarity=0.302  Sum_probs=50.7

Q ss_pred             CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCH--HHHHHHHHHHCCCEEEEEC--C----EEEECHHHHHHHHHHHHH
Q ss_conf             4999989999999656237998889998838996--4999999998799498559--8----999956758989999998
Q gi|254780628|r  321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQF--S----RLRCTQRGMTMLDSVIAN  392 (395)
Q Consensus       321 Ls~~e~~~e~l~~~LR~~~Gid~~~~~~~fg~~~--~~~~~~~L~~~Gli~~~~~--~----~l~lT~~G~~~~d~I~~~  392 (395)
                      +|..+.   .++..|.-..|+...++.+..+.+-  ....++.|++.|||.+..+  |    .+.+|++|+-+.+.+...
T Consensus        27 lt~~q~---~iL~~i~~~~~~t~~~la~~l~i~~~tvs~~l~~L~~~glI~r~~~~~D~R~~~l~LT~~G~~~~~~~~~~  103 (144)
T d1lj9a_          27 LTRGQY---LYLVRVCENPGIIQEKIAELIKVDRTTAARAIKRLEEQGFIYRQEDASNKKIKRIYATEKGKNVYPIIVRE  103 (144)
T ss_dssp             CTTTHH---HHHHHHHHSTTEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSSCTTCEEEEECHHHHHHHHHHHHH
T ss_pred             CCHHHH---HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             899999---99999982899899999998782471699999999960320105788999853125688899999999999


No 14 
>d1mkma1 a.4.5.33 (A:1-75) Transcriptional regulator IclR, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=88.32  E-value=0.75  Score=22.77  Aligned_cols=58  Identities=14%  Similarity=0.101  Sum_probs=48.1

Q ss_pred             HHCCCCCHHHHHHHHCCCHH--HHHHHHHHHCCCEEEEECCEEEECHHHHHHHHHHHHHH
Q ss_conf             62379988899988389964--99999999879949855989999567589899999986
Q gi|254780628|r  336 RLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIANL  393 (395)
Q Consensus       336 R~~~Gid~~~~~~~fg~~~~--~~~~~~L~~~Gli~~~~~~~l~lT~~G~~~~d~I~~~l  393 (395)
                      +...++..+++.+..|.+..  ...+..|++.||+++++++++.++++-..+...++.+|
T Consensus        16 ~~~~~~s~~eia~~~~~~~st~~rll~tL~~~g~l~~~~~g~y~lG~~l~~lg~~~l~~f   75 (75)
T d1mkma1          16 KNPGDVSVSEIAEKFNMSVSNAYKYMVVLEEKGFVLRKKDKRYVPGYKLIEYGSFVLRRF   75 (75)
T ss_dssp             HCSSCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEECTTSCEEECTHHHHHHHHHHHHC
T ss_pred             HCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCEEECHHHHHHHHHHHHCC
T ss_conf             579998999999997919999999999999889988899997863299999999998539


No 15 
>d2p8ta1 a.4.5.72 (A:14-82) Hypothetical protein PH0730 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=87.86  E-value=0.8  Score=22.59  Aligned_cols=62  Identities=18%  Similarity=0.090  Sum_probs=45.4

Q ss_pred             HHHHHHHHH-CCCCCHHHHHHHHCCCH--HHHHHHHHHHCCCEEEEECCEEEECHHHHHHHHHHHH
Q ss_conf             999996562-37998889998838996--4999999998799498559899995675898999999
Q gi|254780628|r  329 EFLMMGLRL-REGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA  391 (395)
Q Consensus       329 e~l~~~LR~-~~Gid~~~~~~~fg~~~--~~~~~~~L~~~Gli~~~~~~~l~lT~~G~~~~d~I~~  391 (395)
                      ++++..+.+ .++|-...+.+.-|..-  .....+.|.+.|+|+....+ ..+|++|..+++.+.+
T Consensus         5 ~~vl~~l~ll~qPiGRr~La~~L~l~Er~vRte~~~Lk~~gLI~~~~~G-m~lTe~G~~~l~~L~s   69 (69)
T d2p8ta1           5 EDVLAVIFLLKEPLGRKQISERLELGEGSVRTLLRKLSHLDIIRSKQRG-HFLTLKGKEIRDKLLS   69 (69)
T ss_dssp             HHHHHHHHHTTSCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEC--C-EEECHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCC-CEECHHHHHHHHHHHC
T ss_conf             9999999997188458999998298199999999999888986660798-7787848999999739


No 16 
>d2frha1 a.4.5.28 (A:102-216) Pleiotropic regulator of virulence genes, SarA {Staphylococcus aureus [TaxId: 1280]}
Probab=87.32  E-value=0.86  Score=22.38  Aligned_cols=71  Identities=10%  Similarity=0.125  Sum_probs=49.1

Q ss_pred             ECCHHHHHHHHHHHHHHHCC--CCCHHHHHHHHCCCH--HHHHHHHHHHCCCEEEEE--CC----EEEECHHHHHHHHHH
Q ss_conf             54999989999999656237--998889998838996--499999999879949855--98----999956758989999
Q gi|254780628|r  320 FLSSEQQADEFLMMGLRLRE--GISVKDWEMLAGRNL--DIECERNLQRQGFIERVQ--FS----RLRCTQRGMTMLDSV  389 (395)
Q Consensus       320 ~Ls~~e~~~e~l~~~LR~~~--Gid~~~~~~~fg~~~--~~~~~~~L~~~Gli~~~~--~~----~l~lT~~G~~~~d~I  389 (395)
                      .||..+...   +.-|....  ++...++.+..+.+-  ....++.|++.|||.+..  .|    .+.||++|+-+.+.+
T Consensus        30 ~Ls~~q~~v---L~~l~~~~~~~~t~~~la~~l~~~~~tvs~~i~~Le~~gli~r~~~~~D~R~~~i~LT~~G~~~~~~~  106 (115)
T d2frha1          30 SISFEEFAV---LTYISENKEKEYYLKDIINHLNYKQPQVVKAVKILSQEDYFDKKRNEHDERTVLILVNAQQRKKIESL  106 (115)
T ss_dssp             CCCHHHHHH---HHHHHHTCCSEEEHHHHHHHSSSHHHHHHHHHHHHHHTTSSCCBCCSSSSCCCEEECCSHHHHHHHHH
T ss_pred             CCCHHHHHH---HHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEECHHHHHHHHHH
T ss_conf             989999999---99998089999889999999797886899999999846651321013678647989898899999999


Q ss_pred             HHHH
Q ss_conf             9986
Q gi|254780628|r  390 IANL  393 (395)
Q Consensus       390 ~~~l  393 (395)
                      ..++
T Consensus       107 ~~~~  110 (115)
T d2frha1         107 LSRV  110 (115)
T ss_dssp             HHHH
T ss_pred             HHHH
T ss_conf             9999


No 17 
>d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=87.15  E-value=0.24  Score=25.99  Aligned_cols=65  Identities=18%  Similarity=0.093  Sum_probs=41.2

Q ss_pred             CCHHHHHHHHHHCCCCCEEE--ECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             10023477663034541143--2343320134554224431347899998630244433321000258
Q gi|254780628|r  116 SVEVNNFQGYRKAGVNRISL--GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK  181 (395)
Q Consensus       116 ~~~~~~l~~l~~~Gv~RiS~--GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli~GlPg  181 (395)
                      -+|++.++.+++.|+|-|.|  |-..|.+..-...-.....+.+.++++.+++.+..|-+|| -|+||
T Consensus        73 ~ite~D~~~i~~~G~N~VRiPi~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~gl~VilDl-H~~pG  139 (408)
T d1h4pa_          73 FYQEQDFANIASQGFNLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNSLKVWVDL-HGAAG  139 (408)
T ss_dssp             HSCHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCSSHHHHHHHHHHHHHHTTCEEEEEE-EECTT
T ss_pred             CCCHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE-CCCCC
T ss_conf             28899999999779987998544999347788877581589999999999998899899983-78998


No 18 
>d1lnwa_ a.4.5.28 (A:) MexR repressor {Pseudomonas aeruginosa [TaxId: 287]}
Probab=86.61  E-value=0.94  Score=22.13  Aligned_cols=70  Identities=16%  Similarity=0.203  Sum_probs=52.2

Q ss_pred             ECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHH--HHHHHHHHHCCCEEEEEC---C---EEEECHHHHHHHHHHHH
Q ss_conf             549999899999996562379988899988389964--999999998799498559---8---99995675898999999
Q gi|254780628|r  320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF---S---RLRCTQRGMTMLDSVIA  391 (395)
Q Consensus       320 ~Ls~~e~~~e~l~~~LR~~~Gid~~~~~~~fg~~~~--~~~~~~L~~~Gli~~~~~---~---~l~lT~~G~~~~d~I~~  391 (395)
                      -+|..+.   +++..|....|+..+++.+..+.+-.  ...++.|++.|||++..+   .   .+.+|++|+.+.+.+..
T Consensus        33 ~lt~~q~---~vL~~l~~~~~~t~~~la~~l~~~~~~vsr~l~~L~~~G~v~r~~~~~D~R~~~l~lT~~G~~~~~~~~~  109 (141)
T d1lnwa_          33 DLTPPDV---HVLKLIDEQRGLNLQDLGRQMCRDKALITRKIRELEGRNLVRRERNPSDQRSFQLFLTDEGLAIHQHAEA  109 (141)
T ss_dssp             CCCHHHH---HHHHHHHSSTTCBHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEECSSSSSSEEEEECHHHHHHHHHHHH
T ss_pred             CCCHHHH---HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCEEEECCCCCCCCHHHCCCHHHHHHHHHHHH
T ss_conf             9899999---9999999879989999999978457379999999998323011034788761112068989999999999


Q ss_pred             H
Q ss_conf             8
Q gi|254780628|r  392 N  392 (395)
Q Consensus       392 ~  392 (395)
                      .
T Consensus       110 ~  110 (141)
T d1lnwa_         110 I  110 (141)
T ss_dssp             H
T ss_pred             H
T ss_conf             9


No 19 
>d2bv6a1 a.4.5.28 (A:5-140) Transcriptional regulator MgrA {Staphylococcus aureus [TaxId: 1280]}
Probab=85.83  E-value=1  Score=21.87  Aligned_cols=67  Identities=13%  Similarity=0.082  Sum_probs=49.9

Q ss_pred             CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCH--HHHHHHHHHHCCCEEEEEC--C----EEEECHHHHHHHHHHH
Q ss_conf             4999989999999656237998889998838996--4999999998799498559--8----9999567589899999
Q gi|254780628|r  321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQF--S----RLRCTQRGMTMLDSVI  390 (395)
Q Consensus       321 Ls~~e~~~e~l~~~LR~~~Gid~~~~~~~fg~~~--~~~~~~~L~~~Gli~~~~~--~----~l~lT~~G~~~~d~I~  390 (395)
                      +|..+.   .++.-|....|++.+.+.+..+.+-  ....++.|++.|||++..+  |    .+.+|++|+.+.+.+.
T Consensus        32 lt~~q~---~vL~~i~~~~~~t~~~la~~l~~~~~~~s~~l~~L~~~Gli~r~~~~~D~R~~~l~lT~~G~~~~~~~~  106 (136)
T d2bv6a1          32 LTYPQF---LVLTILWDESPVNVKKVVTELALDTGTVSPLLKRMEQVDLIKRERSEVDQREVFIHLTDKSETIRPELS  106 (136)
T ss_dssp             CCHHHH---HHHHHHHHSSEEEHHHHHHHTTCCTTTHHHHHHHHHHTTSEEEEECSSSTTCEEEEECHHHHHHHHHHT
T ss_pred             CCHHHH---HHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHCCCHHHHHHHHHHH
T ss_conf             799999---999999728997999999997978837999999999789879743477664032114898999999999


No 20 
>d1ub9a_ a.4.5.28 (A:) Hypothetical protein PH1061 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=85.75  E-value=1  Score=21.85  Aligned_cols=64  Identities=16%  Similarity=0.134  Sum_probs=45.7

Q ss_pred             HHHHHHHHHCCCCCHHHHHHHHCCCHH--HHHHHHHHHCCCEEEEE--CC----EEEECHHHHHHHHHHHHH
Q ss_conf             999996562379988899988389964--99999999879949855--98----999956758989999998
Q gi|254780628|r  329 EFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQ--FS----RLRCTQRGMTMLDSVIAN  392 (395)
Q Consensus       329 e~l~~~LR~~~Gid~~~~~~~fg~~~~--~~~~~~L~~~Gli~~~~--~~----~l~lT~~G~~~~d~I~~~  392 (395)
                      ..++.-|....+++..++.+.+|.+-.  ...++.|++.|+|++..  .+    .+.+|++|+.........
T Consensus        19 ~~IL~~L~~~~~~~~~eLa~~l~is~~~vs~~l~~L~~~glV~~~~~~~d~r~~~~~LT~~G~~~~~~~~~~   90 (100)
T d1ub9a_          19 LGIMIFLLPRRKAPFSQIQKVLDLTPGNLDSHIRVLERNGLVKTYKVIADRPRTVVEITDFGMEEAKRFLSS   90 (100)
T ss_dssp             HHHHHHHHHHSEEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             999987604799019999999862543230999988231036888757677653455789999999999999


No 21 
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]}
Probab=85.15  E-value=1.1  Score=21.66  Aligned_cols=61  Identities=20%  Similarity=0.269  Sum_probs=36.3

Q ss_pred             CHHHHHHHHHHCCCCCEEEEC--CCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             002347766303454114323--4332013455422443134789999863024443332100
Q gi|254780628|r  117 VEVNNFQGYRKAGVNRISLGV--QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIY  177 (395)
Q Consensus       117 ~~~~~l~~l~~~Gv~RiS~Gv--Qs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli~  177 (395)
                      ..++.++.||++|||-|.+.|  .-.+.+.-...+-....+.+.++++.+++.+..|-+||-|
T Consensus        39 ~~~d~~~~lk~~G~n~VRl~vw~~~~~~~~~~~~~g~~~l~~~~~~~~~a~~~Gl~v~ldlH~  101 (387)
T d1ur4a_          39 KKQDIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEKAIQIGKRATANGMKLLADFHY  101 (387)
T ss_dssp             CBCCHHHHHHHTTCCEEEEEECSCCBCTTCCBCSTTCCCHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred             CCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             710599999983998799404447743335767776242999999999999879979998677


No 22 
>d2ptza1 c.1.11.1 (A:139-429) Enolase {Trypanosoma brucei [TaxId: 5691]}
Probab=85.08  E-value=1.1  Score=21.64  Aligned_cols=33  Identities=15%  Similarity=0.277  Sum_probs=12.7

Q ss_pred             CCCCCCCCCHHHHHH-HHHHHHHCCCCCCCCCCCC
Q ss_conf             288888789999999-9976640476444332113
Q gi|254780628|r   77 GGGTPSLIEPQNIAL-ILDGIAKNWTVSSNVEITI  110 (395)
Q Consensus        77 GGGTPs~l~~~~l~~-ll~~i~~~~~~~~~~e~t~  110 (395)
                      ||=.|.+.++++... |.+++.+ -+..++..+.+
T Consensus        71 GGfaP~~~~~e~aL~ll~eAi~~-ag~~~~~~i~l  104 (291)
T d2ptza1          71 GGFAPPIKDINEPLPILMEAIEE-AGHRGKFAICM  104 (291)
T ss_dssp             SSBCCSCCCTTTHHHHHHHHHHH-TTCTTSCEEEE
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHH-CCCCCCEEEEE
T ss_conf             11234441209999999999997-38888736886


No 23 
>d2hr3a1 a.4.5.28 (A:2-146) Probable transcriptional regulator PA3067 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=84.70  E-value=1.2  Score=21.53  Aligned_cols=63  Identities=16%  Similarity=0.144  Sum_probs=45.4

Q ss_pred             HHHHHHHHCC-CCCHHHHHHHHCCCHH--HHHHHHHHHCCCEEEEEC--C----EEEECHHHHHHHHHHHHH
Q ss_conf             9999656237-9988899988389964--999999998799498559--8----999956758989999998
Q gi|254780628|r  330 FLMMGLRLRE-GISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF--S----RLRCTQRGMTMLDSVIAN  392 (395)
Q Consensus       330 ~l~~~LR~~~-Gid~~~~~~~fg~~~~--~~~~~~L~~~Gli~~~~~--~----~l~lT~~G~~~~d~I~~~  392 (395)
                      .++..|--.. ++....+.+..|.+-.  ...++.|++.|||++..+  |    .+.||++|+.+.+.+...
T Consensus        38 ~vL~~L~~~~g~~t~~~La~~~~~~~~~vs~~i~~L~~~glv~r~~~~~DrR~~~i~LT~~G~~~~~~~~~~  109 (145)
T d2hr3a1          38 VVLGAIDRLGGDVTPSELAAAERMRSSNLAALLRELERGGLIVRHADPQDGRRTRVSLSSEGRRNLYGNRAK  109 (145)
T ss_dssp             HHHHHHHHTTSCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEC------CCEEEECHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHH
T ss_conf             999999985999799999999798988999999999876986763275401577733678999999999999


No 24 
>d1hsja1 a.4.5.28 (A:373-487) Staphylococcal accessory regulator A homolog, SarR {Staphylococcus aureus [TaxId: 1280]}
Probab=84.70  E-value=1.1  Score=21.72  Aligned_cols=72  Identities=13%  Similarity=0.084  Sum_probs=51.0

Q ss_pred             EECCHHHHHHHHHHHHHHH--CCCCCHHHHHHHHCCCHH--HHHHHHHHHCCCEEEEE--CC----EEEECHHHHHHHHH
Q ss_conf             4549999899999996562--379988899988389964--99999999879949855--98----99995675898999
Q gi|254780628|r  319 EFLSSEQQADEFLMMGLRL--REGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQ--FS----RLRCTQRGMTMLDS  388 (395)
Q Consensus       319 ~~Ls~~e~~~e~l~~~LR~--~~Gid~~~~~~~fg~~~~--~~~~~~L~~~Gli~~~~--~~----~l~lT~~G~~~~d~  388 (395)
                      .-||..+..   ++.-|..  ..|+...++.+..+.+-.  ...++.|++.|||.+..  +|    .+.||++|+-.++.
T Consensus        28 ~~Lt~~q~~---vL~~l~~~~~~~~t~~ela~~l~~~~~~vs~~i~~Le~~gli~r~~~~~D~R~~~i~LT~~G~~~~~~  104 (115)
T d1hsja1          28 FNLNYEEIY---ILNHILRSESNEISSKEIAKCSEFKPYYLTKALQKLKDLKLLSKKRSLQDERTVIVYVTDTQKANIQK  104 (115)
T ss_dssp             CCCCHHHHH---HHHHHHTCSCSEEEHHHHHHSSCCCHHHHHHHHHHHHTTTTSCCEECCSSSSCCEEECCSSHHHHHHH
T ss_pred             CCCCHHHHH---HHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECHHHHHHHHH
T ss_conf             599999999---99999806899948999999978885359999999998687698760477845898999899999999


Q ss_pred             HHHHH
Q ss_conf             99986
Q gi|254780628|r  389 VIANL  393 (395)
Q Consensus       389 I~~~l  393 (395)
                      ++.++
T Consensus       105 ~~~~~  109 (115)
T d1hsja1         105 LISEL  109 (115)
T ss_dssp             HHHHH
T ss_pred             HHHHH
T ss_conf             99999


No 25 
>d1qpoa1 c.1.17.1 (A:117-285) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=84.61  E-value=0.47  Score=24.09  Aligned_cols=14  Identities=21%  Similarity=0.159  Sum_probs=5.5

Q ss_pred             HHHHHHCCCCCEEE
Q ss_conf             78875318001234
Q gi|254780628|r  191 LQRALSYAVDHLSL  204 (395)
Q Consensus       191 l~~~~~l~p~~is~  204 (395)
                      +......++|.||.
T Consensus       140 i~~ya~~GvD~IS~  153 (169)
T d1qpoa1         140 AATYAETGVDYLAV  153 (169)
T ss_dssp             HHHHHHTTCSEEEC
T ss_pred             HHHHHHCCCCEEEC
T ss_conf             99999739999987


No 26 
>d2fbia1 a.4.5.28 (A:5-140) Probable transcriptional regulator PA4135 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=84.44  E-value=1.2  Score=21.46  Aligned_cols=70  Identities=17%  Similarity=0.122  Sum_probs=50.6

Q ss_pred             ECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHH--HHHHHHHHHCCCEEEEE--CC----EEEECHHHHHHHHHHHH
Q ss_conf             549999899999996562379988899988389964--99999999879949855--98----99995675898999999
Q gi|254780628|r  320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQ--FS----RLRCTQRGMTMLDSVIA  391 (395)
Q Consensus       320 ~Ls~~e~~~e~l~~~LR~~~Gid~~~~~~~fg~~~~--~~~~~~L~~~Gli~~~~--~~----~l~lT~~G~~~~d~I~~  391 (395)
                      -+|..+.   .++.-|....++..+++.+..+.+-.  ...++.|++.|||++..  +|    .+.+|++|+.+.+.+..
T Consensus        27 glt~~q~---~vL~~l~~~~~~t~~~la~~~~i~~~~vs~~i~~L~~~gli~r~~~~~D~R~~~l~lT~~G~~~~~~~~~  103 (136)
T d2fbia1          27 GLTEQQW---RVIRILRQQGEMESYQLANQACILRPSMTGVLARLERDGIVRRWKAPKDQRRVYVNLTEKGQQCFVSMSG  103 (136)
T ss_dssp             TCCHHHH---HHHHHHHHHCSEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHHHHHHHH
T ss_pred             CCCHHHH---HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCHHHHHHHHHHHH
T ss_conf             9799999---9999999769989999999988789889999999998899798455765750333058989999999999


Q ss_pred             H
Q ss_conf             8
Q gi|254780628|r  392 N  392 (395)
Q Consensus       392 ~  392 (395)
                      .
T Consensus       104 ~  104 (136)
T d2fbia1         104 D  104 (136)
T ss_dssp             H
T ss_pred             H
T ss_conf             9


No 27 
>d1o4ua1 c.1.17.1 (A:104-273) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=84.18  E-value=0.4  Score=24.55  Aligned_cols=88  Identities=15%  Similarity=0.163  Sum_probs=36.3

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCC
Q ss_conf             99997664047644433211332104100234776630345411432343320134554224431347899998630244
Q gi|254780628|r   90 ALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFP  169 (395)
Q Consensus        90 ~~ll~~i~~~~~~~~~~e~t~E~~P~~~~~~~l~~l~~~Gv~RiS~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~  169 (395)
                      .+.+..+++..+..  ..|.+|+  ++  .+.+....+.|+++|-+-              +.+++++.++++.++..++
T Consensus        65 ~~~~~~~~~~~~~~--~~I~VEv--~~--~~e~~~a~~~g~d~i~LD--------------n~~pe~~k~~~~~lk~~~~  124 (170)
T d1o4ua1          65 ERAVQEVRKIIPFT--TKIEVEV--EN--LEDALRAVEAGADIVMLD--------------NLSPEEVKDISRRIKDINP  124 (170)
T ss_dssp             HHHHHHHHTTSCTT--SCEEEEE--SS--HHHHHHHHHTTCSEEEEE--------------SCCHHHHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHCCCC--CEEEEEE--CC--HHHHHHHHHCCCCEEEEC--------------CCCHHHHHHHHHHHHHHCC
T ss_conf             88999988517988--5699970--83--999999884575599985--------------7572667679999986089


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEE
Q ss_conf             43332100025854322111278875318001234
Q gi|254780628|r  170 RMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSL  204 (395)
Q Consensus       170 ~v~iDli~GlPgqt~e~~~~~l~~~~~l~p~~is~  204 (395)
                      ++-+..-=|.--++.       ....+.++|-|++
T Consensus       125 ~i~lEaSGGI~~~ni-------~~~a~~GVD~Is~  152 (170)
T d1o4ua1         125 NVIVEVSGGITEENV-------SLYDFETVDVISS  152 (170)
T ss_dssp             TSEEEEEECCCTTTG-------GGGCCTTCCEEEE
T ss_pred             CEEEEEECCCCHHHH-------HHHHHCCCCEEEC
T ss_conf             679998789999999-------9999759999986


No 28 
>d3deua1 a.4.5.28 (A:2-141) Transcriptional regulator SlyA {Salmonella typhimurium [TaxId: 90371]}
Probab=83.80  E-value=1.3  Score=21.28  Aligned_cols=69  Identities=14%  Similarity=0.212  Sum_probs=49.0

Q ss_pred             CCHHHHHHHHHHHHHH-HCCCCCHHHHHHHHCCCH--HHHHHHHHHHCCCEEEEEC--C----EEEECHHHHHHHHHHHH
Q ss_conf             4999989999999656-237998889998838996--4999999998799498559--8----99995675898999999
Q gi|254780628|r  321 LSSEQQADEFLMMGLR-LREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQF--S----RLRCTQRGMTMLDSVIA  391 (395)
Q Consensus       321 Ls~~e~~~e~l~~~LR-~~~Gid~~~~~~~fg~~~--~~~~~~~L~~~Gli~~~~~--~----~l~lT~~G~~~~d~I~~  391 (395)
                      +|..+.   .++..|. ...|+...++.+..+.+-  ....++.|+++|||.+..+  |    .+.+|++|+.+.+.+..
T Consensus        29 lt~~~~---~~L~~l~~~~~~~t~~~la~~l~i~~~~vs~~l~~L~~~glI~~~~~~~D~R~~~l~lT~~G~~~~~~~~~  105 (140)
T d3deua1          29 LTQTHW---VTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEDKGLISRQTCASDRRAKRIKLTEKAEPLIAEMEE  105 (140)
T ss_dssp             CCHHHH---HHHHHHHHSCSSEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEC--------CEEEECGGGHHHHHHHHH
T ss_pred             CCHHHH---HHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEECHHHHHHHHHHHH
T ss_conf             799999---99999987499956999999978777678899999970897775166789881056889889999999999


Q ss_pred             H
Q ss_conf             8
Q gi|254780628|r  392 N  392 (395)
Q Consensus       392 ~  392 (395)
                      .
T Consensus       106 ~  106 (140)
T d3deua1         106 V  106 (140)
T ss_dssp             H
T ss_pred             H
T ss_conf             9


No 29 
>d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=83.27  E-value=0.73  Score=22.86  Aligned_cols=78  Identities=19%  Similarity=0.155  Sum_probs=53.3

Q ss_pred             CCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCC-CCHHHHHHHHHHHCC----CCCCCCCCCCCCCCCCCCCC
Q ss_conf             1041002347766303454114323433201345542244-313478999986302----44433321000258543221
Q gi|254780628|r  113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNH-NASEAIAAIHLARNI----FPRMSFDLIYALPKQTMTQW  187 (395)
Q Consensus       113 ~P~~~~~~~l~~l~~~Gv~RiS~GvQs~~~~~l~~~~R~~-~~~~~~~~~~~~~~~----~~~v~iDli~GlPgqt~e~~  187 (395)
                      -|.+-+.+.|..|.++|+|-+.+..             .| +.++..+.++.+|++    +..+.+.+=.-.|.-|..++
T Consensus        11 GPas~~~~~l~~li~aGvdv~RlN~-------------SHg~~~~~~~~i~~ir~~~~~~~~~~~I~~Dl~gp~ltekD~   77 (246)
T d1e0ta2          11 GPKTESEEMLAKMLDAGMNVMRLNF-------------SHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPALAEKDK   77 (246)
T ss_dssp             CGGGCSHHHHHHHHHHTEEEEEEET-------------TSSCHHHHHHHHHHHHHHHHHHTCCCEEEEECCCCSSCHHHH
T ss_pred             CCCCCCHHHHHHHHHCCCCEEEEEC-------------CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf             8886999999999987999999988-------------889999999999999999998199976533445444666731


Q ss_pred             CCCHHHHHHCCCCCEEE
Q ss_conf             11278875318001234
Q gi|254780628|r  188 EMELQRALSYAVDHLSL  204 (395)
Q Consensus       188 ~~~l~~~~~l~p~~is~  204 (395)
                       ++++.++++++|.|.+
T Consensus        78 -~~i~~a~~~~vD~ial   93 (246)
T d1e0ta2          78 -QDLIFGCEQGVDFVAA   93 (246)
T ss_dssp             -HHHHHHHHHTCSEEEE
T ss_pred             -HHHHHHHHCCCCEEEE
T ss_conf             -4566898739999998


No 30 
>d1u83a_ c.1.27.1 (A:) (2r)-phospho-3-sulfolactate synthase ComA {Bacillus subtilis [TaxId: 1423]}
Probab=83.20  E-value=1.3  Score=21.12  Aligned_cols=119  Identities=15%  Similarity=0.159  Sum_probs=60.2

Q ss_pred             CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC-CCC-CCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHH
Q ss_conf             950589996288888789999999997664047644433211-332-104100234776630345411432343320134
Q gi|254780628|r   68 PRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEIT-IEA-NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSL  145 (395)
Q Consensus        68 ~~~~~~iy~GGGTPs~l~~~~l~~ll~~i~~~~~~~~~~e~t-~E~-~P~~~~~~~l~~l~~~Gv~RiS~GvQs~~~~~l  145 (395)
                      +.-++.+-||+||- ++.+. |.+.++..+++ ++..-.-=| +|. --...-++.++..++.||+.|.+---|.+    
T Consensus        39 g~yID~vK~g~Gts-~l~~~-L~eKI~l~~~~-~V~v~~GGtlfE~a~~~~~~~~y~~~~~~lGf~~iEiSdg~i~----  111 (249)
T d1u83a_          39 SDYIDFVKFGWGTS-LLTKD-LEEKISTLKEH-DITFFFGGTLFEKYVSQKKVNEFHRYCTYFGCEYIEISNGTLP----  111 (249)
T ss_dssp             GGGCCEEEECTTGG-GGCTT-HHHHHHHHHHT-TCEEEECHHHHHHHHHTTCHHHHHHHHHHTTCSEEEECCSSSC----
T ss_pred             HHHEEEEEECCCEE-CCCHH-HHHHHHHHHHC-CCEEECCCHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCC----
T ss_conf             33415788548500-03788-99999999986-9958579899999998199999999999859988997798455----


Q ss_pred             HHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC------CCCCCCCCCCCHHHHHHCCCCCE
Q ss_conf             5542244313478999986302444333210002------58543221112788753180012
Q gi|254780628|r  146 RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYAL------PKQTMTQWEMELQRALSYAVDHL  202 (395)
Q Consensus       146 ~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli~Gl------Pgqt~e~~~~~l~~~~~l~p~~i  202 (395)
                            -+.++-.+.++.+++.|..++ .  +|-      .-.+.+.|.+.++.-++.+.++|
T Consensus       112 ------i~~~~~~~~I~~~~~~~~V~s-E--vG~K~~~~~~~~~~~~~i~~~~~~LeaGA~~V  165 (249)
T d1u83a_         112 ------MTNKEKAAYIADFSDEFLVLS-E--VGSKDAELASRQSSEEWLEYIVEDMEAGAEKV  165 (249)
T ss_dssp             ------CCHHHHHHHHHHHTTTSEEEE-E--CSCCC------CCSTHHHHHHHHHHHHTEEEE
T ss_pred             ------CCHHHHHHHHHHHHHCCEECC-C--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
T ss_conf             ------899999999999996695255-3--57767644577899999999999997788068


No 31 
>d1qapa1 c.1.17.1 (A:130-296) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=82.67  E-value=0.51  Score=23.87  Aligned_cols=25  Identities=20%  Similarity=0.291  Sum_probs=14.2

Q ss_pred             CCCCCCCHHHHHHHHHHCCCC-CEEE
Q ss_conf             321041002347766303454-1143
Q gi|254780628|r  111 EANPSSVEVNNFQGYRKAGVN-RISL  135 (395)
Q Consensus       111 E~~P~~~~~~~l~~l~~~Gv~-RiS~  135 (395)
                      .+.|+.-..++-+.....|.| |+.+
T Consensus        24 KT~PGlR~l~k~Av~~GGg~~HR~gL   49 (167)
T d1qapa1          24 KTLPGLRTALKYAVLCGGGANHRLGL   49 (167)
T ss_dssp             CCCTTCHHHHHHHHHHHTCBCCCSSS
T ss_pred             CCCCCHHHHHHHHHHHHCCCCCCCCC
T ss_conf             88815689999999981660034887


No 32 
>d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain {Bacillus cereus [TaxId: 1396]}
Probab=82.06  E-value=0.95  Score=22.08  Aligned_cols=143  Identities=13%  Similarity=0.145  Sum_probs=69.9

Q ss_pred             HHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH-----HHHHHHHHCCCCCE
Q ss_conf             9999876189505899962888887899999999976640476444332113321041002-----34776630345411
Q gi|254780628|r   59 MQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEV-----NNFQGYRKAGVNRI  133 (395)
Q Consensus        59 i~~~~~~~~~~~~~~iy~GGGTPs~l~~~~l~~ll~~i~~~~~~~~~~e~t~E~~P~~~~~-----~~l~~l~~~Gv~Ri  133 (395)
                      |+.+++.--.+-++|+..=.+.+.-. .+.+++|++..++.     +-++.+..+|..+..     +.+..+++.|++-|
T Consensus        23 i~~a~~~Gf~~iFTSL~~~e~~~~~~-~~~~~~l~~~a~~~-----g~~vi~DIsp~~l~~lg~s~~dl~~~~~lGi~gl   96 (244)
T d1x7fa2          23 ISAAARHGFSRIFTCLLSVNRPKEEI-VAEFKEIINHAKDN-----NMEVILDVAPAVFDQLGISYSDLSFFAELGADGI   96 (244)
T ss_dssp             HHHHHTTTEEEEEEEECCC---------HHHHHHHHHHHHT-----TCEEEEEECTTCC------CCCTHHHHHHTCSEE
T ss_pred             HHHHHHCCCCEEEECCCCCCCCHHHH-HHHHHHHHHHHHHC-----CCEEEEECCHHHHHHHCCCHHHHHHHHHCCCCEE
T ss_conf             99999879988971376678887899-99999999999987-----9999998688889780999777999997799889


Q ss_pred             --EEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC--CE-EEEEEE
Q ss_conf             --4323433201345542244313478999986302444333210002585432211127887531800--12-346468
Q gi|254780628|r  134 --SLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVD--HL-SLYQLT  208 (395)
Q Consensus       134 --S~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli~GlPgqt~e~~~~~l~~~~~l~p~--~i-s~Y~l~  208 (395)
                        -.|.               +.++......+-......+|+      -  |   ....++.+++.+|+  +| .++.+.
T Consensus        97 RlD~Gf---------------~~~e~a~ms~n~~~l~I~LNa------S--t---~t~~l~~l~~~~~n~~~l~acHNFY  150 (244)
T d1x7fa2          97 RLDVGF---------------DGLTEAKMTNNPYGLKIELNV------S--N---DIAYLENILSHQANKSALIGCHNFY  150 (244)
T ss_dssp             EESSCC---------------SSHHHHHHTTCTTCCEEEEET------T--S---CSSHHHHHTTSSCCGGGEEEECCCB
T ss_pred             EECCCC---------------CHHHHHHHHCCCCCCEEEEEC------C--C---CHHHHHHHHHCCCCHHHEEEEECCC
T ss_conf             973899---------------867999984487587799978------7--6---7899999998098766668864567


Q ss_pred             EECCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             82596000145449802110356788999865578870962
Q gi|254780628|r  209 IEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH  249 (395)
Q Consensus       209 i~~~t~l~~~~~~~~~~~p~~~~~~~~~~~a~e~L~~~GY~  249 (395)
                      +.|.|.|.                .+.+...-+.+++.|..
T Consensus       151 Pr~~TGLs----------------~~~f~~~n~~~k~~gi~  175 (244)
T d1x7fa2         151 PQKFTGLP----------------YDYFIRCSERFKKHGIR  175 (244)
T ss_dssp             CSTTCSBC----------------HHHHHHHHHHHHHTTCC
T ss_pred             CCCCCCCC----------------HHHHHHHHHHHHHCCCC
T ss_conf             99887889----------------99999999999975997


No 33 
>d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]}
Probab=80.95  E-value=1.5  Score=20.68  Aligned_cols=119  Identities=12%  Similarity=0.103  Sum_probs=62.3

Q ss_pred             CCHHHHHHHHHHCCCCCEEEEC--CCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC-----CCCCCCCCCCCC
Q ss_conf             1002347766303454114323--433201345542244313478999986302444333210-----002585432211
Q gi|254780628|r  116 SVEVNNFQGYRKAGVNRISLGV--QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLI-----YALPKQTMTQWE  188 (395)
Q Consensus       116 ~~~~~~l~~l~~~Gv~RiS~Gv--Qs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli-----~GlPgqt~e~~~  188 (395)
                      ..+++.++.+++.|+|-|-|.|  +.+.+.-...--.....+.+.++++.+.+.+..|-+|+=     ++-+..+.+.+.
T Consensus        31 ~~t~~di~~l~~~G~N~VRlPv~~~~~~~~~~~~~~~~~~~~~l~~~v~~a~~~gl~vIlD~H~~~~~~~~~~~~~~~~~  110 (305)
T d1h1na_          31 WPDPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQKGAYAVVDPHNYGRYYNSIISSPSDFE  110 (305)
T ss_dssp             CCCHHHHHHHHHTTCCEEEEEECHHHHSCSSTTSCCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTEETTEECCCHHHHH
T ss_pred             CCCHHHHHHHHHCCCCEEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHH
T ss_conf             68999999999879998985103999066777885198999999999999985687299704457755556320489999


Q ss_pred             CCHHHHHH-C-CCCCEEEEEEEEECCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             12788753-1-800123464688259600014544980211035678899986557887096
Q gi|254780628|r  189 MELQRALS-Y-AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGL  248 (395)
Q Consensus       189 ~~l~~~~~-l-~p~~is~Y~l~i~~~t~l~~~~~~~~~~~p~~~~~~~~~~~a~e~L~~~GY  248 (395)
                      .--+.+.+ + ..++| +|.+.=||...             +.+.-.++++.+.+..++.|-
T Consensus       111 ~~W~~ia~~~~~~~~v-~~el~NEP~~~-------------~~~~w~~~~~~~~~~IR~~~~  158 (305)
T d1h1na_         111 TFWKTVASQFASNPLV-IFDTDNEYHDM-------------DQTLVLNLNQAAIDGIRSAGA  158 (305)
T ss_dssp             HHHHHHHHTSTTCTTE-EEECCSCCCSS-------------CHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHCCCCEE-EEEECCCCCCC-------------CHHHHHHHHHHHHHHHHHCCC
T ss_conf             9999999983789716-98713677875-------------179999999999999985489


No 34 
>d3broa1 a.4.5.28 (A:3-137) Transcriptional regulator OEOE1854 {Oenococcus oeni [TaxId: 1247]}
Probab=80.08  E-value=1.7  Score=20.40  Aligned_cols=71  Identities=11%  Similarity=0.056  Sum_probs=49.1

Q ss_pred             ECCHHHHHHHHHHHHHHHC--CCCCHHHHHHHHCCCHH--HHHHHHHHHCCCEEEEECC------EEEECHHHHHHHHHH
Q ss_conf             5499998999999965623--79988899988389964--9999999987994985598------999956758989999
Q gi|254780628|r  320 FLSSEQQADEFLMMGLRLR--EGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS------RLRCTQRGMTMLDSV  389 (395)
Q Consensus       320 ~Ls~~e~~~e~l~~~LR~~--~Gid~~~~~~~fg~~~~--~~~~~~L~~~Gli~~~~~~------~l~lT~~G~~~~d~I  389 (395)
                      -+|..+...   +.-|.-.  .++...++.+..+.+-.  ...++.|++.|||.+..+.      .+.+|++|+.+...+
T Consensus        26 glt~~q~~v---L~~l~~~~~~~it~~ela~~~~~~~~~vs~~l~~L~~~g~v~r~~~~~D~R~~~i~lT~~G~~~~~~~  102 (135)
T d3broa1          26 DLTGTQMTI---IDYLSRNKNKEVLQRDLESEFSIKSSTATVLLQRMEIKKLLYRKVSGKDSRQKCLKLTKKANKLETII  102 (135)
T ss_dssp             TCCHHHHHH---HHHHHHTTTSCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSSCTTSEEEEECHHHHTTHHHH
T ss_pred             CCCHHHHHH---HHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf             999999999---99999707999999999999896886899999999888888888610025666520457799999999


Q ss_pred             HHHH
Q ss_conf             9986
Q gi|254780628|r  390 IANL  393 (395)
Q Consensus       390 ~~~l  393 (395)
                      ...+
T Consensus       103 ~~~~  106 (135)
T d3broa1         103 LSYM  106 (135)
T ss_dssp             HHHH
T ss_pred             HHHH
T ss_conf             9999


No 35 
>d1nvma2 c.1.10.5 (A:2-290) 4-hydroxy-2-oxovalerate aldolase DmpG, catalytic domain {Pseudomonas sp. [TaxId: 306]}
Probab=80.04  E-value=1.7  Score=20.39  Aligned_cols=74  Identities=16%  Similarity=0.095  Sum_probs=41.3

Q ss_pred             CCCCCHHHHHHHHHHCCCCCEE--EECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC---CCCCCC
Q ss_conf             1041002347766303454114--32343320134554224431347899998630244433321000258---543221
Q gi|254780628|r  113 NPSSVEVNNFQGYRKAGVNRIS--LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK---QTMTQW  187 (395)
Q Consensus       113 ~P~~~~~~~l~~l~~~Gv~RiS--~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli~GlPg---qt~e~~  187 (395)
                      .+.....+.+....+.|++.+-  ..++              ......+.++.+++.+..+.    ++++.   -+.+.+
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~--------------~~~~~~~~~~~a~~~g~~~~----~~~~~~~~~~~~~~  150 (289)
T d1nvma2          89 LPGIGSVHDLKNAYQAGARVVRVATHCT--------------EADVSKQHIEYARNLGMDTV----GFLMMSHMIPAEKL  150 (289)
T ss_dssp             CBTTBCHHHHHHHHHHTCCEEEEEEETT--------------CGGGGHHHHHHHHHHTCEEE----EEEESTTSSCHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCCEEEEEEHH--------------HHHHHHHHHHHHHHHCCCEE----EEEEECCCCCCHHH
T ss_conf             6302118899999970456168873210--------------33667678999997077324----67640235671144


Q ss_pred             CCCHHHHHHCCCCCEEE
Q ss_conf             11278875318001234
Q gi|254780628|r  188 EMELQRALSYAVDHLSL  204 (395)
Q Consensus       188 ~~~l~~~~~l~p~~is~  204 (395)
                      .+..+.+.+++++.|++
T Consensus       151 ~~~~~~~~~~g~~~I~l  167 (289)
T d1nvma2         151 AEQGKLMESYGATCIYM  167 (289)
T ss_dssp             HHHHHHHHHHTCSEEEE
T ss_pred             HHHHHHHCCCCCEEEEE
T ss_conf             67887640221103443


No 36 
>d2al1a1 c.1.11.1 (A:142-436) Enolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=80.02  E-value=1  Score=21.90  Aligned_cols=39  Identities=10%  Similarity=0.190  Sum_probs=20.3

Q ss_pred             HCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             22443134789999863024443332100025854322111
Q gi|254780628|r  149 GRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM  189 (395)
Q Consensus       149 ~R~~~~~~~~~~~~~~~~~~~~v~iDli~GlPgqt~e~~~~  189 (395)
                      ++.-++++..+.+..+-+-++-++|  .=+|..+..++|..
T Consensus       129 ~~~~s~~elid~y~~li~~YPIisI--EDp~~e~D~~gw~~  167 (295)
T d2al1a1         129 SKWLTGPQLADLYHSLMKRYPIVSI--EDPFAEDDWEAWSH  167 (295)
T ss_dssp             GGCBCHHHHHHHHHHHHHHSCEEEE--ECCSCTTCHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHCCEEEE--CCCCCCCCHHHHHH
T ss_conf             6414459999999999974887774--17768421678998


No 37 
>d1p4xa2 a.4.5.28 (A:126-250) Staphylococcal accessory regulator A homolog, SarS {Staphylococcus aureus [TaxId: 1280]}
Probab=79.56  E-value=1.8  Score=20.30  Aligned_cols=72  Identities=13%  Similarity=0.133  Sum_probs=49.7

Q ss_pred             EECCHHHHHHHHHHHHH--HHCCCCCHHHHHHHHCCCHH--HHHHHHHHHCCCEEEEE--CC----EEEECHHHHHHHHH
Q ss_conf             45499998999999965--62379988899988389964--99999999879949855--98----99995675898999
Q gi|254780628|r  319 EFLSSEQQADEFLMMGL--RLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQ--FS----RLRCTQRGMTMLDS  388 (395)
Q Consensus       319 ~~Ls~~e~~~e~l~~~L--R~~~Gid~~~~~~~fg~~~~--~~~~~~L~~~Gli~~~~--~~----~l~lT~~G~~~~d~  388 (395)
                      ..+|..+...   +.-|  .-..|+...++.+..+.+-.  ....+.|++.|||.+..  +|    .+.+|++|+-+.+.
T Consensus        29 ~~Ls~~q~~v---L~~l~~~~~~~~~~~~ia~~l~~~~~~vs~~v~~L~~~glV~r~~~~~D~R~v~i~LT~~G~~~~~~  105 (125)
T d1p4xa2          29 LTLSFVEFTI---LAIITSQNKNIVLLKDLIETIHHKYPQTVRALNNLKKQGYLIKERSTEDERKILIHMDDAQQDHAEQ  105 (125)
T ss_dssp             CSSCHHHHHH---HHHHHTTTTCCEEHHHHHHHSSSCHHHHHHHHHHHHHHTSSEEEECSSSTTCEEEECCHHHHHHHHH
T ss_pred             CCCCHHHHHH---HHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHHHHHHHH
T ss_conf             6999999999---9999980378836999999978984249999999980057765421788875788789999999999


Q ss_pred             HHHHH
Q ss_conf             99986
Q gi|254780628|r  389 VIANL  393 (395)
Q Consensus       389 I~~~l  393 (395)
                      +..++
T Consensus       106 l~~~~  110 (125)
T d1p4xa2         106 LLAQV  110 (125)
T ss_dssp             HHHHH
T ss_pred             HHHHH
T ss_conf             99999


No 38 
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]}
Probab=79.11  E-value=0.83  Score=22.48  Aligned_cols=55  Identities=15%  Similarity=0.030  Sum_probs=36.2

Q ss_pred             CHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             0023477663034541143234332013455422443134789999863024443332100
Q gi|254780628|r  117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIY  177 (395)
Q Consensus       117 ~~~~~l~~l~~~Gv~RiS~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli~  177 (395)
                      ...+.++.||++|||-|.+.|  ..+..    +-..+.+++.+.++.+++.+..|-+||-|
T Consensus        28 ~~~d~~~~lk~~G~n~VRlrv--W~~p~----~g~~~~~~~~~~~~~a~~~Gm~vll~~hy   82 (334)
T d1foba_          28 QTQALETILADAGINSIRQRV--WVNPS----DGSYDLDYNLELAKRVKAAGMSLYLDLHL   82 (334)
T ss_dssp             CBCCHHHHHHHHTCCEEEEEE--CSCCT----TCTTCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCCHHHHHHHCCCCEEEEEE--EECCC----CCCCCHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             804099999981999798644--02799----88676899999999999789979998257


No 39 
>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]}
Probab=78.29  E-value=0.91  Score=22.20  Aligned_cols=127  Identities=10%  Similarity=-0.012  Sum_probs=65.7

Q ss_pred             CCCHHHHHHHHHHCCCCCEE--EECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC------
Q ss_conf             41002347766303454114--3234332013455422443134789999863024443332100025854322------
Q gi|254780628|r  115 SSVEVNNFQGYRKAGVNRIS--LGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQ------  186 (395)
Q Consensus       115 ~~~~~~~l~~l~~~Gv~RiS--~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli~GlPgqt~e~------  186 (395)
                      ..++++.++.|++.|+|-|-  ++-+-+.+..-...-..-..+.+.++++.+++.+..|-||+- +.||.....      
T Consensus        19 ~~~~e~d~~~l~~~G~n~vRlpv~~~~~~~~~~~~~~~~~~l~~ld~~v~~~~~~gi~vildlH-~~pg~~~~~~~~~~~   97 (325)
T d1vjza_          19 GNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGIHICISLH-RAPGYSVNKEVEEKT   97 (325)
T ss_dssp             CCCCHHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHTCEEEEEEE-EETTEESCTTSCCSS
T ss_pred             CCCCHHHHHHHHHCCCCEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEC-CCCCCCCCCCCCCCC
T ss_conf             7787999999998499879936549992278887764878999999999999975995798521-365334676665564


Q ss_pred             -----------CCCCHHHHHH-C--CCCCEEEEEEEEECCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             -----------1112788753-1--80012346468825960001454498021103567889998655788709624
Q gi|254780628|r  187 -----------WEMELQRALS-Y--AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA  250 (395)
Q Consensus       187 -----------~~~~l~~~~~-l--~p~~is~Y~l~i~~~t~l~~~~~~~~~~~p~~~~~~~~~~~a~e~L~~~GY~~  250 (395)
                                 +....+.+.+ +  .++.|..|.+.-||.....        ..+..+...+++..+.+..++.+-.+
T Consensus        98 ~~~~~~~~~~~~~~~w~~~a~~~~~~~~~i~~~el~NEP~~~~~--------~~~~~~~~~~~~~~~~~~ir~~~p~~  167 (325)
T d1vjza_          98 NLWKDETAQEAFIHHWSFIARRYKGISSTHLSFNLINEPPFPDP--------QIMSVEDHNSLIKRTITEIRKIDPER  167 (325)
T ss_dssp             CTTTCHHHHHHHHHHHHHHHHHHTTSCTTTEEEECSSCCCCCBT--------TTBCHHHHHHHHHHHHHHHHHHCTTC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC--------CCCHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             43465666999999999999874226505886303345787766--------55213443047999999875038984


No 40 
>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]}
Probab=77.83  E-value=0.67  Score=23.08  Aligned_cols=44  Identities=14%  Similarity=0.240  Sum_probs=21.1

Q ss_pred             CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECC
Q ss_conf             78999999999766404764443321133210410023477663034541143234
Q gi|254780628|r   83 LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQ  138 (395)
Q Consensus        83 ~l~~~~l~~ll~~i~~~~~~~~~~e~t~E~~P~~~~~~~l~~l~~~Gv~RiS~GvQ  138 (395)
                      +.++++..+|++...    +...+  ...+     +.+.|+.++..|+. |.+||-
T Consensus        12 lps~~~Vv~lLk~~~----i~~IR--lY~~-----d~~vL~A~~~~gi~-v~lGv~   55 (306)
T d1aq0a_          12 LPAASTVVSMFKSNG----IKSMR--LYAP-----NQAALQAVGGTGIN-VVVGAP   55 (306)
T ss_dssp             CCCHHHHHHHHHHHT----CCEEE--ESSC-----CHHHHHHHTTSCCE-EEEEEC
T ss_pred             CCCHHHHHHHHHHCC----CCEEE--EECC-----CHHHHHHHHHCCCE-EEEECC
T ss_conf             979999999999679----89899--7589-----97999998853997-999615


No 41 
>d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]}
Probab=77.78  E-value=1.4  Score=20.96  Aligned_cols=78  Identities=15%  Similarity=0.228  Sum_probs=50.3

Q ss_pred             CCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCC-CCHHHHHHHHHHHCCCC--CCCCCCCCCCC---CCCCCC
Q ss_conf             1041002347766303454114323433201345542244-31347899998630244--43332100025---854322
Q gi|254780628|r  113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNH-NASEAIAAIHLARNIFP--RMSFDLIYALP---KQTMTQ  186 (395)
Q Consensus       113 ~P~~~~~~~l~~l~~~Gv~RiS~GvQs~~~~~l~~~~R~~-~~~~~~~~~~~~~~~~~--~v~iDli~GlP---gqt~e~  186 (395)
                      -|.+-+.+.|..|.+.|+|-+.+..             .| +.++..+.++.+|+.-.  ..++.++..++   .-|.. 
T Consensus        28 GPas~~~~~l~~li~aGvdv~RiN~-------------SHg~~e~~~~~i~~iR~~~~~~g~~v~i~~d~~gp~~~t~k-   93 (258)
T d1pkla2          28 GPSTQSVEALKGLIQSGMSVARMNF-------------SHGSHEYHQTTINNVRQAAAELGVNIAIALDTKGPPAVSAK-   93 (258)
T ss_dssp             CGGGCSHHHHHHHHHHTEEEEEEET-------------TSSCHHHHHHHHHHHHHHHHHTTCCCEEEEECCCCCSSCHH-
T ss_pred             CCCCCCHHHHHHHHHCCCCEEEEEC-------------CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-
T ss_conf             8886999999999985998899979-------------97999999999999999999839981411022321122132-


Q ss_pred             CCCCHHHHHHCCCCCEEE
Q ss_conf             111278875318001234
Q gi|254780628|r  187 WEMELQRALSYAVDHLSL  204 (395)
Q Consensus       187 ~~~~l~~~~~l~p~~is~  204 (395)
                      ...|++.+++.++|.|.+
T Consensus        94 d~~di~~a~~~~vD~ial  111 (258)
T d1pkla2          94 DRVDLQFGVEQGVDMIFA  111 (258)
T ss_dssp             HHHHHHHHHHHTCSEEEE
T ss_pred             HHHHHHHHHHCCCCEEEE
T ss_conf             899999887549985787


No 42 
>d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]}
Probab=76.70  E-value=0.86  Score=22.35  Aligned_cols=63  Identities=16%  Similarity=0.057  Sum_probs=43.0

Q ss_pred             HHHHHHHHHCCCCCEEE-ECCCCCC---------------------HHHHHHHC-CCCCHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             23477663034541143-2343320---------------------13455422-4431347899998630244433321
Q gi|254780628|r  119 VNNFQGYRKAGVNRISL-GVQSLEE---------------------QSLRFLGR-NHNASEAIAAIHLARNIFPRMSFDL  175 (395)
Q Consensus       119 ~~~l~~l~~~Gv~RiS~-GvQs~~~---------------------~~l~~~~R-~~~~~~~~~~~~~~~~~~~~v~iDl  175 (395)
                      .++|..|+++|||-|.| .|..+.+                     ........ --+.+++.+.++.+++.+..|-+|+
T Consensus       123 ~~kLdYLk~LGvtaI~L~Pi~~~~~~~~~~~~~~GY~~~dy~~~dp~~~~~~~~~~Gt~~dfk~lV~~~H~~GI~VIlDv  202 (572)
T d1gjwa2         123 MLLLPFVKSLGADAIYLLPVSRMSDLFKKGDAPSPYSVKNPMELDERYHDPLLEPFKVDEEFKAFVEACHILGIRVILDF  202 (572)
T ss_dssp             HHTHHHHHHHTCCEEEECCCEEECCSSCSSSSCCTTSEEEEEEECGGGSCGGGTTSCHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
T ss_conf             98668999869988995986507655677878999886678777865455666678899999999999986285898986


Q ss_pred             CCCCCC
Q ss_conf             000258
Q gi|254780628|r  176 IYALPK  181 (395)
Q Consensus       176 i~GlPg  181 (395)
                      .++--+
T Consensus       203 V~NHts  208 (572)
T d1gjwa2         203 IPRTAA  208 (572)
T ss_dssp             CTTEEE
T ss_pred             EECCCC
T ss_conf             303456


No 43 
>d2fbha1 a.4.5.28 (A:8-144) Transcriptional regulator PA3341 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=76.43  E-value=2.2  Score=19.71  Aligned_cols=61  Identities=15%  Similarity=0.223  Sum_probs=45.3

Q ss_pred             HHHHH-HCCCCCHHHHHHHHCCCH--HHHHHHHHHHCCCEEEEEC--C----EEEECHHHHHHHHHHHHH
Q ss_conf             99656-237998889998838996--4999999998799498559--8----999956758989999998
Q gi|254780628|r  332 MMGLR-LREGISVKDWEMLAGRNL--DIECERNLQRQGFIERVQF--S----RLRCTQRGMTMLDSVIAN  392 (395)
Q Consensus       332 ~~~LR-~~~Gid~~~~~~~fg~~~--~~~~~~~L~~~Gli~~~~~--~----~l~lT~~G~~~~d~I~~~  392 (395)
                      +..|. ...|+..+++.+..+.+-  .....+.|++.|||.+..+  |    .+.+|++|.-+.+.+...
T Consensus        34 L~~l~~~~~~~t~~~la~~~~~~~~~vs~~v~~L~~~gli~r~~~~~D~R~~~i~lT~~G~~~~~~~~~~  103 (137)
T d2fbha1          34 LLHLARHRDSPTQRELAQSVGVEGPTLARLLDGLESQGLVRRLAVAEDRRAKHIVLTPKADVLIADIEAI  103 (137)
T ss_dssp             HHHHHHCSSCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECCBTTBCSCEEEECTTHHHHHHHHHHH
T ss_pred             HHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHH
T ss_conf             9999876999769999999897898999999999985772005777888811120689899999999999


No 44 
>d1z91a1 a.4.5.28 (A:8-144) Organic hydroperoxide resistance transcriptional regulator OhrR {Bacillus subtilis [TaxId: 1423]}
Probab=76.28  E-value=1.2  Score=21.46  Aligned_cols=67  Identities=16%  Similarity=0.171  Sum_probs=47.3

Q ss_pred             ECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHH--HHHHHHHHHCCCEEEEE---CC---EEEECHHHHHHHHHH
Q ss_conf             549999899999996562379988899988389964--99999999879949855---98---999956758989999
Q gi|254780628|r  320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQ---FS---RLRCTQRGMTMLDSV  389 (395)
Q Consensus       320 ~Ls~~e~~~e~l~~~LR~~~Gid~~~~~~~fg~~~~--~~~~~~L~~~Gli~~~~---~~---~l~lT~~G~~~~d~I  389 (395)
                      -+|..+.   .++..|....|++.+.+.+..+.+-.  ...++.|++.|||.+..   +.   .+.+|++|..+.+.+
T Consensus        30 gLt~~q~---~vL~~l~~~~~~t~~~La~~~~i~~~~vsr~i~~L~~~glv~r~~~~~D~R~~~i~lT~~G~~~~~~~  104 (137)
T d1z91a1          30 NITYPQY---LALLLLWEHETLTVKKMGEQLYLDSGTLTPMLKRMEQQGLITRKRSEEDERSVLISLTEDGALLKEKA  104 (137)
T ss_dssp             CCCHHHH---HHHHHHHHHSEEEHHHHHHTTTCCHHHHHHHHHHHHHHTSEECCBCSSCTTSBEEEECHHHHSGGGGT
T ss_pred             CCCHHHH---HHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHHHHHHHHH
T ss_conf             9699999---99999875899989999999796888897999999650054772168988857878898999999999


No 45 
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]}
Probab=75.84  E-value=0.83  Score=22.46  Aligned_cols=13  Identities=31%  Similarity=0.496  Sum_probs=7.3

Q ss_pred             CCCCCEEEE-EECC
Q ss_conf             898854999-9406
Q gi|254780628|r   14 QGSNSLGVY-VHWP   26 (395)
Q Consensus        14 ~~~~~l~lY-ihiP   26 (395)
                      ...+|+++| |||+
T Consensus        12 ~~~~~~~iYe~~~~   25 (396)
T d1m7xa3          12 QFDAPISIYEVHLG   25 (396)
T ss_dssp             STTSCCEEEEECTT
T ss_pred             CCCCCCEEEEECCC
T ss_conf             88998679977257


No 46 
>d1p4xa1 a.4.5.28 (A:1-125) Staphylococcal accessory regulator A homolog, SarS {Staphylococcus aureus [TaxId: 1280]}
Probab=75.76  E-value=2.3  Score=19.59  Aligned_cols=72  Identities=8%  Similarity=0.057  Sum_probs=50.0

Q ss_pred             EECCHHHHHHHHHHHHHHHCC--CCCHHHHHHHHCCCH--HHHHHHHHHHCCCEEEEECC------EEEECHHHHHHHHH
Q ss_conf             454999989999999656237--998889998838996--49999999987994985598------99995675898999
Q gi|254780628|r  319 EFLSSEQQADEFLMMGLRLRE--GISVKDWEMLAGRNL--DIECERNLQRQGFIERVQFS------RLRCTQRGMTMLDS  388 (395)
Q Consensus       319 ~~Ls~~e~~~e~l~~~LR~~~--Gid~~~~~~~fg~~~--~~~~~~~L~~~Gli~~~~~~------~l~lT~~G~~~~d~  388 (395)
                      .-||..+..   ++..|....  ++...++.+..+.+-  ....++.|++.|||.+..+.      .+.+|++|+-....
T Consensus        30 ~~Lt~~q~~---iL~~l~~~~~~~~t~~eia~~~~~~~~~vs~~l~~L~~~g~v~r~~~~~D~R~~~i~lT~~G~~~~~~  106 (125)
T d1p4xa1          30 VDMTIKEFI---LLTYLFHQQENTLPFKKIVSDLCYKQSDLVQHIKVLVKHSYISKVRSKIDERNTYISISEEQREKIAE  106 (125)
T ss_dssp             CSSCHHHHH---HHHHHHSCSCSEEEHHHHHHHSSSCGGGTHHHHHHHHHTTSCEEEECSSSTTSEEEECCHHHHHHHHH
T ss_pred             CCCCHHHHH---HHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCCEEEEEECHHHHHHHHH
T ss_conf             499889999---99999984369867999999968882439999999998898102123589873798889999999999


Q ss_pred             HHHHH
Q ss_conf             99986
Q gi|254780628|r  389 VIANL  393 (395)
Q Consensus       389 I~~~l  393 (395)
                      +...+
T Consensus       107 ~~~~~  111 (125)
T d1p4xa1         107 RVTLF  111 (125)
T ss_dssp             HHHHH
T ss_pred             HHHHH
T ss_conf             99999


No 47 
>d1tw3a1 a.4.5.29 (A:14-98) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}
Probab=75.22  E-value=2.3  Score=19.50  Aligned_cols=50  Identities=18%  Similarity=0.169  Sum_probs=40.2

Q ss_pred             CCCCCHHHHHHHHCCCHH--HHHHHHHHHCCCEEEEECCEEEECHHHHHHHH
Q ss_conf             379988899988389964--99999999879949855989999567589899
Q gi|254780628|r  338 REGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFSRLRCTQRGMTMLD  387 (395)
Q Consensus       338 ~~Gid~~~~~~~fg~~~~--~~~~~~L~~~Gli~~~~~~~l~lT~~G~~~~d  387 (395)
                      ..+++.+++.++.|.+..  ..+++.+...|+++..+++.+.+|+.|..+.+
T Consensus        32 ~gp~s~~eLA~~~g~~~~~l~rlLr~l~a~gl~~e~~~~~y~lt~~s~~L~~   83 (85)
T d1tw3a1          32 AGARTVKALAARTDTRPEALLRLIRHLVAIGLLEEDAPGEFVPTEVGELLAD   83 (85)
T ss_dssp             TTCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEETTEEEECTTGGGGST
T ss_pred             CCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCEEECCHHHHHHHC
T ss_conf             4999999999884929269999999998779757469993856998998632


No 48 
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]}
Probab=75.10  E-value=2.3  Score=19.48  Aligned_cols=124  Identities=10%  Similarity=-0.047  Sum_probs=74.3

Q ss_pred             CCCCHHHHHHHHH-HCCCCC--EEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             0410023477663-034541--1432343320134554224431347899998630244433321000258543221112
Q gi|254780628|r  114 PSSVEVNNFQGYR-KAGVNR--ISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEME  190 (395)
Q Consensus       114 P~~~~~~~l~~l~-~~Gv~R--iS~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli~GlPgqt~e~~~~~  190 (395)
                      +...+++.+..|+ +.|+|-  +-|..+.+++....... ....+.+.++++.+++.+..|-+|+-..-+..+.+.+..-
T Consensus        36 ~~~~~~~~~~~l~~~~g~N~VR~~~~~~~~~~~~~~~~~-~~~l~~ld~~v~~a~~~gi~vild~h~~~~~~~~~~~~~~  114 (293)
T d1tvna1          36 EKFYTAETVAKAKTEFNATLIRAAIGHGTSTGGSLNFDW-EGNMSRLDTVVNAAIAEDMYVIIDFHSHEAHTDQATAVRF  114 (293)
T ss_dssp             GGGCSHHHHHHHHHHHCCSEEEEEEECCTTSTTSTTTCH-HHHHHHHHHHHHHHHHTTCEEEEEEECSCGGGCHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHH
T ss_conf             763279999999985798089980624445655655575-7779999999999997698898457667876559999999


Q ss_pred             HHHHHHC--CCCCEEEEEEEEECCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             7887531--800123464688259600014544980211035678899986557887096242
Q gi|254780628|r  191 LQRALSY--AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY  251 (395)
Q Consensus       191 l~~~~~l--~p~~is~Y~l~i~~~t~l~~~~~~~~~~~p~~~~~~~~~~~a~e~L~~~GY~~Y  251 (395)
                      .+.+.+-  +.++|. |.|.-||...-            ......++++.+.+..++.+..+.
T Consensus       115 w~~~a~r~k~~~~V~-~el~NEP~~~~------------~~~~~~~~~~~~~~~Ir~~dp~~~  164 (293)
T d1tvna1         115 FEDVATKYGQYDNVI-YEIYNEPLQIS------------WVNDIKPYAETVIDKIRAIDPDNL  164 (293)
T ss_dssp             HHHHHHHHTTCTTEE-EECCSCCCSCC------------TTTTHHHHHHHHHHHHHTTCCSCE
T ss_pred             HHHHHHHHCCCCEEE-EEEECCCCCCC------------CHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf             999999838997189-99862567887------------378899999999999851399818


No 49 
>d1i60a_ c.1.15.4 (A:) Hypothetical protein IolI {Bacillus subtilis [TaxId: 1423]}
Probab=74.51  E-value=2.4  Score=19.38  Aligned_cols=11  Identities=18%  Similarity=0.419  Sum_probs=3.9

Q ss_pred             HHHHHCCCCCE
Q ss_conf             76630345411
Q gi|254780628|r  123 QGYRKAGVNRI  133 (395)
Q Consensus       123 ~~l~~~Gv~Ri  133 (395)
                      +..+..|+.+|
T Consensus        91 ~~a~~lG~~~i  101 (278)
T d1i60a_          91 ETCKTLGVKYV  101 (278)
T ss_dssp             HHHHHHTCCEE
T ss_pred             HHHHHCCCCCC
T ss_conf             99997499845


No 50 
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]}
Probab=73.67  E-value=2.5  Score=19.25  Aligned_cols=123  Identities=11%  Similarity=-0.014  Sum_probs=67.2

Q ss_pred             CCCCCHHHHHHHHH-HCCCC--CEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             10410023477663-03454--1143234332013455422443134789999863024443332100025854322111
Q gi|254780628|r  113 NPSSVEVNNFQGYR-KAGVN--RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEM  189 (395)
Q Consensus       113 ~P~~~~~~~l~~l~-~~Gv~--RiS~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli~GlPgqt~e~~~~  189 (395)
                      .+...+++.+..|+ +.|+|  |+.++.+.......   ......+.+.++++.+.+.+.-|-+|+.---+....+.+..
T Consensus        35 ~~~~~~~~~~~~l~~~~G~N~vR~~~~~~~~~~~~~---~~~~~~~~ld~vv~~a~~~Giyvild~h~~~~~~~~~~~~~  111 (291)
T d1egza_          35 GEKFYTADTVASLKKDWKSSIVRAAMGVQESGGYLQ---DPAGNKAKVERVVDAAIANDMYAIIGWHSHSAENNRSEAIR  111 (291)
T ss_dssp             GGGGCSHHHHHHHHHTTCCCEEEEEEECSSTTSTTT---CHHHHHHHHHHHHHHHHHTTCEEEEEEECSCGGGGHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCC---CCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHH
T ss_conf             766559999999999659988998353345588345---90888999999999999789867652022787632899999


Q ss_pred             CHHHHHH-C-CCCCEEEEEEEEECCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             2788753-1-800123464688259600014544980211035678899986557887096242
Q gi|254780628|r  190 ELQRALS-Y-AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAY  251 (395)
Q Consensus       190 ~l~~~~~-l-~p~~is~Y~l~i~~~t~l~~~~~~~~~~~p~~~~~~~~~~~a~e~L~~~GY~~Y  251 (395)
                      -.+.+.+ + +.++| +|.+.=||....            ..+.....++.+.+..++.+-.+.
T Consensus       112 ~w~~la~ryk~~p~v-~~el~NEP~~~~------------~~~~~~~~~~~~~~~IR~~d~~~~  162 (291)
T d1egza_         112 FFQEMARKYGNKPNV-IYEIYNEPLQVS------------WSNTIKPYAEAVISAIRAIDPDNL  162 (291)
T ss_dssp             HHHHHHHHHTTSTTE-EEECCSCCCSCC------------TTTTHHHHHHHHHHHHHHHCSSSC
T ss_pred             HHHHHHHHHCCCCCE-EEEECCCCCCCC------------CHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf             999999981899664-544204767775------------625578999999999984299967


No 51 
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]}
Probab=73.49  E-value=0.91  Score=22.20  Aligned_cols=18  Identities=0%  Similarity=0.108  Sum_probs=12.2

Q ss_pred             CCCCHHHHHHHHHHHHHC
Q ss_conf             878999999999766404
Q gi|254780628|r   82 SLIEPQNIALILDGIAKN   99 (395)
Q Consensus        82 s~l~~~~l~~ll~~i~~~   99 (395)
                      .+=+.+++++|++.+++.
T Consensus        65 ~~Gt~~d~~~lv~~~h~~   82 (391)
T d1lwha2          65 EYGSEREFKEMIEAFHDS   82 (391)
T ss_dssp             GGCCHHHHHHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHC
T ss_conf             239999999999999735


No 52 
>d2fyma1 c.1.11.1 (A:140-431) Enolase {Escherichia coli [TaxId: 562]}
Probab=73.42  E-value=2.6  Score=19.21  Aligned_cols=37  Identities=11%  Similarity=0.146  Sum_probs=18.6

Q ss_pred             CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             244313478999986302444333210002585432211
Q gi|254780628|r  150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE  188 (395)
Q Consensus       150 R~~~~~~~~~~~~~~~~~~~~v~iDli~GlPgqt~e~~~  188 (395)
                      |.-++++..+.+..+-+-++-++|  .=++..+..++|.
T Consensus       126 ~~~t~~eli~~y~~l~~~yPIisI--EDP~~edD~~gw~  162 (292)
T d2fyma1         126 KAFTSEEFTHFLEELTKQYPIVSI--EDGLDESDWDGFA  162 (292)
T ss_dssp             EEECHHHHHHHHHHHHHHSCEEEE--ESCSCTTCHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHCCCEEEE--ECCCCCCCHHHHH
T ss_conf             012689999999999726756898--4776643389999


No 53 
>d1w6ta1 c.1.11.1 (A:138-433) Enolase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=72.61  E-value=2.5  Score=19.30  Aligned_cols=22  Identities=27%  Similarity=0.487  Sum_probs=9.0

Q ss_pred             CCCCCCCCCHHH-HHHHHHHHHH
Q ss_conf             288888789999-9999976640
Q gi|254780628|r   77 GGGTPSLIEPQN-IALILDGIAK   98 (395)
Q Consensus        77 GGGTPs~l~~~~-l~~ll~~i~~   98 (395)
                      ||=.|.+-+.++ |+-|.++|.+
T Consensus        69 GGfaP~~~~~e~aL~ll~eAI~~   91 (296)
T d1w6ta1          69 GGFAPRFEGTEDGVETILAAIEA   91 (296)
T ss_dssp             SCBCCCCSSHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             44345675758889999999998


No 54 
>d1twda_ c.1.30.1 (A:) Copper homeostasis protein CutC {Shigella flexneri [TaxId: 623]}
Probab=72.43  E-value=2.7  Score=19.06  Aligned_cols=111  Identities=15%  Similarity=0.216  Sum_probs=62.3

Q ss_pred             HHCCCEEE---EEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC---------C--HHHHHHHHHHCCC
Q ss_conf             61895058---99962888887899999999976640476444332113321041---------0--0234776630345
Q gi|254780628|r   65 LTGPRSIS---SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSS---------V--EVNNFQGYRKAGV  130 (395)
Q Consensus        65 ~~~~~~~~---~iy~GGGTPs~l~~~~l~~ll~~i~~~~~~~~~~e~t~E~~P~~---------~--~~~~l~~l~~~Gv  130 (395)
                      ..+..+++   .+..||=|||.   ..++.+.+.+    .++    +-+=.+|..         +  =.+.+..+++.|+
T Consensus        18 ~~GAdRIELc~~l~~GGlTPS~---g~i~~~~~~~----~iP----v~vMIRPR~GdF~Ys~~E~~~M~~di~~~k~~G~   86 (247)
T d1twda_          18 QNGADRVELCAAPKEGGLTPSL---GVLKSVRQRV----TIP----VHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGF   86 (247)
T ss_dssp             HTTCSEEEECBCGGGTCBCCCH---HHHHHHHHHC----CSC----EEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHTTC
T ss_pred             HCCCCEEEECCCCCCCCCCCCH---HHHHHHHHHC----CCC----EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf             8499989984776669979999---9999999864----997----2799704899887898999999999999998599


Q ss_pred             CCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCC--CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCE
Q ss_conf             41143234332013455422443134789999863024--4433321000258543221112788753180012
Q gi|254780628|r  131 NRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIF--PRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL  202 (395)
Q Consensus       131 ~RiS~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~--~~v~iDli~GlPgqt~e~~~~~l~~~~~l~p~~i  202 (395)
                      +-|-||+-+-|-++        +.+...+.+..++..-  +.=.+|..        .++.+.++.+++++.++|
T Consensus        87 dGvV~G~L~~dg~i--------D~~~~~~L~~~a~~l~vTFHRAfD~~--------~d~~~al~~Li~lG~~rI  144 (247)
T d1twda_          87 PGLVTGVLDVDGNV--------DMPRMEKIMAAAGPLAVTFHRAFDMC--------ANPLYTLNNLAELGIARV  144 (247)
T ss_dssp             SEEEECCBCTTSSB--------CHHHHHHHHHHHTTSEEEECGGGGGC--------SCHHHHHHHHHHHTCCEE
T ss_pred             CEEEEEEECCCCCC--------CHHHHHHHHHHHCCCCEEEEHHHHHH--------CCHHHHHHHHHHCCCCEE
T ss_conf             86899788898881--------49999999999633672530024652--------899999999976697867


No 55 
>d2fbka1 a.4.5.28 (A:8-179) Transcriptional regulator DR1159 {Deinococcus radiodurans [TaxId: 1299]}
Probab=72.22  E-value=2.7  Score=19.03  Aligned_cols=69  Identities=22%  Similarity=0.275  Sum_probs=47.6

Q ss_pred             CCHHHHHHHHHHHHHHHC---CCCCHHHHHHHHCCCHH--HHHHHHHHHCCCEEEEEC--C----EEEECHHHHHHHHHH
Q ss_conf             499998999999965623---79988899988389964--999999998799498559--8----999956758989999
Q gi|254780628|r  321 LSSEQQADEFLMMGLRLR---EGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF--S----RLRCTQRGMTMLDSV  389 (395)
Q Consensus       321 Ls~~e~~~e~l~~~LR~~---~Gid~~~~~~~fg~~~~--~~~~~~L~~~Gli~~~~~--~----~l~lT~~G~~~~d~I  389 (395)
                      ||..+.   .++..|...   .|+...++.+..+.+-.  ...++.|+++|||++..+  |    .+.||++|+-+.+.+
T Consensus        60 Lt~~q~---~vL~~L~~~~~~~~lt~~eLa~~l~i~~~tvsr~l~~Le~~GlV~r~~~~~DrR~~~i~LT~~G~~l~~~~  136 (172)
T d2fbka1          60 LNAAGW---DLLLTLYRSAPPEGLRPTELSALAAISGPSTSNRIVRLLEKGLIERREDERDRRSASIRLTPQGRALVTHL  136 (172)
T ss_dssp             CCHHHH---HHHHHHHHHCCSSCBCHHHHHHHCSCCSGGGSSHHHHHHHHTSEECCC-------CCBEECHHHHHHHHHH
T ss_pred             CCHHHH---HHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHCCHHHHHHHHHH
T ss_conf             799999---99999985189999689999999786785799999999868984441355310467750489999999999


Q ss_pred             HHH
Q ss_conf             998
Q gi|254780628|r  390 IAN  392 (395)
Q Consensus       390 ~~~  392 (395)
                      ...
T Consensus       137 ~~~  139 (172)
T d2fbka1         137 LPA  139 (172)
T ss_dssp             HHH
T ss_pred             HHH
T ss_conf             999


No 56 
>d2f2ea1 a.4.5.69 (A:5-146) Hypothetical protein PA1607 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=71.59  E-value=2.8  Score=18.94  Aligned_cols=50  Identities=18%  Similarity=0.243  Sum_probs=35.9

Q ss_pred             CCHHHHHHHHCCCH--HHHHHHHHHHCCCEEEEECC-----EEEECHHHHHHHHHHH
Q ss_conf             98889998838996--49999999987994985598-----9999567589899999
Q gi|254780628|r  341 ISVKDWEMLAGRNL--DIECERNLQRQGFIERVQFS-----RLRCTQRGMTMLDSVI  390 (395)
Q Consensus       341 id~~~~~~~fg~~~--~~~~~~~L~~~Gli~~~~~~-----~l~lT~~G~~~~d~I~  390 (395)
                      ..++++++..|++-  ....+++|++.|+|++....     .+.||++|+.+..-+.
T Consensus        34 ~rf~el~~~lgis~~vLs~rL~~L~~~gLv~r~~~~~p~r~~Y~LT~~G~~L~pil~   90 (142)
T d2f2ea1          34 TRFGEFQKSLGLAKNILAARLRNLVEHGVMVAVPAESGSHQEYRLTDKGRALFPLLV   90 (142)
T ss_dssp             CSHHHHHHHHCCCHHHHHHHHHHHHHTTSEEEEECSSSSCEEEEECHHHHTTHHHHH
T ss_pred             CCHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEECCCCCCEEEEECCCCCCHHHHHHH
T ss_conf             779999977400388999999999971043554589997567843838412999999


No 57 
>d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]}
Probab=70.87  E-value=2.1  Score=19.83  Aligned_cols=119  Identities=13%  Similarity=0.042  Sum_probs=62.2

Q ss_pred             CCHHHHHHHHHHCCCCCEEEEC--CCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC---------
Q ss_conf             1002347766303454114323--43320134554224431347899998630244433321000258543---------
Q gi|254780628|r  116 SVEVNNFQGYRKAGVNRISLGV--QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM---------  184 (395)
Q Consensus       116 ~~~~~~l~~l~~~Gv~RiS~Gv--Qs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli~GlPgqt~---------  184 (395)
                      -+|++.++.|++.|+|-|.|.|  ..+.+.--.... .-..+.+.++++.+++.+..|-+||- +.||...         
T Consensus        68 ~it~~D~~~i~~~G~N~VRiPv~~~~~~~~~~~~~~-~~~~~~ld~~i~~a~~~gl~VilDlH-~~pg~~~~~~~~g~~~  145 (394)
T d2pb1a1          68 WITEQDFKQISNLGLNFVRIPIGYWAFQLLDNDPYV-QGQVQYLEKALGWARKNNIRVWIDLH-GAPGSQNGFDNSGLRD  145 (394)
T ss_dssp             SSCHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCC-CCHHHHHHHHHHHHHHTTCEEEEEEE-ECTTCSSCCGGGSSTT
T ss_pred             CCCHHHHHHHHHCCCCEEEEEECHHHHCCCCCCCCC-HHHHHHHHHHHHHHHHCCCEEEEEEE-CCCCCCCCCCCCCCCC
T ss_conf             488999999997799889998027884488877552-36899999999999979918999851-1588666767767667


Q ss_pred             -------CC---CCCCHHHHHH-CC--C--CCEEEEEEEEECCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf             -------22---1112788753-18--0--012346468825960001454498021103567889998655788709
Q gi|254780628|r  185 -------TQ---WEMELQRALS-YA--V--DHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG  247 (395)
Q Consensus       185 -------e~---~~~~l~~~~~-l~--p--~~is~Y~l~i~~~t~l~~~~~~~~~~~p~~~~~~~~~~~a~e~L~~~G  247 (395)
                             +.   +..-++.+.+ .+  |  +.|..|.|.-||....           ...+...+.|..+.+..++.+
T Consensus       146 ~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~v~g~el~NEP~~~~-----------~~~~~~~~~~~~~~~~IR~~~  212 (394)
T d2pb1a1         146 SYNFQNGDNTQVTLNVLNTIFKKYGGNEYSDVVIGIELLNEPLGPV-----------LNMDKLKQFFLDGYNSLRQTG  212 (394)
T ss_dssp             CCCTTSTTHHHHHHHHHHHHHHHHSSGGGTTTEEEEESCSCCCGGG-----------SCHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC-----------CCHHHHHHHHHHHHHHHHHHC
T ss_conf             6443667799999999999999971588777068874135678665-----------437899999999999999738


No 58 
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]}
Probab=70.30  E-value=1.2  Score=21.43  Aligned_cols=14  Identities=7%  Similarity=0.107  Sum_probs=4.9

Q ss_pred             HHHHHHHHHHHCCC
Q ss_conf             99986557887096
Q gi|254780628|r  235 LYNLTQSITSAHGL  248 (395)
Q Consensus       235 ~~~~a~e~L~~~GY  248 (395)
                      |++....-+++.||
T Consensus       209 ~~d~~~~A~~~~~~  222 (306)
T d1ghsa_         209 MVDAVYAALEKAGA  222 (306)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHCCC
T ss_conf             89999999996089


No 59 
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]}
Probab=70.05  E-value=3  Score=18.81  Aligned_cols=21  Identities=10%  Similarity=0.067  Sum_probs=10.9

Q ss_pred             HHCCCCCHHHHHHHHCCCHHH
Q ss_conf             623799888999883899649
Q gi|254780628|r  336 RLREGISVKDWEMLAGRNLDI  356 (395)
Q Consensus       336 R~~~Gid~~~~~~~fg~~~~~  356 (395)
                      .+..|++.--+=..|+.++.+
T Consensus       314 lt~pGiP~IyyGD~~~~~~~d  334 (347)
T d1ht6a2         314 LTHPGIPCIFYDHFFNWGFKD  334 (347)
T ss_dssp             HHSSSEEEEEHHHHHTSSCHH
T ss_pred             HHCCCCEEEEECCCCCCCCHH
T ss_conf             975990089727876888569


No 60 
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]}
Probab=69.96  E-value=1.5  Score=20.70  Aligned_cols=29  Identities=10%  Similarity=-0.069  Sum_probs=20.0

Q ss_pred             CCHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             31347899998630244433321000258
Q gi|254780628|r  153 NASEAIAAIHLARNIFPRMSFDLIYALPK  181 (395)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~v~iDli~GlPg  181 (395)
                      +.+++.+.++.+++.+..|-+|++++--+
T Consensus        79 t~~efk~lV~~~H~~GI~VilDvV~NHt~  107 (390)
T d1ud2a2          79 TKAQLERAIGSLKSNDINVYGDVVMNHKM  107 (390)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred             CHHHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf             99999999999985588138987145546


No 61 
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=69.36  E-value=1.3  Score=21.28  Aligned_cols=47  Identities=17%  Similarity=0.239  Sum_probs=27.8

Q ss_pred             HHHHHHHH-HHCC-CCCCCCCCCCCCCCCCCCCCCCCHHHHH-HCCCCCE
Q ss_conf             47899998-6302-4443332100025854322111278875-3180012
Q gi|254780628|r  156 EAIAAIHL-ARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL-SYAVDHL  202 (395)
Q Consensus       156 ~~~~~~~~-~~~~-~~~v~iDli~GlPgqt~e~~~~~l~~~~-~l~p~~i  202 (395)
                      .+.+.+.. +.+. ..-+-+|.+..++......+...+...+ +.+|+.+
T Consensus       145 ~~~~~~~~Wl~~~GVDGfR~D~~~~l~~~~~~~~~~~~~~~~~~~~p~~~  194 (420)
T d2bhua3         145 YVTGNARMWLRDYHFDGLRLDATPYMTDDSETHILTELAQEIHELGGTHL  194 (420)
T ss_dssp             HHHHHHHHHHHHHCCSEEEETTGGGCCCCSSSCHHHHHHHHHHTTCSCCE
T ss_pred             HHHHHHHEEEECCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCE
T ss_conf             99887640320146537887333320212231007999888876468742


No 62 
>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]}
Probab=69.04  E-value=2.2  Score=19.66  Aligned_cols=55  Identities=20%  Similarity=0.074  Sum_probs=39.2

Q ss_pred             CHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             0023477663034541143234332013455422443134789999863024443332100
Q gi|254780628|r  117 VEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIY  177 (395)
Q Consensus       117 ~~~~~l~~l~~~Gv~RiS~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli~  177 (395)
                      ..++.++.||++|+|-|.++| =.++.     .-....+++.++++.+++.+..|-+||-+
T Consensus        28 ~~~~~~~~lk~~G~n~VRi~v-W~~p~-----~g~~~~~~~~~~v~~a~~~gl~vil~~h~   82 (332)
T d1hjsa_          28 NAQPLENILAANGVNTVRQRV-WVNPA-----DGNYNLDYNIAIAKRAKAAGLGVYIDFHY   82 (332)
T ss_dssp             CBCCHHHHHHHTTCCEEEEEE-CSSCT-----TCTTSHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCCHHHHHHHCCCCEEEEEE-EECCC-----CCCCCHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             803399999974999799613-00699-----88567899999999999889979998367


No 63 
>d1dpua_ a.4.5.16 (A:) C-terminal domain of RPA32 {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.86  E-value=3.2  Score=18.56  Aligned_cols=61  Identities=18%  Similarity=0.178  Sum_probs=44.5

Q ss_pred             CCHHHHHHHHHHHHHHHCCCCCHHHHHHHH-CCCHHH--HHHHHHHHCCCEE-EEECCEEEECHH
Q ss_conf             499998999999965623799888999883-899649--9999999879949-855989999567
Q gi|254780628|r  321 LSSEQQADEFLMMGLRLREGISVKDWEMLA-GRNLDI--ECERNLQRQGFIE-RVQFSRLRCTQR  381 (395)
Q Consensus       321 Ls~~e~~~e~l~~~LR~~~Gid~~~~~~~f-g~~~~~--~~~~~L~~~Gli~-~~~~~~l~lT~~  381 (395)
                      ||+.++..-.++.+....+|+..+++.+++ |.+...  ...+.|..+|.|- .+|+++|+-|+.
T Consensus         4 Ls~~q~~V~~~i~s~~~~eGi~~~el~~~l~~~~~~~i~~aid~L~~eG~IYsTiDddHfkstd~   68 (69)
T d1dpua_           4 LTVAQNQVLNLIKACPRPEGLNFQDLKNQLKHMSVSSIKQAVDFLSNEGHIYSTVDDDHFKSTDA   68 (69)
T ss_dssp             SCHHHHHHHHHHHHCCCTTTEEHHHHHHHSTTSCHHHHHHHHHHHHHTTSEEECSSTTEEEESSC
T ss_pred             CCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCEECCCCCCHHCCCCC
T ss_conf             98999999999983888568389999988169999999999999983785551036541104578


No 64 
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]}
Probab=68.35  E-value=1.5  Score=20.73  Aligned_cols=116  Identities=9%  Similarity=0.054  Sum_probs=59.0

Q ss_pred             CHHHHHHHHHHCCCCCEEEEC--CCCCCHHH-HHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC---------
Q ss_conf             002347766303454114323--43320134-554224431347899998630244433321000258543---------
Q gi|254780628|r  117 VEVNNFQGYRKAGVNRISLGV--QSLEEQSL-RFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM---------  184 (395)
Q Consensus       117 ~~~~~l~~l~~~Gv~RiS~Gv--Qs~~~~~l-~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli~GlPgqt~---------  184 (395)
                      ++++.++.+++.|+|-|-+.|  ..+.+.-- ...+ ....+.+.++++.+++.+..|-+|+- +.||...         
T Consensus        29 ~te~d~~~i~~~G~n~vRlpi~~~~~~~~~~~~~~~-~~~~~~ld~~v~~a~~~gi~vild~H-~~p~~~~~~~~~~~~~  106 (340)
T d1ceoa_          29 ITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYK-EDGLSYIDRCLEWCKKYNLGLVLDMH-HAPGYRFQDFKTSTLF  106 (340)
T ss_dssp             SCHHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBC-HHHHHHHHHHHHHHHHTTCEEEEEEE-ECCC--------CCTT
T ss_pred             CCHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCC-HHHHHHHHHHHHHHHHCCCEEEEEEC-CCCCCCCCCCCCCCCC
T ss_conf             509999999985999899404799921688887468-89999999999999986997999835-7875456655665544


Q ss_pred             ------CCCCCCHHHHHH-CC-CCCEEEEEEEEECCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf             ------221112788753-18-0012346468825960001454498021103567889998655788709
Q gi|254780628|r  185 ------TQWEMELQRALS-YA-VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHG  247 (395)
Q Consensus       185 ------e~~~~~l~~~~~-l~-p~~is~Y~l~i~~~t~l~~~~~~~~~~~p~~~~~~~~~~~a~e~L~~~G  247 (395)
                            +.+..-.+.+.+ ++ -+.+-.|.+.-||..             ++.+...++++.+.+..++.+
T Consensus       107 ~~~~~~~~~~~~~~~la~ry~~~p~v~~~el~NEP~~-------------~~~~~~~~~~~~~~~aIR~~d  164 (340)
T d1ceoa_         107 EDPNQQKRFVDIWRFLAKRYINEREHIAFELLNQVVE-------------PDSTRWNKLMLECIKAIREID  164 (340)
T ss_dssp             TCHHHHHHHHHHHHHHHHHTTTCCSSEEEECCSCCCC-------------SSSHHHHHHHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCC-------------CCHHHHHHHHHHHHHHHHHCC
T ss_conf             5578999999999999874479885798863244499-------------987999999999999997327


No 65 
>d2hzta1 a.4.5.69 (A:4-98) Putative transcriptional regulator YtcD {Bacillus subtilis [TaxId: 1423]}
Probab=67.83  E-value=3.4  Score=18.42  Aligned_cols=51  Identities=14%  Similarity=0.193  Sum_probs=35.8

Q ss_pred             CCCHHHHHHHH-CCCH--HHHHHHHHHHCCCEEEEECC------EEEECHHHHHHHHHHH
Q ss_conf             99888999883-8996--49999999987994985598------9999567589899999
Q gi|254780628|r  340 GISVKDWEMLA-GRNL--DIECERNLQRQGFIERVQFS------RLRCTQRGMTMLDSVI  390 (395)
Q Consensus       340 Gid~~~~~~~f-g~~~--~~~~~~~L~~~Gli~~~~~~------~l~lT~~G~~~~d~I~  390 (395)
                      ...++++++.- |++-  -...+++|++.|+|++....      .+.||++|+.+..-+.
T Consensus        24 ~~rF~el~~~l~gis~~~Ls~rLk~Le~~glv~r~~~~~~p~~veY~LT~~G~~L~pil~   83 (95)
T d2hzta1          24 KKRTSELKRLMPNITQKMLTQQLRELEADGVINRIVYNQVPPKVEYELSEYGRSLEGILD   83 (95)
T ss_dssp             CBCHHHHHHHCTTSCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECTTGGGGHHHHH
T ss_pred             CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             997999997732677658999999999968773000124553013244462889999999


No 66 
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=67.44  E-value=2.2  Score=19.69  Aligned_cols=29  Identities=14%  Similarity=0.159  Sum_probs=17.7

Q ss_pred             CCHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             31347899998630244433321000258
Q gi|254780628|r  153 NASEAIAAIHLARNIFPRMSFDLIYALPK  181 (395)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~v~iDli~GlPg  181 (395)
                      +.+++.+.++.+++.+..|-+|++++-.+
T Consensus        80 t~~df~~LV~~aH~~GIkVIlDvV~NHt~  108 (393)
T d1hvxa2          80 TKAQYLQAIQAAHAAGMQVYADVVFDHKG  108 (393)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred             CHHHHHHHHHHHHHCCCEEEEEEECCCCC
T ss_conf             99999999999998799899998435544


No 67 
>d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=66.25  E-value=3.4  Score=18.37  Aligned_cols=78  Identities=18%  Similarity=0.202  Sum_probs=47.6

Q ss_pred             CCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCC-CCHHHHHHHHHHHCCCCC----------CCCCCCCCCCC
Q ss_conf             1041002347766303454114323433201345542244-313478999986302444----------33321000258
Q gi|254780628|r  113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNH-NASEAIAAIHLARNIFPR----------MSFDLIYALPK  181 (395)
Q Consensus       113 ~P~~~~~~~l~~l~~~Gv~RiS~GvQs~~~~~l~~~~R~~-~~~~~~~~~~~~~~~~~~----------v~iDli~GlPg  181 (395)
                      -|.+-+.+.|..|.++|+|=+-|..             .| +.++..+.++.+|++-..          +.+.+-...|.
T Consensus        40 GPas~~~e~l~~Li~aGvnv~RiN~-------------SHg~~e~h~~~i~~iR~~~~~~~~~~il~~~~~I~~d~~~~~  106 (282)
T d2g50a2          40 GPASRSVETLKEMIKSGMNVARMNF-------------SHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPA  106 (282)
T ss_dssp             STTTCSHHHHHHHHHHTCCEEEEET-------------TSSCHHHHHHHHHHHHHHHHTTTTCTTTCCCCEEEEECCCCS
T ss_pred             CCCCCCHHHHHHHHHCCCCEEEEEC-------------CCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCC
T ss_conf             8987999999999986999999958-------------999999999999999999987278852346621233432222


Q ss_pred             CCCCCCCCCHHHHHHCCCCCEEE
Q ss_conf             54322111278875318001234
Q gi|254780628|r  182 QTMTQWEMELQRALSYAVDHLSL  204 (395)
Q Consensus       182 qt~e~~~~~l~~~~~l~p~~is~  204 (395)
                      -|..++ .++..+++.++|.|.+
T Consensus       107 l~~~di-~di~~a~~~~vD~ial  128 (282)
T d2g50a2         107 VSEKDI-QDLKFGVEQDVDMVFA  128 (282)
T ss_dssp             SCHHHH-HHHHHHHHTTCSEEEE
T ss_pred             CCCHHH-HHHHHHHHCCCCCEEE
T ss_conf             211088-8998766335664253


No 68 
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]}
Probab=66.23  E-value=2.2  Score=19.65  Aligned_cols=15  Identities=0%  Similarity=0.036  Sum_probs=10.3

Q ss_pred             CHHHHHHHHHHHHHC
Q ss_conf             999999999766404
Q gi|254780628|r   85 EPQNIALILDGIAKN   99 (395)
Q Consensus        85 ~~~~l~~ll~~i~~~   99 (395)
                      +.+++++|++.++++
T Consensus        91 t~~df~~LV~~aH~~  105 (357)
T d1gcya2          91 SDAQLRQAASALGGA  105 (357)
T ss_dssp             CHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHC
T ss_conf             999999999999963


No 69 
>d1z7ua1 a.4.5.69 (A:1-108) Hypothetical protein EF0647 {Enterococcus faecalis [TaxId: 1351]}
Probab=66.03  E-value=3.7  Score=18.19  Aligned_cols=51  Identities=16%  Similarity=0.257  Sum_probs=36.6

Q ss_pred             CCCHHHHHHHH-CCCH--HHHHHHHHHHCCCEEEEECC------EEEECHHHHHHHHHHH
Q ss_conf             99888999883-8996--49999999987994985598------9999567589899999
Q gi|254780628|r  340 GISVKDWEMLA-GRNL--DIECERNLQRQGFIERVQFS------RLRCTQRGMTMLDSVI  390 (395)
Q Consensus       340 Gid~~~~~~~f-g~~~--~~~~~~~L~~~Gli~~~~~~------~l~lT~~G~~~~d~I~  390 (395)
                      ...++++++.- |++-  ....+++|++.|+|.+....      .+.||++|+.+..-+.
T Consensus        32 ~~RF~el~~~l~gIS~~~Ls~rLk~L~~~glv~R~~~~~~p~~veY~LT~~G~~L~pil~   91 (108)
T d1z7ua1          32 TKRNGELMRALDGITQRVLTDRLREMEKDGLVHRESFNELPPRVEYTLTPEGYALYDALS   91 (108)
T ss_dssp             CBCHHHHHHHSTTCCHHHHHHHHHHHHHHTSEEEEEECCSSCEEEEEECHHHHHHHHHHH
T ss_pred             CCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCEEHHHHCHHHHHHHHHHH
T ss_conf             988999997773777668999999999789503431577765321132660778999999


No 70 
>d2akza1 c.1.11.1 (A:140-433) Enolase {Human (Homo sapiens), gamma isoform [TaxId: 9606]}
Probab=65.56  E-value=3.8  Score=18.13  Aligned_cols=37  Identities=14%  Similarity=0.149  Sum_probs=16.0

Q ss_pred             CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             244313478999986302444333210002585432211
Q gi|254780628|r  150 RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE  188 (395)
Q Consensus       150 R~~~~~~~~~~~~~~~~~~~~v~iDli~GlPgqt~e~~~  188 (395)
                      +.-++++..+.+..+-+-++-++|  .=+|..+..++|.
T Consensus       129 ~~~t~delid~y~~l~~kYPIisI--EDP~~E~D~~gw~  165 (294)
T d2akza1         129 RYITGDQLGALYQDFVRDYPVVSI--EDPFDQDDWAAWS  165 (294)
T ss_dssp             GCBCHHHHHHHHHHHHHHSCEEEE--ECCSCTTCHHHHH
T ss_pred             CEECHHHHHHHHHHHHCCCCEEEE--ECCCCCCCHHHHH
T ss_conf             142499999999998416675898--5787500014699


No 71 
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]}
Probab=64.96  E-value=2.4  Score=19.41  Aligned_cols=15  Identities=7%  Similarity=0.217  Sum_probs=7.6

Q ss_pred             CHHHHHHHHHHHHHC
Q ss_conf             999999999766404
Q gi|254780628|r   85 EPQNIALILDGIAKN   99 (395)
Q Consensus        85 ~~~~l~~ll~~i~~~   99 (395)
                      +.+++++|++.++++
T Consensus        77 t~~df~~Lv~~aH~~   91 (394)
T d2d3na2          77 TRSQLQAAVTSLKNN   91 (394)
T ss_dssp             CHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHC
T ss_conf             999999999999987


No 72 
>d1rd5a_ c.1.2.4 (A:) Trp synthase alpha-subunit {Maize (Zea mays) [TaxId: 4577]}
Probab=64.57  E-value=3.9  Score=18.01  Aligned_cols=86  Identities=16%  Similarity=0.162  Sum_probs=48.3

Q ss_pred             CCCCC-CHHHHHHHHHHCCCCCEEEECCCCCCH---------HHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             21041-002347766303454114323433201---------34554224431347899998630244433321000258
Q gi|254780628|r  112 ANPSS-VEVNNFQGYRKAGVNRISLGVQSLEEQ---------SLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK  181 (395)
Q Consensus       112 ~~P~~-~~~~~l~~l~~~Gv~RiS~GvQs~~~~---------~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli~GlPg  181 (395)
                      +.|+. .+.+.+..|.+.|++-|.+|+-.-|+-         ..+++...-+.+++.+.+..+++.....-+=|+|=-| 
T Consensus        26 G~P~~~~~~~~l~~l~~~G~DiiElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~~~~~r~~~~~p~ilm~Y~n~-  104 (261)
T d1rd5a_          26 GDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCPVVLLSYYKP-  104 (261)
T ss_dssp             TSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSSCEEEECCSHH-
T ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEECC-
T ss_conf             6898789999999999759999997788888676786035521323246842256666653025455675034421245-


Q ss_pred             CCCCCCCCCHHHHHHCCCCCE
Q ss_conf             543221112788753180012
Q gi|254780628|r  182 QTMTQWEMELQRALSYAVDHL  202 (395)
Q Consensus       182 qt~e~~~~~l~~~~~l~p~~i  202 (395)
                          .+..-++.+.+.+.+-+
T Consensus       105 ----~~~~~~~~~~~~GvdG~  121 (261)
T d1rd5a_         105 ----IMFRSLAKMKEAGVHGL  121 (261)
T ss_dssp             ----HHSCCTHHHHHTTCCEE
T ss_pred             ----HHHHHHHHHHHCCCEEE
T ss_conf             ----12677888875592054


No 73 
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]}
Probab=63.96  E-value=2.2  Score=19.61  Aligned_cols=26  Identities=8%  Similarity=-0.083  Sum_probs=12.5

Q ss_pred             CCHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             31347899998630244433321000
Q gi|254780628|r  153 NASEAIAAIHLARNIFPRMSFDLIYA  178 (395)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~v~iDli~G  178 (395)
                      +.+++.+.++.+++.+..|-+|+.++
T Consensus        96 t~~~~k~lv~~aH~~Gi~VilD~V~N  121 (381)
T d2aaaa2          96 TADNLKSLSDALHARGMYLMVDVVPD  121 (381)
T ss_dssp             CHHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred             CHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             88999999998866311110023445


No 74 
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]}
Probab=63.42  E-value=1.9  Score=20.14  Aligned_cols=29  Identities=7%  Similarity=0.033  Sum_probs=13.0

Q ss_pred             CCHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             31347899998630244433321000258
Q gi|254780628|r  153 NASEAIAAIHLARNIFPRMSFDLIYALPK  181 (395)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~v~iDli~GlPg  181 (395)
                      +.++..+.++.+++.+..|-+|++++--+
T Consensus        98 t~~d~~~lv~~~H~~Gi~vilD~V~NH~s  126 (382)
T d1wzla3          98 DLPTFRRLVDEAHRRGIKIILDAVFNHAG  126 (382)
T ss_dssp             CHHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred             CHHHHHHHHHHHHHCCCCEEEEEEECCCC
T ss_conf             78899999999975245157632101333


No 75 
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=63.00  E-value=1.9  Score=20.04  Aligned_cols=15  Identities=7%  Similarity=0.330  Sum_probs=8.3

Q ss_pred             CHHHHHHHHHHHHHC
Q ss_conf             999999999766404
Q gi|254780628|r   85 EPQNIALILDGIAKN   99 (395)
Q Consensus        85 ~~~~l~~ll~~i~~~   99 (395)
                      +.++++++++.+++.
T Consensus        98 t~~~~~~lv~~aH~~  112 (382)
T d1j0ha3          98 DKETLKTLIDRCHEK  112 (382)
T ss_dssp             CHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHC
T ss_conf             979999999986423


No 76 
>d1stza1 a.4.5.51 (A:14-100) Heat-inducible transcription repressor HrcA, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=62.74  E-value=4.2  Score=17.79  Aligned_cols=70  Identities=13%  Similarity=0.186  Sum_probs=45.2

Q ss_pred             CCHHHH-HHHHHHHH-HHHCCCCCHHHHHHHHCCCHH----HHHHHHHHHCCCEEEE--ECCEEEECHHHH-HHHHHHHH
Q ss_conf             499998-99999996-562379988899988389964----9999999987994985--598999956758-98999999
Q gi|254780628|r  321 LSSEQQ-ADEFLMMG-LRLREGISVKDWEMLAGRNLD----IECERNLQRQGFIERV--QFSRLRCTQRGM-TMLDSVIA  391 (395)
Q Consensus       321 Ls~~e~-~~e~l~~~-LR~~~Gid~~~~~~~fg~~~~----~~~~~~L~~~Gli~~~--~~~~l~lT~~G~-~~~d~I~~  391 (395)
                      ||+.++ +.+.++.. +....++.-..+.+.+|.++-    ...+..|++.|+|++.  ..++ .+|++|. +++|.++.
T Consensus         2 Lt~Rq~~IL~~Ive~y~~~g~Pv~s~~i~~~~~l~~S~aTIRn~m~~LE~~G~l~~~h~s~Gr-iPT~~g~r~yv~~ll~   80 (87)
T d1stza1           2 LNDRQRKVLYCIVREYIENKKPVSSQRVLEVSNIEFSSATIRNDMKKLEYLGYIYQPHTSAGR-IPTDKGLRFYYEEMLK   80 (87)
T ss_dssp             CCHHHHHHHHHHHHHHHHHCSCBCHHHHHHHSCCCSCHHHHHHHHHHHHHTTSEECCSSCSCB-EECHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCHHHHHHHHHHHCC
T ss_conf             498999999999999998098467999998708898989999999999987862488877877-6058899999999726


No 77 
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=62.41  E-value=4.3  Score=17.75  Aligned_cols=78  Identities=18%  Similarity=0.184  Sum_probs=50.2

Q ss_pred             CCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCC-CCHHHHHHHHHHHCC-----CCCCCCCCCCCCCCCCCCC
Q ss_conf             1041002347766303454114323433201345542244-313478999986302-----4443332100025854322
Q gi|254780628|r  113 NPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNH-NASEAIAAIHLARNI-----FPRMSFDLIYALPKQTMTQ  186 (395)
Q Consensus       113 ~P~~~~~~~l~~l~~~Gv~RiS~GvQs~~~~~l~~~~R~~-~~~~~~~~~~~~~~~-----~~~v~iDli~GlPgqt~e~  186 (395)
                      -|.+-+.+.|..|.++|+|=+-|..             .| +.++..+.++.+|++     +..|.+.+-...|.-|..+
T Consensus        28 GPas~~~e~l~~li~aG~dv~RlN~-------------SHg~~~~h~~~i~~iR~~~e~~~G~~v~i~~dl~~p~ltekD   94 (265)
T d1a3xa2          28 GPKTNNPETLVALRKAGLNIVRMNF-------------SHGSYEYHKSVIDNARKSEELYPGRPLAIALDTKGPALSEKD   94 (265)
T ss_dssp             CTTTCSHHHHHHHHHHTEEEEEEET-------------TSCCHHHHHHHHHHHHHHHHHCCCSCCBCEEECCCCSSCHHH
T ss_pred             CCCCCCHHHHHHHHHCCCCEEEEEC-------------CCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHCCCCH
T ss_conf             7887999999999986999999978-------------879999999999999998520467842110122101102444


Q ss_pred             CCCCHHHHHHCCCCCEEE
Q ss_conf             111278875318001234
Q gi|254780628|r  187 WEMELQRALSYAVDHLSL  204 (395)
Q Consensus       187 ~~~~l~~~~~l~p~~is~  204 (395)
                      . .|++.+++.++|.|.+
T Consensus        95 ~-~di~~a~~~~vD~ial  111 (265)
T d1a3xa2          95 K-EDLRFGVKNGVHMVFA  111 (265)
T ss_dssp             H-HHHHHHHHTTCCEECC
T ss_pred             H-HHHHHHHHCCCCEEEE
T ss_conf             9-9999865426516752


No 78 
>d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=62.14  E-value=2.5  Score=19.26  Aligned_cols=65  Identities=12%  Similarity=0.139  Sum_probs=32.3

Q ss_pred             CHHHHHHHHHHCCCCCEEEEC--CCC-------------CCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             002347766303454114323--433-------------20134554224431347899998630244433321000258
Q gi|254780628|r  117 VEVNNFQGYRKAGVNRISLGV--QSL-------------EEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK  181 (395)
Q Consensus       117 ~~~~~l~~l~~~Gv~RiS~Gv--Qs~-------------~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli~GlPg  181 (395)
                      +..+....|+++||+-|.|-.  ++.             ++.-.+.-.|--+.+++.+.++.+++.+..|-+|++++--+
T Consensus        24 i~~e~~~yL~~lG~taIwl~P~~e~~~~~~~~~~~y~gY~~~dY~v~~~~Gt~~dfk~Lv~~aH~~GI~VIlDvV~NH~~  103 (403)
T d1hx0a2          24 IALECERYLGPKGFGGVQVSPPNENIVVTNPSRPWWERYQPVSYKLCTRSGNENEFRDMVTRCNNVGVRIYVDAVINHMC  103 (403)
T ss_dssp             HHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEEEEECCSEEE
T ss_pred             HHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCC
T ss_conf             99999999998199879949681576678899987600368777148999999999999999986699799997124466


No 79 
>d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]}
Probab=61.74  E-value=3.3  Score=18.49  Aligned_cols=116  Identities=14%  Similarity=0.257  Sum_probs=61.0

Q ss_pred             EEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEE------------EECCCCC
Q ss_conf             9962888887899999999976640476444332113321041002347766303454114------------3234332
Q gi|254780628|r   74 IFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRIS------------LGVQSLE  141 (395)
Q Consensus        74 iy~GGGTPs~l~~~~l~~ll~~i~~~~~~~~~~e~t~E~~P~~~~~~~l~~l~~~Gv~RiS------------~GvQs~~  141 (395)
                      +|+=||+.++.+--    ||..+-..  ++...+|.+ +.|-.++...|...+.+|+++|-            +|.+|. 
T Consensus       126 lYVPGG~A~ypSsv----LM~aiPAk--vAGV~~Ivv-~tPp~~~~~~l~aa~~~Gv~~iy~~GGaqAIAAlAyGT~ti-  197 (431)
T d1k75a_         126 LYIPGGSAPLFSTV----LMLATPAS--IAGCKKVVL-CSPPPIADEILYAAQLCGVQDVFNVGGAQAIAALAFGTESV-  197 (431)
T ss_dssp             EECCCSSSCCHHHH----HHHHHHHH--HHTCSEEEE-EECSSCCHHHHHHHHHTTCCEEEECCHHHHHHHHHHCCSSS-
T ss_pred             EECCCCCCCCHHHH----HHHHHHHH--HCCCCCEEE-EECCCCCCHHHHHHHHCCCCCEEECCCHHHHHHHHHCCCCC-
T ss_conf             33157876536889----98878777--428871069-71787751677999972834067627768878776336752-


Q ss_pred             CHHHHHHHCCCCCHHHHHHHHHHHCC--C--CCCCCCCCCCCCCC---------CCCCCCCCHHHHHHCCCCCEEE
Q ss_conf             01345542244313478999986302--4--44333210002585---------4322111278875318001234
Q gi|254780628|r  142 EQSLRFLGRNHNASEAIAAIHLARNI--F--PRMSFDLIYALPKQ---------TMTQWEMELQRALSYAVDHLSL  204 (395)
Q Consensus       142 ~~~l~~~~R~~~~~~~~~~~~~~~~~--~--~~v~iDli~GlPgq---------t~e~~~~~l~~~~~l~p~~is~  204 (395)
                      +++-+..|-    ...  -+..+++.  +  ..|.||++.| |.+         .++-+..||=.=.+-+|+.-.+
T Consensus       198 ~~VdkI~GP----GN~--yV~~AK~~v~g~~~~vgID~~aG-PSEv~viAD~~a~p~~iAaDllaQAEH~~~a~~i  266 (431)
T d1k75a_         198 PKVDKIFGP----GNA--FVTEAKRQVSQRLDGAAIDMPAG-PSEVLVIADSGATPDFVASDLLSQAEHGPDSQVI  266 (431)
T ss_dssp             CCCSEEECC----CSH--HHHHHHHHHHHSTTSCEESCCCC-CCEEEEEECTTSCHHHHHHHHHHHHTTCTTCEEE
T ss_pred             CCCCEEECC----CCH--HHHHHHHHHCCCCCCCCCCCCCC-CCEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEE
T ss_conf             420034168----862--55526773226677655433457-7538998268899899999998526876665169


No 80 
>d1yyva1 a.4.5.69 (A:9-122) Putative transcriptional regulator YtfH {Salmonella typhimurium [TaxId: 90371]}
Probab=61.42  E-value=4.4  Score=17.64  Aligned_cols=50  Identities=22%  Similarity=0.304  Sum_probs=35.9

Q ss_pred             CCHHHHHHHH-CCCH--HHHHHHHHHHCCCEEEEECC------EEEECHHHHHHHHHHH
Q ss_conf             9888999883-8996--49999999987994985598------9999567589899999
Q gi|254780628|r  341 ISVKDWEMLA-GRNL--DIECERNLQRQGFIERVQFS------RLRCTQRGMTMLDSVI  390 (395)
Q Consensus       341 id~~~~~~~f-g~~~--~~~~~~~L~~~Gli~~~~~~------~l~lT~~G~~~~d~I~  390 (395)
                      ..++++++.- |++-  ....+++|++.|+|.+....      .+.||++|+.+..-+.
T Consensus        38 ~RF~el~~~l~gis~~~Ls~rL~~Le~~glv~R~~~~~~p~~veY~LT~~G~~L~~il~   96 (114)
T d1yyva1          38 HRFSDLRRKMGGVSEKMLAQSLQALEQDGFLNRVSYPVVPPHVEYSLTPLGEQVSDKVA   96 (114)
T ss_dssp             EEHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEEEECSSSCEEEEEECHHHHHHHHHHH
T ss_pred             CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             99999997740335247999899999988873002578884157675171889999999


No 81 
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]}
Probab=60.65  E-value=3.1  Score=18.71  Aligned_cols=23  Identities=9%  Similarity=0.109  Sum_probs=9.0

Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             32100025854322111278875
Q gi|254780628|r  173 FDLIYALPKQTMTQWEMELQRAL  195 (395)
Q Consensus       173 iDli~GlPgqt~e~~~~~l~~~~  195 (395)
                      +|....+|......+...+...+
T Consensus       172 ~Daakhv~~~~~~~~~~~~~~~~  194 (344)
T d1ua7a2         172 FDAAKHIELPDDGSYGSQFWPNI  194 (344)
T ss_dssp             ETTGGGSCCTTSGGGCCSHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHHH
T ss_conf             83111137055677899999998


No 82 
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]}
Probab=59.69  E-value=2.6  Score=19.15  Aligned_cols=65  Identities=11%  Similarity=0.072  Sum_probs=31.7

Q ss_pred             HHHHHHHHCCCCCEEEE-CCCC-C------CHHHHHHH-CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf             34776630345411432-3433-2------01345542-24431347899998630244433321000258543
Q gi|254780628|r  120 NNFQGYRKAGVNRISLG-VQSL-E------EQSLRFLG-RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTM  184 (395)
Q Consensus       120 ~~l~~l~~~Gv~RiS~G-vQs~-~------~~~l~~~~-R~~~~~~~~~~~~~~~~~~~~v~iDli~GlPgqt~  184 (395)
                      ++|..|++.|||-|.|- |..+ .      ..-...+. +--+.+++.+.++.+++.+..|-+|+.++--+..-
T Consensus        35 ~kLdYLk~LGv~~I~l~Pi~~~~~~~~GY~~~d~~~vd~~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~~~~~  108 (479)
T d1uoka2          35 SKLDYLKELGIDVIWLSPVYESPNDDNGYDISDYCKIMNEFGTMEDWDELLHEMHERNMKLMMDLVVNHTSDEH  108 (479)
T ss_dssp             TTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTS
T ss_pred             HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC
T ss_conf             84599997499979979873799999996854667757133999999999999998789899666423444442


No 83 
>d1qtwa_ c.1.15.1 (A:) Endonuclease IV {Escherichia coli [TaxId: 562]}
Probab=59.55  E-value=4.8  Score=17.43  Aligned_cols=63  Identities=13%  Similarity=0.196  Sum_probs=27.5

Q ss_pred             EEEECC---CCCCCCCHHHHHHHHHHHHHCCCCC-----CCCCCCCC-CCCCCC--------HHHHHHHHHHCCCCCEEE
Q ss_conf             999628---8888789999999997664047644-----43321133-210410--------023477663034541143
Q gi|254780628|r   73 SIFFGG---GTPSLIEPQNIALILDGIAKNWTVS-----SNVEITIE-ANPSSV--------EVNNFQGYRKAGVNRISL  135 (395)
Q Consensus        73 ~iy~GG---GTPs~l~~~~l~~ll~~i~~~~~~~-----~~~e~t~E-~~P~~~--------~~~~l~~l~~~Gv~RiS~  135 (395)
                      .||.++   -..+-++++..+++-+.++++ ++.     ..+...+. ++|+.-        ....++..++.|++.+.+
T Consensus        30 eif~~~P~~w~~~~~~~~~~~~~k~~~~~~-gl~~~~~~~~~p~~~n~~~~~~~~r~~s~~~~~~~i~~a~~lG~~~vv~  108 (285)
T d1qtwa_          30 ALFTKNQRQWRAAPLTTQTIDEFKAACEKY-HYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNF  108 (285)
T ss_dssp             ECCSSCSSCSSCCCCCHHHHHHHHHHHHHT-TCCGGGBCCBCCTTCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHHHHC-CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf             997999777788999999999999999981-9984056742774001256218899999999999999999809983034


Q ss_pred             E
Q ss_conf             2
Q gi|254780628|r  136 G  136 (395)
Q Consensus       136 G  136 (395)
                      -
T Consensus       109 h  109 (285)
T d1qtwa_         109 H  109 (285)
T ss_dssp             C
T ss_pred             E
T ss_conf             0


No 84 
>d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]}
Probab=59.08  E-value=2.8  Score=19.01  Aligned_cols=28  Identities=11%  Similarity=0.003  Sum_probs=17.2

Q ss_pred             CCHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             3134789999863024443332100025
Q gi|254780628|r  153 NASEAIAAIHLARNIFPRMSFDLIYALP  180 (395)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~v~iDli~GlP  180 (395)
                      +.+++.+.++.+++.+..|-+|+.++--
T Consensus       115 t~~dfk~LV~~aH~~Gi~VilD~V~NH~  142 (406)
T d3bmva4         115 SFTDFQNLINTAHAHNIKVIIDFAPNHT  142 (406)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEEECTTEE
T ss_pred             CHHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf             1899999999997436431365201566


No 85 
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=57.60  E-value=4  Score=17.97  Aligned_cols=25  Identities=16%  Similarity=0.141  Sum_probs=10.8

Q ss_pred             CHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             1347899998630244433321000
Q gi|254780628|r  154 ASEAIAAIHLARNIFPRMSFDLIYA  178 (395)
Q Consensus       154 ~~~~~~~~~~~~~~~~~v~iDli~G  178 (395)
                      .++..+.++.+++.+..|-+|+.++
T Consensus        86 ~~d~~~LV~~aH~~GikVIlD~V~N  110 (361)
T d1mxga2          86 KEELVRLIQTAHAYGIKVIADVVIN  110 (361)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred             HHHHHHHHHHHHHCCCEEEEEEEEC
T ss_conf             9999999999997799799986032


No 86 
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]}
Probab=57.41  E-value=3.1  Score=18.72  Aligned_cols=15  Identities=0%  Similarity=0.217  Sum_probs=8.0

Q ss_pred             CHHHHHHHHHHHHHC
Q ss_conf             999999999766404
Q gi|254780628|r   85 EPQNIALILDGIAKN   99 (395)
Q Consensus        85 ~~~~l~~ll~~i~~~   99 (395)
                      +.++++++++.++++
T Consensus        96 t~~dfk~lv~~~H~~  110 (381)
T d2guya2          96 TADDLKALSSALHER  110 (381)
T ss_dssp             CHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHH
T ss_conf             778999999898860


No 87 
>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]}
Probab=57.18  E-value=2.8  Score=18.97  Aligned_cols=15  Identities=7%  Similarity=0.144  Sum_probs=7.8

Q ss_pred             CHHHHHHHHHHHHHC
Q ss_conf             999999999766404
Q gi|254780628|r   85 EPQNIALILDGIAKN   99 (395)
Q Consensus        85 ~~~~l~~ll~~i~~~   99 (395)
                      +.+++++|++.++++
T Consensus       106 t~~d~k~Lv~~~H~~  120 (407)
T d1qhoa4         106 NWTTFDTLVNDAHQN  120 (407)
T ss_dssp             CHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHC
T ss_conf             889999999986630


No 88 
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]}
Probab=57.06  E-value=4.2  Score=17.82  Aligned_cols=33  Identities=9%  Similarity=0.126  Sum_probs=18.4

Q ss_pred             HHHCC-CCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             86302-4443332100025854322111278875
Q gi|254780628|r  163 LARNI-FPRMSFDLIYALPKQTMTQWEMELQRAL  195 (395)
Q Consensus       163 ~~~~~-~~~v~iDli~GlPgqt~e~~~~~l~~~~  195 (395)
                      ++.+. .+-+=+|.+.+++.+....+.+.+...+
T Consensus       150 Wl~~~gvDGfR~Daa~~i~~~~~~~~~~~~~~~~  183 (400)
T d1eh9a3         150 WIKEYNVDGFRLDAVHAIIDTSPKHILEEIADVV  183 (400)
T ss_dssp             HHHHSCCCCEEETTGGGCCCCSSSCHHHHHHHHH
T ss_pred             HHHHCCCCEEEEECHHHHCCHHHHHHHHHHHHHH
T ss_conf             8752466368860434415114565589999987


No 89 
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]}
Probab=56.27  E-value=4.1  Score=17.84  Aligned_cols=15  Identities=7%  Similarity=0.186  Sum_probs=8.3

Q ss_pred             CHHHHHHHHHHHHHC
Q ss_conf             999999999766404
Q gi|254780628|r   85 EPQNIALILDGIAKN   99 (395)
Q Consensus        85 ~~~~l~~ll~~i~~~   99 (395)
                      +.++++++++.+++.
T Consensus        96 t~~df~~lv~~~h~~  110 (382)
T d1ea9c3          96 DKDTLKKLVDLCHER  110 (382)
T ss_dssp             CHHHHHHHHHHHTTT
T ss_pred             CHHHHHHHHHHHHHH
T ss_conf             778999999999862


No 90 
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]}
Probab=56.20  E-value=3.8  Score=18.12  Aligned_cols=62  Identities=11%  Similarity=0.103  Sum_probs=42.8

Q ss_pred             HHHHHHHHHCCCCCEEEEC--CC---CCCH-----HHHHHHC-CCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             2347766303454114323--43---3201-----3455422-443134789999863024443332100025
Q gi|254780628|r  119 VNNFQGYRKAGVNRISLGV--QS---LEEQ-----SLRFLGR-NHNASEAIAAIHLARNIFPRMSFDLIYALP  180 (395)
Q Consensus       119 ~~~l~~l~~~Gv~RiS~Gv--Qs---~~~~-----~l~~~~R-~~~~~~~~~~~~~~~~~~~~v~iDli~GlP  180 (395)
                      .++|..|++.|||-|.|-.  +|   .++.     -...++. --|.++..+.++.+++.+..|-+|++++--
T Consensus       116 ~~kLdYLk~LGVt~I~L~Pi~~~p~~~sd~GY~v~dy~~Vdp~lGt~edl~~Lv~~aH~rGI~VilD~V~NHt  188 (554)
T d1g5aa2         116 KDKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAALHEAGISAVVDFIFNHT  188 (554)
T ss_dssp             HTTHHHHHHHTCSEEEECCCBCCCSSCSTTTTSCSCSSSBCTTTCCHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred             HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf             9856899973999899798878998888999586667877823499999999999999879989998786778


No 91 
>d2fswa1 a.4.5.69 (A:3-104) Hypothetical protein PG0823 {Porphyromonas gingivalis [TaxId: 837]}
Probab=56.08  E-value=5.5  Score=17.05  Aligned_cols=49  Identities=20%  Similarity=0.238  Sum_probs=35.1

Q ss_pred             CCHHHHHHHH-CCCH--HHHHHHHHHHCCCEEEEECC------EEEECHHHHHHHHHH
Q ss_conf             9888999883-8996--49999999987994985598------999956758989999
Q gi|254780628|r  341 ISVKDWEMLA-GRNL--DIECERNLQRQGFIERVQFS------RLRCTQRGMTMLDSV  389 (395)
Q Consensus       341 id~~~~~~~f-g~~~--~~~~~~~L~~~Gli~~~~~~------~l~lT~~G~~~~d~I  389 (395)
                      ..++++++.- |++-  -...+++|++.|+|.+....      .+.||++|+.+..-+
T Consensus        34 ~rF~el~~~l~gIs~~~Ls~rLkeL~~~glv~r~~~~~~p~~veY~LT~~G~~L~pil   91 (102)
T d2fswa1          34 IRYGELKRAIPGISEKMLIDELKFLCGKGLIKKKQYPEVPPRVEYSLTPLGEKVLPII   91 (102)
T ss_dssp             EEHHHHHHHSTTCCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECHHHHTTHHHH
T ss_pred             CCHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCEEHHHHHHHHHHHHHHH
T ss_conf             8899997657255646899999999988960432458889731326547288999999


No 92 
>d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]}
Probab=55.94  E-value=3.2  Score=18.63  Aligned_cols=14  Identities=0%  Similarity=0.164  Sum_probs=10.9

Q ss_pred             HHHHHHHHHHHHHC
Q ss_conf             99999999766404
Q gi|254780628|r   86 PQNIALILDGIAKN   99 (395)
Q Consensus        86 ~~~l~~ll~~i~~~   99 (395)
                      .+++++|++.++++
T Consensus       110 ~~d~~~LV~~aH~~  123 (475)
T d1bf2a3         110 TAEFQAMVQAFHNA  123 (475)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHC
T ss_conf             99999999999855


No 93 
>d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]}
Probab=55.45  E-value=5.3  Score=17.16  Aligned_cols=129  Identities=12%  Similarity=0.017  Sum_probs=60.5

Q ss_pred             CHHHHHHHHHHCCCCCEEEECC--CCCCHHHHHHHCCC--CCHHHHHHHHHHHCCCCCCCCCCCC--C-----CCC-CCC
Q ss_conf             0023477663034541143234--33201345542244--3134789999863024443332100--0-----258-543
Q gi|254780628|r  117 VEVNNFQGYRKAGVNRISLGVQ--SLEEQSLRFLGRNH--NASEAIAAIHLARNIFPRMSFDLIY--A-----LPK-QTM  184 (395)
Q Consensus       117 ~~~~~l~~l~~~Gv~RiS~GvQ--s~~~~~l~~~~R~~--~~~~~~~~~~~~~~~~~~v~iDli~--G-----lPg-qt~  184 (395)
                      +|++.+..+++.|||-|.|.|-  .+-+..   -+...  -.+.+.++++.+++.+..|-||+--  |     .|+ .+.
T Consensus        62 ~t~~~i~~ik~~Gfn~vRiPv~w~~~~~~~---~~~i~~~~l~~v~~vV~~a~~~Gl~VIldlHh~~~~~~~~~~~~~~~  138 (380)
T d1edga_          62 TTKQMIDAIKQKGFNTVRIPVSWHPHVSGS---DYKISDVWMNRVQEVVNYCIDNKMYVILNTHHDVDKVKGYFPSSQYM  138 (380)
T ss_dssp             CCHHHHHHHHHHTCCEEEECCCCGGGEETT---TTEECHHHHHHHHHHHHHHHTTTCEEEEECCSCBCTTTSBCSSGGGH
T ss_pred             CCHHHHHHHHHCCCCEEEECCCHHHHCCCC---CCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCC
T ss_conf             669999999986998799734078826899---88529899999999999999769979984566788776667865675


Q ss_pred             ----CCCCCCHHHHH-HC--CCCCEEEEEEEEECCCEEHHHHHCCCCCC-C---HHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             ----22111278875-31--80012346468825960001454498021-1---0356788999865578870962
Q gi|254780628|r  185 ----TQWEMELQRAL-SY--AVDHLSLYQLTIEKGTLFYKMHKDGDLVL-P---SENVAVDLYNLTQSITSAHGLH  249 (395)
Q Consensus       185 ----e~~~~~l~~~~-~l--~p~~is~Y~l~i~~~t~l~~~~~~~~~~~-p---~~~~~~~~~~~a~e~L~~~GY~  249 (395)
                          +.+.+-.+.+. .+  .++++ +|.+.-||.-......-...... .   .-....++++.+.+..++.|..
T Consensus       139 ~~~~~~~~~~W~qiA~~fkd~~~~l-~fel~NEP~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~IR~~~~~  213 (380)
T d1edga_         139 ASSKKYITSVWAQIAARFANYDEHL-IFEGMNEPRLVGHANEWWPELTNSDVVDSINCINQLNQDFVNTVRATGGK  213 (380)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCCTTE-EEECCSSCCCTTSTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHTCGG
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCEE-EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             7799999999999887606898669-99621344446786544532223108999999999999999999984457


No 94 
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]}
Probab=54.73  E-value=3.6  Score=18.23  Aligned_cols=29  Identities=10%  Similarity=0.024  Sum_probs=16.8

Q ss_pred             CCHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             31347899998630244433321000258
Q gi|254780628|r  153 NASEAIAAIHLARNIFPRMSFDLIYALPK  181 (395)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~v~iDli~GlPg  181 (395)
                      +.+++.+.++.+++.+..|=+|+.++--+
T Consensus        63 t~~dfk~LV~~aH~~GI~VilDvV~NH~~   91 (354)
T d1g94a2          63 NRAQFIDMVNRCSAAGVDIYVDTLINHMA   91 (354)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEEEECSEEC
T ss_pred             CHHHHHHHHHHHHCCCCEEEEEEECCCCC
T ss_conf             99999999999841676069985323245


No 95 
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]}
Probab=54.31  E-value=4  Score=17.97  Aligned_cols=15  Identities=7%  Similarity=0.204  Sum_probs=7.5

Q ss_pred             CHHHHHHHHHHHHHC
Q ss_conf             999999999766404
Q gi|254780628|r   85 EPQNIALILDGIAKN   99 (395)
Q Consensus        85 ~~~~l~~ll~~i~~~   99 (395)
                      +.+++++|++.++++
T Consensus        77 t~~df~~Lv~~aH~~   91 (478)
T d1m53a2          77 TMEDFDSLVAEMKKR   91 (478)
T ss_dssp             CHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHC
T ss_conf             999999999999987


No 96 
>d1m1ha2 d.58.42.1 (A:5-50,A:132-186) N-utilization substance G protein NusG, N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=53.59  E-value=2.4  Score=19.48  Aligned_cols=20  Identities=30%  Similarity=0.607  Sum_probs=12.8

Q ss_pred             CCCCCCCCHHHHHHHHHHHH
Q ss_conf             88888789999999997664
Q gi|254780628|r   78 GGTPSLIEPQNIALILDGIA   97 (395)
Q Consensus        78 GGTPs~l~~~~l~~ll~~i~   97 (395)
                      ||.|+-++.+++++|+..++
T Consensus        81 ~~~P~pl~~~Ev~~il~~v~  100 (101)
T d1m1ha2          81 GGKPVPLKEEEVQNILNQIK  100 (101)
T ss_dssp             TTEECEECHHHHHHHHHHTT
T ss_pred             CCCCCCCCHHHHHHHHHHHC
T ss_conf             98417699999999999863


No 97 
>d1qzza1 a.4.5.29 (A:10-101) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}
Probab=53.42  E-value=5.5  Score=17.02  Aligned_cols=49  Identities=20%  Similarity=0.170  Sum_probs=38.3

Q ss_pred             CCCCHHHHHHHHCCCHH--HHHHHHHHHCCCEEEEECC--EEEECHHHHHHHH
Q ss_conf             79988899988389964--9999999987994985598--9999567589899
Q gi|254780628|r  339 EGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS--RLRCTQRGMTMLD  387 (395)
Q Consensus       339 ~Gid~~~~~~~fg~~~~--~~~~~~L~~~Gli~~~~~~--~l~lT~~G~~~~d  387 (395)
                      .+.+..++.++.|.+..  ..+++.|...|++++.+++  .+.+|+.|..+.|
T Consensus        39 gp~t~~eLA~~~g~~~~~l~rLlr~L~a~gll~~~~d~~~~~~~t~~g~lL~d   91 (92)
T d1qzza1          39 GADTLAGLADRTDTHPQALSRLVRHLTVVGVLEGGEKQGRPLRPTRLGMLLAD   91 (92)
T ss_dssp             TCCSHHHHHHHHTCCHHHHHHHHHHHHHTTSEECCCC-CCCCEECTTGGGGST
T ss_pred             CCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCEECCCHHHHHCCC
T ss_conf             99999999988783916999999999877983640698733535388886058


No 98 
>d1rqba2 c.1.10.5 (A:4-306) Transcarboxylase 5S subunit, N-terminal domain {Propionibacterium freudenreichii shermanii [TaxId: 1752]}
Probab=53.00  E-value=6.1  Score=16.73  Aligned_cols=79  Identities=11%  Similarity=0.103  Sum_probs=44.9

Q ss_pred             CCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCC-CCCCCCCCCCCCCHH
Q ss_conf             0410023477663034541143234332013455422443134789999863024443332100-025854322111278
Q gi|254780628|r  114 PSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIY-ALPKQTMTQWEMELQ  192 (395)
Q Consensus       114 P~~~~~~~l~~l~~~Gv~RiS~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli~-GlPgqt~e~~~~~l~  192 (395)
                      |+......+......+++.+...            ......+....+++.++..+..+.+.++. .-|.-+.+.+.+.++
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~r~~------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  168 (303)
T d1rqba2         101 NDEVVDRFVDKSAENGMDVFRVF------------DAMNDPRNMAHAMAAVKKAGKHAQGTICYTISPVHTVEGYVKLAG  168 (303)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEEC------------CTTCCTHHHHHHHHHHHHTTCEEEEEEECCCSTTCCHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHH
T ss_conf             12566777777888654687540------------037789999999999997388289998855788888999999999


Q ss_pred             HHHHCCCCCEEE
Q ss_conf             875318001234
Q gi|254780628|r  193 RALSYAVDHLSL  204 (395)
Q Consensus       193 ~~~~l~p~~is~  204 (395)
                      .+.+.+++.|++
T Consensus       169 ~~~~~G~~~i~l  180 (303)
T d1rqba2         169 QLLDMGADSIAL  180 (303)
T ss_dssp             HHHHTTCSEEEE
T ss_pred             HHHHCCCCEEEE
T ss_conf             998439857760


No 99 
>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.81  E-value=2.1  Score=19.85  Aligned_cols=10  Identities=50%  Similarity=1.494  Sum_probs=8.1

Q ss_pred             CCCCCCCEEE
Q ss_conf             3765773024
Q gi|254780628|r   31 KCPYCDFNSH   40 (395)
Q Consensus        31 ~C~yC~f~~~   40 (395)
                      +|+||+|.+.
T Consensus         4 kC~~CsFDtk   13 (29)
T d1x5wa2           4 KCNYCSFDTK   13 (29)
T ss_dssp             ECSSSSCEES
T ss_pred             CCCEECCCCC
T ss_conf             2550024565


No 100
>d1y0ua_ a.4.5.5 (A:) Putative arsenical resistance operon repressor AF0168 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=52.75  E-value=4.9  Score=17.37  Aligned_cols=47  Identities=15%  Similarity=0.075  Sum_probs=32.3

Q ss_pred             CCCCCHHHHHHHHCCCHHH-HHHHHHHHCCCEEEEECCEEEECHHHHH
Q ss_conf             3799888999883899649-9999999879949855989999567589
Q gi|254780628|r  338 REGISVKDWEMLAGRNLDI-ECERNLQRQGFIERVQFSRLRCTQRGMT  384 (395)
Q Consensus       338 ~~Gid~~~~~~~fg~~~~~-~~~~~L~~~Gli~~~~~~~l~lT~~G~~  384 (395)
                      ..|-+.+++.+.++.+-.+ ++.-...+.|+...-.+++|++|..|++
T Consensus        41 ~kgrsedEIm~~l~LSkkqldYHLk~LE~GfciErvge~w~~T~~G~i   88 (89)
T d1y0ua_          41 DKGRSEEEIMQTLSLSKKQLDYHLKVLEAGFCIERVGERWVVTDAGKI   88 (89)
T ss_dssp             HTTCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTEEEECTTTCC
T ss_pred             HCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCEEECCCCCC
T ss_conf             734789999999565799999999998746126861882355325423


No 101
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]}
Probab=52.66  E-value=3.8  Score=18.11  Aligned_cols=15  Identities=7%  Similarity=0.093  Sum_probs=8.1

Q ss_pred             CHHHHHHHHHHHHHC
Q ss_conf             999999999766404
Q gi|254780628|r   85 EPQNIALILDGIAKN   99 (395)
Q Consensus        85 ~~~~l~~ll~~i~~~   99 (395)
                      +.+++++|++.++++
T Consensus       102 t~~df~~lv~~~H~~  116 (422)
T d1h3ga3         102 SNEDFVRLSTEARKR  116 (422)
T ss_dssp             CHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHH
T ss_conf             999999999999973


No 102
>d1xd3a_ d.3.1.6 (A:) Ubiquitin carboxyl-terminal hydrolase UCH-l3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.01  E-value=3.6  Score=18.26  Aligned_cols=104  Identities=16%  Similarity=0.209  Sum_probs=65.7

Q ss_pred             CCCCCCCCCCHHHHHHHHHHCCCC-CEEE-ECCCCCCHHHHHHHCCCCC--------HHHH--HHHHH--HHCCCCCCCC
Q ss_conf             113321041002347766303454-1143-2343320134554224431--------3478--99998--6302444333
Q gi|254780628|r  108 ITIEANPSSVEVNNFQGYRKAGVN-RISL-GVQSLEEQSLRFLGRNHNA--------SEAI--AAIHL--ARNIFPRMSF  173 (395)
Q Consensus       108 ~t~E~~P~~~~~~~l~~l~~~Gv~-RiS~-GvQs~~~~~l~~~~R~~~~--------~~~~--~~~~~--~~~~~~~v~i  173 (395)
                      +.+|++|+-++    ..+++.||. -+++ .|=|+|++.|..+-|+--+        +...  +.-+.  ....+..++=
T Consensus         6 ~pLESnP~vft----~~~~~lGv~~~~~f~Dvysld~d~L~~ip~Pv~avI~Lfp~~~~~e~~~~~~~~~~~~~~~~~~~   81 (229)
T d1xd3a_           6 LPLEANPEVTN----QFLKQLGLHPNWQFVDVYGMDPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTS   81 (229)
T ss_dssp             CCCBCCHHHHH----HHHHHTTBCTTEEEEECCCSSHHHHTTSCSCEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCT
T ss_pred             EEECCCHHHHH----HHHHHHCCCCCCEEEEECCCCHHHHHHCCCCCEEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCC
T ss_conf             65037979999----99998199998789992227999995047775799999977703544311123445556677775


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHC--CCCCEEEEEEEEECCCEEHHHHHCC
Q ss_conf             210002585432211127887531--8001234646882596000145449
Q gi|254780628|r  174 DLIYALPKQTMTQWEMELQRALSY--AVDHLSLYQLTIEKGTLFYKMHKDG  222 (395)
Q Consensus       174 Dli~GlPgqt~e~~~~~l~~~~~l--~p~~is~Y~l~i~~~t~l~~~~~~~  222 (395)
                      ++.|  -.||......|+..+-.+  .++++     .+.+|+.|.+..+..
T Consensus        82 ~v~f--~kQti~NACgT~Allh~l~N~~~~~-----~i~~gs~L~~f~~~t  125 (229)
T d1xd3a_          82 SVYF--MKQTISNACGTIGLIHAIANNKDKM-----HFESGSTLKKFLEES  125 (229)
T ss_dssp             TCCC--CCCCSBTCHHHHHHHHHHHTTGGGC-----CBCTTCHHHHHHHHH
T ss_pred             CCEE--HHHHHHHHHHHHHHHHHHHCCCCCC-----CCCCCHHHHHHHHHC
T ss_conf             5245--3654410268999999985686433-----447767899999972


No 103
>d1xmaa_ a.4.5.61 (A:) Predicted transcriptional regulator {Clostridium thermocellum [TaxId: 1515]}
Probab=49.93  E-value=6.8  Score=16.42  Aligned_cols=38  Identities=16%  Similarity=0.257  Sum_probs=27.3

Q ss_pred             HHHHHHHHHCCCEEE----EECC----EEEECHHHHHHHHHHHHHH
Q ss_conf             999999998799498----5598----9999567589899999986
Q gi|254780628|r  356 IECERNLQRQGFIER----VQFS----RLRCTQRGMTMLDSVIANL  393 (395)
Q Consensus       356 ~~~~~~L~~~Gli~~----~~~~----~l~lT~~G~~~~d~I~~~l  393 (395)
                      .+.++.|+++|||+.    .+++    .+.+|++|+..+.....++
T Consensus        46 Y~~L~rLe~~GlI~~~~~~~~~g~~rk~Y~iT~~G~~~l~~~~~~~   91 (103)
T d1xmaa_          46 YSAFARLEKNGYIKSYYGEETQGKRRTYYRITPEGIKYYKQKCEEW   91 (103)
T ss_dssp             HHHHHHHHHTTSEEEEEEEEC--CEEEEEEECHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCEEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHH
T ss_conf             9999999988994788631689987669998988999999999999


No 104
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]}
Probab=48.95  E-value=6.2  Score=16.68  Aligned_cols=14  Identities=0%  Similarity=0.097  Sum_probs=8.1

Q ss_pred             HHHHHHHHHHHHHC
Q ss_conf             99999999766404
Q gi|254780628|r   86 PQNIALILDGIAKN   99 (395)
Q Consensus        86 ~~~l~~ll~~i~~~   99 (395)
                      .+++++|++.+++.
T Consensus        78 ~~df~~Lv~~~H~~   91 (393)
T d1e43a2          78 KSELQDAIGSLHSR   91 (393)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHC
T ss_conf             99999999999986


No 105
>d1xkya1 c.1.10.1 (A:1-292) Dihydrodipicolinate synthase {Bacillus anthracis [TaxId: 1392]}
Probab=47.79  E-value=7.3  Score=16.20  Aligned_cols=125  Identities=10%  Similarity=0.185  Sum_probs=69.6

Q ss_pred             HHHHHHHHHHHHHHHCCCEEEEEEECCCCC--CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC--HHHHHHHHHH
Q ss_conf             999999999998761895058999628888--878999999999766404764443321133210410--0234776630
Q gi|254780628|r   52 IQSFLTEMQWMRQLTGPRSISSIFFGGGTP--SLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSV--EVNNFQGYRK  127 (395)
Q Consensus        52 ~~~l~~Ei~~~~~~~~~~~~~~iy~GGGTP--s~l~~~~l~~ll~~i~~~~~~~~~~e~t~E~~P~~~--~~~~l~~l~~  127 (395)
                      ++++.+.++.+..    .-++.++++|.|-  ..|+.++-.++++.+.+...  +...+-+-+...+.  +-+..+..++
T Consensus        23 ~~~~~~~i~~l~~----~Gv~gl~~~G~tGE~~~Ls~~Er~~l~~~~~~~~~--~~~~vi~gv~~~s~~~~i~~a~~a~~   96 (292)
T d1xkya1          23 FAKTTKLVNYLID----NGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVD--KRVPVIAGTGSNNTHASIDLTKKATE   96 (292)
T ss_dssp             HHHHHHHHHHHHH----TTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT--TSSCEEEECCCSCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH----CCCCEEEECEECCCHHHCCHHHHHHHHHHHHHHHC--CCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf             9999999999997----79998997758651666989999999999999818--98519993574219999999999998


Q ss_pred             CCCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC-CCCCCCCCCCCCCC-CCHHHH
Q ss_conf             34541143234332013455422443134789999863024443332-10002585432211-127887
Q gi|254780628|r  128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD-LIYALPKQTMTQWE-MELQRA  194 (395)
Q Consensus       128 ~Gv~RiS~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iD-li~GlPgqt~e~~~-~~l~~~  194 (395)
                      .|++-+.+..-.+.         ..+.+++.+-++.+-++   +++. ++|..|.-|-..+. +.+..+
T Consensus        97 ~Gad~ilv~pP~~~---------~~s~~~i~~~~~~v~~~---~~~pi~iYn~P~~~~~~~~~~~~~~l  153 (292)
T d1xkya1          97 VGVDAVMLVAPYYN---------KPSQEGMYQHFKAIAES---TPLPVMLYNVPGRSIVQISVDTVVRL  153 (292)
T ss_dssp             TTCSEEEEECCCSS---------CCCHHHHHHHHHHHHHT---CSSCEEEEECHHHHSSCCCHHHHHHH
T ss_pred             CCCCEEEECCCCCC---------CCCHHHHHHHHHHHHCC---CCCCEEEEECCCCCCCCCCHHHHHHH
T ss_conf             49999997898788---------98999999999998436---89868998478645775698997654


No 106
>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=47.22  E-value=7.4  Score=16.19  Aligned_cols=31  Identities=13%  Similarity=-0.059  Sum_probs=17.8

Q ss_pred             CHHHHHHHHHHHCCCCCCCCCCCCCCCC-CCC
Q ss_conf             1347899998630244433321000258-543
Q gi|254780628|r  154 ASEAIAAIHLARNIFPRMSFDLIYALPK-QTM  184 (395)
Q Consensus       154 ~~~~~~~~~~~~~~~~~v~iDli~GlPg-qt~  184 (395)
                      ..++.+..+.+++.+.-+-+|==++-|- |.+
T Consensus       149 v~Di~~i~~iA~~~g~~~vVDnT~atP~~~~P  180 (380)
T d1ibja_         149 ISDIRKISEMAHAQGALVLVDNSIMSPVLSRP  180 (380)
T ss_dssp             CCCHHHHHHHHHTTTCEEEEECTTTCTTTCCG
T ss_pred             CCCHHHHHHHHHHCCCEEEEECCCCCCCCCCC
T ss_conf             44589999999875980896243004300255


No 107
>d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]}
Probab=46.76  E-value=7.6  Score=16.10  Aligned_cols=30  Identities=10%  Similarity=-0.106  Sum_probs=13.0

Q ss_pred             HHHHHHHHHHHC-CCCCCCCCCCCCCC-CCCC
Q ss_conf             347899998630-24443332100025-8543
Q gi|254780628|r  155 SEAIAAIHLARN-IFPRMSFDLIYALP-KQTM  184 (395)
Q Consensus       155 ~~~~~~~~~~~~-~~~~v~iDli~GlP-gqt~  184 (395)
                      .++.+.++.+++ .+.-+-+|==+.-| .|.+
T Consensus       161 ~Di~~~~~~~~~~~g~~vvvDnT~atP~~~~P  192 (394)
T d1e5ea_         161 IDMERVCKDAHSQEGVLVIADNTFCSPMITNP  192 (394)
T ss_dssp             CCHHHHHHHHHTSTTCEEEEECTTTCTTTCCG
T ss_pred             EHHHHHHHCCCCCCCEEEEECCCCCCCCCCCC
T ss_conf             12444420132456708873376547645784


No 108
>d2choa2 c.1.8.10 (A:127-436) Glucosaminidase GH84, catalytic domain {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=45.88  E-value=6.1  Score=16.75  Aligned_cols=22  Identities=14%  Similarity=0.324  Sum_probs=14.6

Q ss_pred             HHHHHHHHHCCCCCEEEECCCC
Q ss_conf             2347766303454114323433
Q gi|254780628|r  119 VNNFQGYRKAGVNRISLGVQSL  140 (395)
Q Consensus       119 ~~~l~~l~~~Gv~RiS~GvQs~  140 (395)
                      ..|+..+.+.||+-++|=.-..
T Consensus        97 ~~K~~ql~~~Gv~~failfDDI  118 (310)
T d2choa2          97 LAKFEKMYQLGVRSFAVFFDDI  118 (310)
T ss_dssp             HHHHHHHHHTTCCEEEEECCSC
T ss_pred             HHHHHHHHHCCCCEEEEEECCC
T ss_conf             9999999976987799850235


No 109
>d1xxxa1 c.1.10.1 (A:5-300) Dihydrodipicolinate synthase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=44.29  E-value=8.3  Score=15.85  Aligned_cols=133  Identities=9%  Similarity=0.111  Sum_probs=71.8

Q ss_pred             HHHHHHHHHHHHHHHCCCEEEEEEECCCC--CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCC-CHHHHHHHHHH
Q ss_conf             99999999999876189505899962888--8878999999999766404764443321133-21041-00234776630
Q gi|254780628|r   52 IQSFLTEMQWMRQLTGPRSISSIFFGGGT--PSLIEPQNIALILDGIAKNWTVSSNVEITIE-ANPSS-VEVNNFQGYRK  127 (395)
Q Consensus        52 ~~~l~~Ei~~~~~~~~~~~~~~iy~GGGT--Ps~l~~~~l~~ll~~i~~~~~~~~~~e~t~E-~~P~~-~~~~~l~~l~~  127 (395)
                      .+++.+.++.+...  |  +..++++|.|  -..|+.++-.++++.+.+...  ....+-.- +.+++ -+.+..+...+
T Consensus        27 ~~~l~~~i~~li~~--G--v~Gi~v~G~tGE~~~Ls~eEr~~l~~~~~~~~~--~~~~vi~g~~~~s~~~~i~~a~~a~~  100 (296)
T d1xxxa1          27 TATAARLANHLVDQ--G--CDGLVVSGTTGESPTTTDGEKIELLRAVLEAVG--DRARVIAGAGTYDTAHSIRLAKACAA  100 (296)
T ss_dssp             HHHHHHHHHHHHHT--T--CSEEEESSTTTTTTTSCHHHHHHHHHHHHHHHT--TTSEEEEECCCSCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHC--C--CCEEEECEECCCHHHCCHHHHHHHHHHHHHHHC--CCCCEEECCCCCHHHHHHHHHHHHHH
T ss_conf             99999999999976--9--998997855645434899999999989999844--56624740565106789999888787


Q ss_pred             CCCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCE
Q ss_conf             345411432343320134554224431347899998630244433321000258543221112788753180012
Q gi|254780628|r  128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHL  202 (395)
Q Consensus       128 ~Gv~RiS~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli~GlPgqt~e~~~~~l~~~~~l~p~~i  202 (395)
                      .|++-+-+..-.+.         ..+.+++.+-++.+-++- ++.+ ++|..|+-|--.+..++-..+. ..++|
T Consensus       101 ~Gad~v~i~~P~~~---------~~~~~~l~~~~~~v~~~~-~~pi-~lYn~p~~~g~~~~~~~~~~L~-~~p~i  163 (296)
T d1xxxa1         101 EGAHGLLVVTPYYS---------KPPQRGLQAHFTAVADAT-ELPM-LLYDIPGRSAVPIEPDTIRALA-SHPNI  163 (296)
T ss_dssp             HTCSEEEEECCCSS---------CCCHHHHHHHHHHHHTTC-SSCE-EEEECHHHHSSCCCHHHHHHHH-TSTTE
T ss_pred             HCCCEEEEEECCCC---------CCCHHHHHHHHHHHHHHC-CCCE-EEEECCCCCCCCCCHHHHHHHC-CCCCE
T ss_conf             33784999725678---------989999999999999725-9978-9997864247777788999855-79996


No 110
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]}
Probab=43.68  E-value=6.4  Score=16.59  Aligned_cols=28  Identities=11%  Similarity=0.005  Sum_probs=18.6

Q ss_pred             CCHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             3134789999863024443332100025
Q gi|254780628|r  153 NASEAIAAIHLARNIFPRMSFDLIYALP  180 (395)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~v~iDli~GlP  180 (395)
                      +.+++.+.++.+++.+..|=+|++++--
T Consensus        73 t~~df~~LV~~aH~~GI~VilDvV~NH~  100 (378)
T d1jaea2          73 DESAFTDMTRRCNDAGVRIYVDAVINHM  100 (378)
T ss_dssp             EHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred             CHHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf             9999999999998567244564034421


No 111
>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]}
Probab=42.64  E-value=2.9  Score=18.90  Aligned_cols=17  Identities=24%  Similarity=0.485  Sum_probs=9.0

Q ss_pred             HHHHHHHHCCCCCEEEEC
Q ss_conf             347766303454114323
Q gi|254780628|r  120 NNFQGYRKAGVNRISLGV  137 (395)
Q Consensus       120 ~~l~~l~~~Gv~RiS~Gv  137 (395)
                      +.|+.++..|+ .+-+||
T Consensus        38 ~vL~A~~~tgi-~v~lGv   54 (312)
T d2cyga1          38 AALQALRNSNI-QVLLDV   54 (312)
T ss_dssp             HHHHHHTTSCC-EEEEEE
T ss_pred             HHHHHHHHCCC-EEEEEE
T ss_conf             99998886499-899960


No 112
>d1twia2 c.1.6.1 (A:50-313) Diaminopimelate decarboxylase LysA {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=42.33  E-value=8.9  Score=15.66  Aligned_cols=14  Identities=7%  Similarity=0.233  Sum_probs=5.5

Q ss_pred             CCEEEEEEEEECCC
Q ss_conf             01234646882596
Q gi|254780628|r  200 DHLSLYQLTIEKGT  213 (395)
Q Consensus       200 ~~is~Y~l~i~~~t  213 (395)
                      +++.+..+..+-|+
T Consensus       165 ~~l~~~GlH~H~gS  178 (264)
T d1twia2         165 EYVNVVGVHCHIGS  178 (264)
T ss_dssp             SSEEEEEEECCCCS
T ss_pred             CCCCCCCCEEEEHH
T ss_conf             13443440232010


No 113
>d2d1ha1 a.4.5.50 (A:1-109) Hypothetical transcriptional regulator ST1889 {Sulfolobus tokodaii [TaxId: 111955]}
Probab=41.94  E-value=9  Score=15.62  Aligned_cols=71  Identities=8%  Similarity=0.138  Sum_probs=45.3

Q ss_pred             ECCHHHHHHHHHHHHHH-HCCCCCHHHHHHHHCCCHH--HHHHHHHHHCCCEEEEECC------EEEECHHHHHHHHHHH
Q ss_conf             54999989999999656-2379988899988389964--9999999987994985598------9999567589899999
Q gi|254780628|r  320 FLSSEQQADEFLMMGLR-LREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS------RLRCTQRGMTMLDSVI  390 (395)
Q Consensus       320 ~Ls~~e~~~e~l~~~LR-~~~Gid~~~~~~~fg~~~~--~~~~~~L~~~Gli~~~~~~------~l~lT~~G~~~~d~I~  390 (395)
                      -||+.+.   .++..|. ...+++.+++.+..|.+-.  ...++.|++.|||.+..+.      .+.+|..|.-+...+.
T Consensus        18 gLs~~~~---~iL~~L~~~~~~~t~~eLa~~~~i~~~tvs~~l~~L~~~GlV~r~~~~~d~rg~~~~~~~~~~~~~~~i~   94 (109)
T d2d1ha1          18 KITDTDV---AVLLKMVEIEKPITSEELADIFKLSKTTVENSLKKLIELGLVVRTKTEGKKIGRPKYYYSISSNILEKIR   94 (109)
T ss_dssp             TCCHHHH---HHHHHHHHHCSCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEC-------CCEEEEECTTHHHHHH
T ss_pred             CCCHHHH---HHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEECCHHHHHHHH
T ss_conf             9599999---9999999769898899999998856769999999999789979852688898626888407899999999


Q ss_pred             HHH
Q ss_conf             986
Q gi|254780628|r  391 ANL  393 (395)
Q Consensus       391 ~~l  393 (395)
                      .++
T Consensus        95 ~~~   97 (109)
T d2d1ha1          95 NDL   97 (109)
T ss_dssp             HHH
T ss_pred             HHH
T ss_conf             999


No 114
>d1lvaa4 a.4.5.35 (A:575-634) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=40.70  E-value=9.4  Score=15.50  Aligned_cols=48  Identities=15%  Similarity=0.128  Sum_probs=36.4

Q ss_pred             HHHHHHHCCCCCHHHHHHHHCCC--HHHHHHHHHHHCCCEEEEECCEEEE
Q ss_conf             99965623799888999883899--6499999999879949855989999
Q gi|254780628|r  331 LMMGLRLREGISVKDWEMLAGRN--LDIECERNLQRQGFIERVQFSRLRC  378 (395)
Q Consensus       331 l~~~LR~~~Gid~~~~~~~fg~~--~~~~~~~~L~~~Gli~~~~~~~l~l  378 (395)
                      ++..+....+++++.|++.+|.+  +..++++.|-+.|+..+.++.|+.+
T Consensus         9 ~i~~l~~~g~~~v~~frd~~g~sRK~ai~lLE~~D~~~~T~R~gd~Rvl~   58 (60)
T d1lvaa4           9 VIKNLASTGPFGLAEARDALGSSRKYVLPLLEYLDQVKFTRRVGDKRVVV   58 (60)
T ss_dssp             HHHHHHTTSCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTEEEEC
T ss_pred             HHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCEEEEC
T ss_conf             99987766988399999997851989999999986449857629997725


No 115
>d2esha1 a.4.5.61 (A:4-117) Hypothetical protein TM0937 {Thermotoga maritima [TaxId: 2336]}
Probab=40.00  E-value=9.6  Score=15.43  Aligned_cols=39  Identities=23%  Similarity=0.348  Sum_probs=28.2

Q ss_pred             HHHHHHHHHHCCCEEEE---ECC----EEEECHHHHHHHHHHHHHH
Q ss_conf             49999999987994985---598----9999567589899999986
Q gi|254780628|r  355 DIECERNLQRQGFIERV---QFS----RLRCTQRGMTMLDSVIANL  393 (395)
Q Consensus       355 ~~~~~~~L~~~Gli~~~---~~~----~l~lT~~G~~~~d~I~~~l  393 (395)
                      ..+.+..|+++|||+..   .++    .+.+|++|+..++..+.++
T Consensus        49 iY~~L~rLe~~G~I~~~~~~~~g~~rk~Y~IT~~G~~~l~~~~~~~   94 (114)
T d2esha1          49 IYRVLADLEESGFLSTEWDTTVSPPRKIYRITPQGKLYLREILRSL   94 (114)
T ss_dssp             HHHHHHHHHHTTSEEEEEECSSSSCEEEEEECHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCEEEEEECCCCCCCEEEEECHHHHHHHHHHHHHH
T ss_conf             7999999998898499852378988679998988999999999999


No 116
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]}
Probab=39.96  E-value=8.4  Score=15.80  Aligned_cols=15  Identities=0%  Similarity=0.171  Sum_probs=9.8

Q ss_pred             CHHHHHHHHHHHHHC
Q ss_conf             999999999766404
Q gi|254780628|r   85 EPQNIALILDGIAKN   99 (395)
Q Consensus        85 ~~~~l~~ll~~i~~~   99 (395)
                      +.++++++++.+++.
T Consensus        80 ~~~dlk~lv~~~H~~   94 (409)
T d1wzaa2          80 TLEDFHKLVEAAHQR   94 (409)
T ss_dssp             CHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHC
T ss_conf             999999999999866


No 117
>d2c5sa2 d.308.1.1 (A:3-173) Thiamine biosynthesis protein ThiI, N-terminal domain {Bacillus anthracis [TaxId: 1392]}
Probab=39.85  E-value=9.7  Score=15.41  Aligned_cols=118  Identities=4%  Similarity=0.106  Sum_probs=61.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCEEE----EEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC-CCCCCCCCCHHH
Q ss_conf             628899999999999998761895058----999628888878999999999766404764443321-133210410023
Q gi|254780628|r   46 VGQENFIQSFLTEMQWMRQLTGPRSIS----SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEI-TIEANPSSVEVN  120 (395)
Q Consensus        46 ~~~~~y~~~l~~Ei~~~~~~~~~~~~~----~iy~GGGTPs~l~~~~l~~ll~~i~~~~~~~~~~e~-t~E~~P~~~~~~  120 (395)
                      .++..+.+.|.+-|+......++..+.    .+++-      ++.+...++.+.++..|++..-..+ .++.+.+.+.+.
T Consensus        16 knR~~Fe~~L~~Nik~~L~~~~~~~v~~~~~r~~v~------~~~~~~~~v~e~L~~vfGI~~~s~~~~~~~dle~I~~~   89 (171)
T d2c5sa2          16 KNRSKFVSTLKDNVKFKLKKFPNIKIDATHDRMYIQ------LNGEDHEAVSERLKDVFGIHKFNLAMKVPSELEDIKKG   89 (171)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSTTCEEEECSSCEEEE------CTTCCHHHHHHHHTTCTTEEEEEEEEEEESSHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHCCCEEEEEEECEEEEE------ECCCCHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHH
T ss_conf             489999999999999999748985899980799999------56779899999970688713899999958998999999


Q ss_pred             HHHHHHHCCCCCEEEECCCCCCHHHHHHHCC--CCCHHHHHHHH-HHHCCCCCCCCCC
Q ss_conf             4776630345411432343320134554224--43134789999-8630244433321
Q gi|254780628|r  121 NFQGYRKAGVNRISLGVQSLEEQSLRFLGRN--HNASEAIAAIH-LARNIFPRMSFDL  175 (395)
Q Consensus       121 ~l~~l~~~Gv~RiS~GvQs~~~~~l~~~~R~--~~~~~~~~~~~-~~~~~~~~v~iDl  175 (395)
                      -++.+.+.--..-||.|..      +..+..  .+..++.+.+. .+.+.+....+||
T Consensus        90 a~~~~~~~~~~~~tF~Vr~------kR~~k~f~~tS~ei~~~lG~~il~~~~~~kVdL  141 (171)
T d2c5sa2          90 ALAAFLQVKGDVKTFKITV------HRSYKHFPMRTMELLPEIGGHILENTEDITVDV  141 (171)
T ss_dssp             HHHHHHTCCSCCCEEEEEE------EECCTTCSSCHHHHHHHHHHHHHTTSSSCEECS
T ss_pred             HHHHHHHHCCCCCEEEEEE------EECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEC
T ss_conf             9999987426896499999------977888998988999999999997689986466


No 118
>d1ur3m_ c.1.7.1 (M:) Hypothetical oxidoreductase YdhF {Escherichia coli [TaxId: 562]}
Probab=39.42  E-value=9.8  Score=15.37  Aligned_cols=61  Identities=15%  Similarity=0.145  Sum_probs=31.3

Q ss_pred             CCCCCCCCCCCHHHHHH-CCCCCEEEEEEEEECCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC-CCCCCHH
Q ss_conf             58543221112788753-180012346468825960001454498021103567889998655788709624-2367434
Q gi|254780628|r  180 PKQTMTQWEMELQRALS-YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA-YEISNHS  257 (395)
Q Consensus       180 Pgqt~e~~~~~l~~~~~-l~p~~is~Y~l~i~~~t~l~~~~~~~~~~~p~~~~~~~~~~~a~e~L~~~GY~~-Yeis~fa  257 (395)
                      +.-+.+.+++.++.-++ |+.|+|.+|-+--. +           ...|.++    .+ .+.+.|++.|-.+ +.+|+|.
T Consensus        99 ~~~s~~~i~~~~~~SL~rL~~d~iDl~~lH~~-d-----------~~~~~~e----~~-~~l~~lk~~GkIr~iG~S~~~  161 (298)
T d1ur3m_          99 YITDRDHIIKSAEQSLINLATDHLDLLLIHRP-D-----------PLMDADE----VA-DAFKHLHQSGKVRHFGVSNFT  161 (298)
T ss_dssp             ECCCHHHHHHHHHHHHHHHTCSCBSEEEECSC-C-----------TTCCHHH----HH-HHHHHHHHTTSBCCEEEESCC
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC-C-----------CCCHHHH----HH-HHHHHHHCCCCCEEECCCCCC
T ss_conf             78999999988885331110364322222222-2-----------2311588----99-999986326851130678986


No 119
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]}
Probab=38.82  E-value=10  Score=15.31  Aligned_cols=58  Identities=17%  Similarity=0.001  Sum_probs=24.7

Q ss_pred             HHHHHHHHHCCCC--CEEEECCCCCCHHHHHHHCC--CCCHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             2347766303454--11432343320134554224--4313478999986302444333210
Q gi|254780628|r  119 VNNFQGYRKAGVN--RISLGVQSLEEQSLRFLGRN--HNASEAIAAIHLARNIFPRMSFDLI  176 (395)
Q Consensus       119 ~~~l~~l~~~Gv~--RiS~GvQs~~~~~l~~~~R~--~~~~~~~~~~~~~~~~~~~v~iDli  176 (395)
                      ++.|+.+|++|+|  |+.++.....+..-..-|..  .....+.+.++.+.+.+..|-+||.
T Consensus        42 ~~~l~~~k~~G~N~vR~~~~~~~~~~~~~~~~g~~~~~~l~~ld~~l~~a~~~Gi~vi~~l~  103 (370)
T d1rh9a1          42 TNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYGIHLIMSLV  103 (370)
T ss_dssp             HHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred             HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECC
T ss_conf             99999999879919997985676676567888754678899999999999986999999624


No 120
>d1yx1a1 c.1.15.7 (A:3-252) Hypothetical protein PA2260 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=38.74  E-value=10  Score=15.30  Aligned_cols=20  Identities=25%  Similarity=0.242  Sum_probs=7.2

Q ss_pred             CCCCCCCHHHHHHCCCCCEE
Q ss_conf             32211127887531800123
Q gi|254780628|r  184 MTQWEMELQRALSYAVDHLS  203 (395)
Q Consensus       184 ~e~~~~~l~~~~~l~p~~is  203 (395)
                      .+.+++-++.+.+++.++|.
T Consensus        79 ~~~~~~~i~~A~~LG~~~v~   98 (250)
T d1yx1a1          79 NPELEPTLRRAEACGAGWLK   98 (250)
T ss_dssp             CTTHHHHHHHHHHTTCSEEE
T ss_pred             HHHHHHHHHHHHHHCCCEEE
T ss_conf             89999999999973799799


No 121
>d1m5wa_ c.1.24.1 (A:) Pyridoxine 5'-phosphate synthase {Escherichia coli [TaxId: 562]}
Probab=38.69  E-value=10  Score=15.29  Aligned_cols=59  Identities=17%  Similarity=0.097  Sum_probs=23.6

Q ss_pred             CHHHHHHCCCCCEEEEEEEEECCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
Q ss_conf             27887531800123464688259600014544980211035678899986557887096242367434310
Q gi|254780628|r  190 ELQRALSYAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLG  260 (395)
Q Consensus       190 ~l~~~~~l~p~~is~Y~l~i~~~t~l~~~~~~~~~~~p~~~~~~~~~~~a~e~L~~~GY~~Yeis~fak~~  260 (395)
                      -++.+.+.+|+++++=|   +.  + ...-..+++....   ......-+.+.|++.|-   .+|-|-=|+
T Consensus        78 ~i~ia~~~kP~qvtLVP---e~--r-~elTTegGld~~~---~~~~L~~~i~~l~~~gi---rvSLFiDpd  136 (242)
T d1m5wa_          78 MLAIAVETKPHFCCLVP---EK--R-QEVTTEGGLDVAG---QRDKMRDACKRLADAGI---QVSLFIDAD  136 (242)
T ss_dssp             HHHHHHHHCCSEEEECC---CC--S-SCSSCCSCCCSGG---GHHHHHHHHHHHHHTTC---EEEEEECSC
T ss_pred             HHHHHHHHCCCEEEEEE---CC--C-CCCCCCCCEEEHH---HHHHHHHHHHHHHHCCC---EEEEEECCC
T ss_conf             89999871632278862---57--5-5557677552021---58899999999986697---079994452


No 122
>d2cbia2 c.1.8.10 (A:179-495) Hyaluronidase catalytic domain {Clostridium perfringens [TaxId: 1502]}
Probab=36.90  E-value=11  Score=15.11  Aligned_cols=22  Identities=9%  Similarity=0.226  Sum_probs=14.1

Q ss_pred             HHHHHHHHHCCCCCEEEECCCC
Q ss_conf             2347766303454114323433
Q gi|254780628|r  119 VNNFQGYRKAGVNRISLGVQSL  140 (395)
Q Consensus       119 ~~~l~~l~~~Gv~RiS~GvQs~  140 (395)
                      ..|++.+.+.||+-++|=.-..
T Consensus       100 ~~K~~ql~~~Gvr~faIlfDDI  121 (317)
T d2cbia2         100 ITKAESLYDMGVRSFAIYWDDI  121 (317)
T ss_dssp             HHHHHHHHTTTCCEEEEECTTC
T ss_pred             HHHHHHHHHCCCCEEEEECCCC
T ss_conf             9999999976988799851445


No 123
>d2fi0a1 a.248.1.1 (A:3-81) Hypothetical protein SPr0485/SP0561 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=36.15  E-value=11  Score=15.04  Aligned_cols=34  Identities=9%  Similarity=0.078  Sum_probs=24.7

Q ss_pred             HHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCHHHH
Q ss_conf             2347766303454114323433201345542244313478
Q gi|254780628|r  119 VNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAI  158 (395)
Q Consensus       119 ~~~l~~l~~~Gv~RiS~GvQs~~~~~l~~~~R~~~~~~~~  158 (395)
                      ++.+..|.+.||..+      -++..++.+||.-|.+++.
T Consensus        21 Pe~~~il~~~GF~~l------~nP~ml~t~gr~~TL~~aa   54 (79)
T d2fi0a1          21 PEVLEILVELGFKPL------ANPLMRNTVGRKVSLKQGS   54 (79)
T ss_dssp             GGGHHHHTTTTCGGG------GSHHHHTTHHHHCBHHHHH
T ss_pred             HHHHHHHHHCCCHHH------CCHHHHHHHHHHCCHHHHH
T ss_conf             489999998692520------8979999786672399999


No 124
>d1s2wa_ c.1.12.7 (A:) Phosphoenolpyruvate mutase {Blue mussel (Mytilus edulis) [TaxId: 6550]}
Probab=35.59  E-value=11  Score=14.98  Aligned_cols=67  Identities=10%  Similarity=0.061  Sum_probs=36.2

Q ss_pred             CCCHHHHHHHHHHHHHCCC--CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCC
Q ss_conf             7899999999976640476--44433211332104100234776630345411432343320134554224
Q gi|254780628|r   83 LIEPQNIALILDGIAKNWT--VSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRN  151 (395)
Q Consensus        83 ~l~~~~l~~ll~~i~~~~~--~~~~~e~t~E~~P~~~~~~~l~~l~~~Gv~RiS~GvQs~~~~~l~~~~R~  151 (395)
                      +++.+++...+..|.+..+  +.-|.|--+ ++|..+ ...++.+-+.|+-=|.|.=|.+..+--...|+.
T Consensus        58 ~lt~~e~~~~~~~I~~~~~lPv~~D~d~Gy-G~~~~v-~~tv~~~~~aGaagi~iEDq~~pk~~~~~~~~~  126 (275)
T d1s2wa_          58 EASWTQVVEVLEFMSDASDVPILLDADTGY-GNFNNA-RRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRA  126 (275)
T ss_dssp             ---CHHHHHHHHHHHHTCSSCEEEECCSSC-SSHHHH-HHHHHHHHHTTCCEEEEECBCC--------CTT
T ss_pred             CCCHHHHHHHHHHHHCCCCCCEEEECCCCC-CCCHHH-HHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCC
T ss_conf             653006899998663036775157316564-540279-999999997204345751211354454223654


No 125
>d1m0sa1 c.124.1.4 (A:1-126,A:199-219) D-ribose-5-phosphate isomerase (RpiA), catalytic domain {Haemophilus influenzae [TaxId: 727]}
Probab=34.94  E-value=6.2  Score=16.67  Aligned_cols=30  Identities=17%  Similarity=0.141  Sum_probs=17.4

Q ss_pred             HHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf             761895058999628888878999999999766404
Q gi|254780628|r   64 QLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKN   99 (395)
Q Consensus        64 ~~~~~~~~~~iy~GGGTPs~l~~~~l~~ll~~i~~~   99 (395)
                      +++.  +=++|++|+||-+    ..+.+.+...+..
T Consensus        16 ~lI~--dg~~I~LdsGTT~----~~la~~L~~~~~~   45 (147)
T d1m0sa1          16 QYVK--ADRIVGVGSGSTV----NCFIEALGTIKDK   45 (147)
T ss_dssp             GGCC--TTSEEEECCSHHH----HHHHHHHHTTGGG
T ss_pred             HHCC--CCCEEEECCCHHH----HHHHHHHHHHCCC
T ss_conf             7689--9999998886369----9999998751564


No 126
>d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]}
Probab=34.00  E-value=6  Score=16.79  Aligned_cols=25  Identities=16%  Similarity=0.162  Sum_probs=9.8

Q ss_pred             HHHHHHHHHHCC--CCCCCCCCCCCCC
Q ss_conf             478999986302--4443332100025
Q gi|254780628|r  156 EAIAAIHLARNI--FPRMSFDLIYALP  180 (395)
Q Consensus       156 ~~~~~~~~~~~~--~~~v~iDli~GlP  180 (395)
                      ++.+..+.+++.  +.-+-||==++-|
T Consensus       161 Di~~i~~~a~~~~~g~~~vVDnT~atP  187 (391)
T d1cl1a_         161 DVPAIVAAVRSVVPDAIIMIDNTWAAG  187 (391)
T ss_dssp             CHHHHHHHHHHHCTTCEEEEECTTTTT
T ss_pred             CCHHHHHHHHHCCCCCEEEEECCCCCH
T ss_conf             327899988741578279985343323


No 127
>d1tz9a_ c.1.15.6 (A:) Mannonate dehydratase UxuA {Enterococcus faecalis (Streptococcus faecalis) [TaxId: 1351]}
Probab=33.92  E-value=12  Score=14.80  Aligned_cols=17  Identities=6%  Similarity=0.454  Sum_probs=7.3

Q ss_pred             HHHHHHHHHHHHHHHHH
Q ss_conf             88999999999999987
Q gi|254780628|r   48 QENFIQSFLTEMQWMRQ   64 (395)
Q Consensus        48 ~~~y~~~l~~Ei~~~~~   64 (395)
                      .+.|++...+=|+.+++
T Consensus        80 ~~~~Ien~~~slrnla~   96 (353)
T d1tz9a_          80 RDHYIDNYRQTLRNLGK   96 (353)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH
T ss_conf             99999999999999997


No 128
>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]}
Probab=33.73  E-value=12  Score=14.78  Aligned_cols=129  Identities=11%  Similarity=-0.053  Sum_probs=62.2

Q ss_pred             CCCHHHHHHHHHHCCCCCEE--EECCCCCCHHHHH------HH----CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             41002347766303454114--3234332013455------42----244313478999986302444333210002585
Q gi|254780628|r  115 SSVEVNNFQGYRKAGVNRIS--LGVQSLEEQSLRF------LG----RNHNASEAIAAIHLARNIFPRMSFDLIYALPKQ  182 (395)
Q Consensus       115 ~~~~~~~l~~l~~~Gv~RiS--~GvQs~~~~~l~~------~~----R~~~~~~~~~~~~~~~~~~~~v~iDli~GlPgq  182 (395)
                      ..-.++.++.+++.|+|-|-  ++-+.+.+.....      .+    .....+.+.++++.+++.+..|-+||--.-+++
T Consensus        43 ~~~~~~~~~~i~~~G~N~VRlpv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gl~Vildlh~~~~~~  122 (358)
T d1ecea_          43 SRDYRSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPDCSG  122 (358)
T ss_dssp             TSCHHHHHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEEESBTTB
T ss_pred             CCHHHHHHHHHHHCCCCEEEECCCHHHCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
T ss_conf             24799999999976998899347688746877777755333681110116999999999999978990664013566668


Q ss_pred             ----------CCCCCCCCHHHHHHC-C-CCCEEEEEEEEECCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             ----------432211127887531-8-001234646882596000145449802110356788999865578870962
Q gi|254780628|r  183 ----------TMTQWEMELQRALSY-A-VDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLH  249 (395)
Q Consensus       183 ----------t~e~~~~~l~~~~~l-~-p~~is~Y~l~i~~~t~l~~~~~~~~~~~p~~~~~~~~~~~a~e~L~~~GY~  249 (395)
                                ..+.+...++.+.+- + -+.|-.|.+.-||..+...     ... .......++++.+.+..++.+=.
T Consensus       123 ~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~v~~~el~NEP~~~~~~-----~~~-~~~~~~~~~~~~~~~~Ir~~d~~  195 (358)
T d1ecea_         123 QSALWYTSSVSEATWISDLQALAQRYKGNPTVVGFDLHNEPHDPACW-----GCG-DPSIDWRLAAERAGNAVLSVNPN  195 (358)
T ss_dssp             CCSSSCCSSSCHHHHHHHHHHHHHHTTTCTTEEEEECSSCCCTTCBS-----SCC-CTTTBHHHHHHHHHHHHHHHCTT
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC-----CCC-CHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             88655688277999999999998864476536755320334567767-----754-13455899999999999850899


No 129
>d1yqea1 c.56.7.1 (A:1-278) Hypothetical protein AF0625 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=32.29  E-value=13  Score=14.63  Aligned_cols=29  Identities=17%  Similarity=0.242  Sum_probs=14.1

Q ss_pred             CCHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             89999999997664047644433211332
Q gi|254780628|r   84 IEPQNIALILDGIAKNWTVSSNVEITIEA  112 (395)
Q Consensus        84 l~~~~l~~ll~~i~~~~~~~~~~e~t~E~  112 (395)
                      -+|.-+..++..+.+.....++-++|+|+
T Consensus       108 ~~P~~~~~~l~~l~~~~~~~~~f~vt~Ea  136 (278)
T d1yqea1         108 PSPQTMKNYVLALRERLDRKPEFEFTMEV  136 (278)
T ss_dssp             BCHHHHHHHHHHHHTTGGGSTTCEEEECC
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCCEEEEEE
T ss_conf             88279999999999852457774589998


No 130
>d1lbqa_ c.92.1.1 (A:) Ferrochelatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=31.98  E-value=11  Score=15.06  Aligned_cols=117  Identities=15%  Similarity=0.187  Sum_probs=52.9

Q ss_pred             ECCCCCCC-CCHHHHHHHHHHHHHCCCCCCCCC--CCCC-CCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCC
Q ss_conf             62888887-899999999976640476444332--1133-2104100234776630345411432343320134554224
Q gi|254780628|r   76 FGGGTPSL-IEPQNIALILDGIAKNWTVSSNVE--ITIE-ANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRN  151 (395)
Q Consensus        76 ~GGGTPs~-l~~~~l~~ll~~i~~~~~~~~~~e--~t~E-~~P~~~~~~~l~~l~~~Gv~RiS~GvQs~~~~~l~~~~R~  151 (395)
                      +|||+|-. .+..+.+.|-+.+.+..+-....+  +.+- ++|.  -++.|+.|++.||++|-+=...  +..-.. .-.
T Consensus        63 IgggSPL~~~t~~qa~~l~~~L~~~~~~~~~~~V~~amry~~P~--i~~~l~~l~~~G~~~ilvlPly--PqyS~s-Tt~  137 (356)
T d1lbqa_          63 IGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPL--TAETYKQMLKDGVKKAVAFSQY--PHFSYS-TTG  137 (356)
T ss_dssp             TTSSCSHHHHHHHHHHHHHHHHHHHCGGGCCEEEEEEESSSSSC--HHHHHHHHHTTTCCEEEEEESC--SSCCTT-THH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC--HHHHHHHHHHCCCCCEEEEECC--HHHHHH-HHH
T ss_conf             18988108999998999998850233435772168873146320--8889999985798643788442--344278-888


Q ss_pred             CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC--CCCCCCCHHHHHHCC
Q ss_conf             43134789999863024443332100025854--322111278875318
Q gi|254780628|r  152 HNASEAIAAIHLARNIFPRMSFDLIYALPKQT--MTQWEMELQRALSYA  198 (395)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~v~iDli~GlPgqt--~e~~~~~l~~~~~l~  198 (395)
                      ...+++.+++...+. ...+.++.|-.+...-  .+.+.+.++..++-.
T Consensus       138 s~~~~v~~~l~~~~~-~~~~~~~~I~~~~~~p~yI~a~a~~i~~~l~~~  185 (356)
T d1lbqa_         138 SSINELWRQIKALDS-ERSISWSVIDRWPTNEGLIKAFSENITKKLQEF  185 (356)
T ss_dssp             HHHHHHHHHHHHHCT-TCCSEEEEECCCTTCHHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHH-HCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf             999999999887501-025664264464431227999999999999976


No 131
>d1li4a2 c.23.12.3 (A:3-189,A:353-432) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.86  E-value=13  Score=14.59  Aligned_cols=22  Identities=18%  Similarity=0.324  Sum_probs=10.2

Q ss_pred             CCCCCCCCCCCCCCHHHHHHCC
Q ss_conf             0025854322111278875318
Q gi|254780628|r  177 YALPKQTMTQWEMELQRALSYA  198 (395)
Q Consensus       177 ~GlPgqt~e~~~~~l~~~~~l~  198 (395)
                      |+.-|+|.+.+...++.++++.
T Consensus        98 fA~~g~~~eey~~~~~~~L~~~  119 (267)
T d1li4a2          98 YAWKGETDEEYLWCIEQTLYFK  119 (267)
T ss_dssp             EECTTCCHHHHHHHHHTTTEET
T ss_pred             EEECCCCHHHHHHHHHHHHHCC
T ss_conf             8756999889999999998533


No 132
>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=31.13  E-value=11  Score=15.06  Aligned_cols=11  Identities=9%  Similarity=0.205  Sum_probs=5.0

Q ss_pred             HHHHHHHHHHH
Q ss_conf             34789999863
Q gi|254780628|r  155 SEAIAAIHLAR  165 (395)
Q Consensus       155 ~~~~~~~~~~~  165 (395)
                      .++....+.++
T Consensus       155 ~Di~~ia~~a~  165 (393)
T d1n8pa_         155 TDIQKVADLIK  165 (393)
T ss_dssp             CCHHHHHHHHH
T ss_pred             CCHHHHHHHHH
T ss_conf             20355554444


No 133
>d1t0ia_ c.23.5.4 (A:) Hypothetical protein Ylr011wp {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=30.07  E-value=14  Score=14.39  Aligned_cols=65  Identities=9%  Similarity=0.090  Sum_probs=27.0

Q ss_pred             ECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCE-EEEEEECCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf             40651183765773024578866288999999999999987618950-589996288888789999999997664047
Q gi|254780628|r   24 HWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRS-ISSIFFGGGTPSLIEPQNIALILDGIAKNW  100 (395)
Q Consensus        24 hiPFC~~~C~yC~f~~~~~~~~~~~~~y~~~l~~Ei~~~~~~~~~~~-~~~iy~GGGTPs~l~~~~l~~ll~~i~~~~  100 (395)
                      ++|+|..-+..|.. ........ ....+..+..++..    ..+.- ..-+|.|+      -+..|+-+++.+.+.|
T Consensus        49 ~lp~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~i~~----AD~iIi~tP~Y~~~------~~~~lK~~iD~~~~~~  114 (185)
T d1t0ia_          49 ALPLYEDDDELIPA-QIKSVDEY-ADSKTRSWSRIVNA----LDIIVFVTPQYNWG------YPAALKNAIDRLYHEW  114 (185)
T ss_dssp             CCCSSCCCCCSCGG-GCCSGGGC-SCHHHHHHHHHHHT----CSEEEEEEECBTTB------CCHHHHHHHHTCSTTT
T ss_pred             CCCCCCHHHHCCCC-CCCCCCCC-CCHHHHHHHHHHHH----CCCEEEEEEEECCC------CCHHHHHHHHHHHHHH
T ss_conf             76544534311655-45533334-87999999999983----88709997502377------9689989999745988


No 134
>d1mw9x_ e.10.1.1 (X:) DNA topoisomerase I, 67K N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=29.67  E-value=14  Score=14.35  Aligned_cols=35  Identities=17%  Similarity=0.312  Sum_probs=28.4

Q ss_pred             HHHHHHHHHCCCEEEEECCEEEECHHHHHHHHHHHH
Q ss_conf             999999998799498559899995675898999999
Q gi|254780628|r  356 IECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIA  391 (395)
Q Consensus       356 ~~~~~~L~~~Gli~~~~~~~l~lT~~G~~~~d~I~~  391 (395)
                      ...++.|.++|+|+ .++..+.+|+.|+.+++.+-.
T Consensus       497 a~iIe~L~~R~Yi~-~~~k~l~pT~~G~~li~~l~~  531 (591)
T d1mw9x_         497 ASIISTIQDRGYVR-VENRRFYAEKMGEIVTDRLEE  531 (591)
T ss_dssp             HHHHHHHHHTTSEE-EETTEEEECHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCEE-ECCCEEEECHHHHHHHHHHHH
T ss_conf             99999998689899-309888564779999999987


No 135
>d1sr9a2 c.1.10.5 (A:61-370) 2-isopropylmalate synthase LeuA, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=29.63  E-value=14  Score=14.34  Aligned_cols=19  Identities=16%  Similarity=0.295  Sum_probs=8.5

Q ss_pred             CCCCCCHHHHHHHHHHHHHC
Q ss_conf             88878999999999766404
Q gi|254780628|r   80 TPSLIEPQNIALILDGIAKN   99 (395)
Q Consensus        80 TPs~l~~~~l~~ll~~i~~~   99 (395)
                      -|. .++.+...+.......
T Consensus        54 ~p~-~s~~~~~~~~~~~~~~   72 (310)
T d1sr9a2          54 FPS-ASQTDFDFVREIIEQG   72 (310)
T ss_dssp             CTT-TCHHHHHHHHHHHHTT
T ss_pred             CCC-CCHHHHHHHHHHHHHC
T ss_conf             886-7877899999999850


No 136
>d1o5ka_ c.1.10.1 (A:) Dihydrodipicolinate synthase {Thermotoga maritima [TaxId: 2336]}
Probab=29.07  E-value=14  Score=14.28  Aligned_cols=130  Identities=9%  Similarity=0.118  Sum_probs=71.9

Q ss_pred             HHHHHHHHHHHHHHCCCEEEEEEECCCC--CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC-CCCC-CHHHHHHHHHHC
Q ss_conf             9999999999876189505899962888--88789999999997664047644433211332-1041-002347766303
Q gi|254780628|r   53 QSFLTEMQWMRQLTGPRSISSIFFGGGT--PSLIEPQNIALILDGIAKNWTVSSNVEITIEA-NPSS-VEVNNFQGYRKA  128 (395)
Q Consensus        53 ~~l~~Ei~~~~~~~~~~~~~~iy~GGGT--Ps~l~~~~l~~ll~~i~~~~~~~~~~e~t~E~-~P~~-~~~~~l~~l~~~  128 (395)
                      +++.+.++.+.+.  |  ++.|+++|.|  -..|+.++-.++++...+.-.  ....+-.-+ .+++ -..+..+...+.
T Consensus        22 ~~~~~~i~~l~~~--G--v~Gi~v~GstGE~~~Ls~~Er~~~~~~~~~~~~--~~~~vi~gv~~~st~~ai~~a~~A~~~   95 (295)
T d1o5ka_          22 ESYERLVRYQLEN--G--VNALIVLGTTGESPTVNEDEREKLVSRTLEIVD--GKIPVIVGAGTNSTEKTLKLVKQAEKL   95 (295)
T ss_dssp             HHHHHHHHHHHHT--T--CCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHT--TSSCEEEECCCSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHC--C--CCEEEECEECCCHHHCCHHHHHHHHHHHCCCCC--CCCCEEEECCCCCHHHHHHHHHHHHHC
T ss_conf             9999999999976--9--999997901534545899999998654100235--678668615654599999999999975


Q ss_pred             CCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC-CCCCCCCCCCCCCC-CCHHHHHHCCCC
Q ss_conf             4541143234332013455422443134789999863024443332-10002585432211-127887531800
Q gi|254780628|r  129 GVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFD-LIYALPKQTMTQWE-MELQRALSYAVD  200 (395)
Q Consensus       129 Gv~RiS~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iD-li~GlPgqt~e~~~-~~l~~~~~l~p~  200 (395)
                      |++-+.+....+.         ..+.+++.+-++.+-++   .++. ++|..|.-|--.+. .++..+.+-.|+
T Consensus        96 Gad~v~v~pP~y~---------~~s~~~i~~~~~~ia~a---~~~pi~iYn~P~~~g~~~~~~~~~~l~~~~~n  157 (295)
T d1o5ka_          96 GANGVLVVTPYYN---------KPTQEGLYQHYKYISER---TDLGIVVYNVPGRTGVNVLPETAARIAADLKN  157 (295)
T ss_dssp             TCSEEEEECCCSS---------CCCHHHHHHHHHHHHTT---CSSCEEEEECHHHHSCCCCHHHHHHHHHHCTT
T ss_pred             CCCEEEEECCCCC---------CCCHHHHHHHHHHHHHC---CCCCEEEEECCCHHCCCCHHHHHHHHHHHCCC
T ss_conf             9999998089899---------98999999999999853---69970687563111023026899998861246


No 137
>d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]}
Probab=28.28  E-value=15  Score=14.19  Aligned_cols=120  Identities=12%  Similarity=0.024  Sum_probs=59.4

Q ss_pred             CCCCHHHHHHHHH-HCCCC--CEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC----CCCCC
Q ss_conf             0410023477663-03454--11432343320134554224431347899998630244433321000258----54322
Q gi|254780628|r  114 PSSVEVNNFQGYR-KAGVN--RISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK----QTMTQ  186 (395)
Q Consensus       114 P~~~~~~~l~~l~-~~Gv~--RiS~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli~GlPg----qt~e~  186 (395)
                      |+..+.+.+..++ +.|+|  |+.++.+......     -..-.+.+.++++.+.+.+..|-+|+- +.++    ...+.
T Consensus        38 ~~~~~~~~~~~l~~~~G~N~VR~~~~~~~~~~~~-----~~~~~~~ld~~v~~a~~~Gl~Vild~h-~~~~~~~~~~~~~  111 (300)
T d7a3ha_          38 GQFVNYESMKWLRDDWGINVFRAAMYTSSGGYID-----DPSVKEKVKEAVEAAIDLDIYVIIDWH-ILSDNDPNIYKEE  111 (300)
T ss_dssp             GGGCSHHHHHHHHHHTCCCEEEEEEESSTTSTTT-----CTTHHHHHHHHHHHHHHHTCEEEEEEE-CSSSCSTTTTHHH
T ss_pred             CCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCC-----CHHHHHHHHHHHHHHHHCCCEEEEEEE-ECCCCCCHHHHHH
T ss_conf             6558999999999873998899931707567646-----979999999999999987998997543-4488887123999


Q ss_pred             CCCCHHHHHHC--CCCCEEEEEEEEECCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             11127887531--80012346468825960001454498021103567889998655788709624
Q gi|254780628|r  187 WEMELQRALSY--AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA  250 (395)
Q Consensus       187 ~~~~l~~~~~l--~p~~is~Y~l~i~~~t~l~~~~~~~~~~~p~~~~~~~~~~~a~e~L~~~GY~~  250 (395)
                      +..-.+.+.+-  +.+.| +|.+.-||...          .....+....+++.+.+..++.+-.+
T Consensus       112 ~~~~w~~ia~ryk~~p~V-~~el~NEP~~~----------~~~~~~~~~~~~~~~~~~IR~~dp~~  166 (300)
T d7a3ha_         112 AKDFFDEMSELYGDYPNV-IYEIANEPNGS----------DVTWGNQIKPYAEEVIPIIRNNDPNN  166 (300)
T ss_dssp             HHHHHHHHHHHHTTCTTE-EEECCSCCCST----------TCCTTTTHHHHHHHHHHHHHTTCSSS
T ss_pred             HHHHHHHHHHHHCCCCCC-EEEEECCCCCC----------CCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             999999999982899721-23300235788----------87715677999999999999618887


No 138
>d2dkya1 a.60.1.3 (A:8-85) Deleted in liver cancer 1 protein, DLC-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.71  E-value=9.6  Score=15.43  Aligned_cols=15  Identities=20%  Similarity=0.237  Sum_probs=12.4

Q ss_pred             HHHHHHHHHCCCCCC
Q ss_conf             986557887096242
Q gi|254780628|r  237 NLTQSITSAHGLHAY  251 (395)
Q Consensus       237 ~~a~e~L~~~GY~~Y  251 (395)
                      ..|.++|+++||.||
T Consensus        17 ~eAC~WLraaGFpqY   31 (78)
T d2dkya1          17 KEACDWLRATGFPQY   31 (78)
T ss_dssp             HHHHHHHHHHTCTTH
T ss_pred             HHHHHHHHHCCCHHH
T ss_conf             999999998388489


No 139
>d1c52a_ a.3.1.1 (A:) Cytochrome c552 {Thermus thermophilus [TaxId: 274]}
Probab=27.27  E-value=15  Score=14.07  Aligned_cols=40  Identities=20%  Similarity=0.370  Sum_probs=26.5

Q ss_pred             CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             789999999997664047644433211332104100234776630
Q gi|254780628|r   83 LIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRK  127 (395)
Q Consensus        83 ~l~~~~l~~ll~~i~~~~~~~~~~e~t~E~~P~~~~~~~l~~l~~  127 (395)
                      .|+.+++..|+.-|+..|+-.....     .+..++.+.++.+|.
T Consensus        74 ~LsD~eI~av~~YIr~~~gn~~~~~-----~~~~~t~~~v~~~R~  113 (131)
T d1c52a_          74 QLKDEEIAAVLNHIATAWGDAKKVK-----GFKPFTAEEVKKLRA  113 (131)
T ss_dssp             TSCHHHHHHHHHHHHHTTSTGGGST-----TCCCCCHHHHHHHTT
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCCC-----CCCCCCHHHHHHHHC
T ss_conf             7999999999999998738877666-----788889999999985


No 140
>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]}
Probab=26.91  E-value=16  Score=14.03  Aligned_cols=113  Identities=12%  Similarity=0.012  Sum_probs=49.7

Q ss_pred             HHHHHHHHHCCCCCEEEEC--CCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC--CCCC----CCCCCCCCCC
Q ss_conf             2347766303454114323--433201345542244313478999986302444333210--0025----8543221112
Q gi|254780628|r  119 VNNFQGYRKAGVNRISLGV--QSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLI--YALP----KQTMTQWEME  190 (395)
Q Consensus       119 ~~~l~~l~~~Gv~RiS~Gv--Qs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli--~GlP----gqt~e~~~~~  190 (395)
                      .+.++.+++.|+|-|-+.+  ....+        ....+.+.+.++.+.+.+..|-+|+-  .+..    ....+.+...
T Consensus        35 ~~~~~~i~~~G~N~VRl~~~~~~~~~--------~~~~~~~~~~v~~a~~~Gi~vildlh~~~~~~~~~~~~~~~~~~~~  106 (302)
T d1bqca_          35 TQAFADIKSHGANTVRVVLSNGVRWS--------KNGPSDVANVISLCKQNRLICMLEVHDTTGYGEQSGASTLDQAVDY  106 (302)
T ss_dssp             TTHHHHHHHTTCSEEEEEECCSSSSC--------CCCHHHHHHHHHHHHHTTCEEEEEEGGGTTTTTSTTCCCHHHHHHH
T ss_pred             HHHHHHHHHCCCCEEEEECCCCCCCC--------CCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHH
T ss_conf             99999999659987999461332567--------6417899999999997799999980442224678846778999999


Q ss_pred             HHHHHH-C--CCCCEEEEEEEEECCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             788753-1--80012346468825960001454498021103567889998655788709624
Q gi|254780628|r  191 LQRALS-Y--AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA  250 (395)
Q Consensus       191 l~~~~~-l--~p~~is~Y~l~i~~~t~l~~~~~~~~~~~p~~~~~~~~~~~a~e~L~~~GY~~  250 (395)
                      .+.+++ +  .|. +-.|.+.-||.-.          ..........+++.+.+..++.+..+
T Consensus       107 w~~ia~~~~~~p~-vv~~~l~NEp~~~----------~~~~~~~~~~~~~~~~~~ir~~d~~~  158 (302)
T d1bqca_         107 WIELKSVLQGEED-YVLINIGNEPYGN----------DSATVAAWATDTSAAIQRLRAAGFEH  158 (302)
T ss_dssp             HHHTHHHHTTCTT-TEEEECSSSCCCS----------CHHHHTTHHHHHHHHHHHHHHTTCCS
T ss_pred             HHHHHHHHCCCCC-EEEEECCCCCCCC----------CCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             9999998458998-7999513366688----------87524456778999999999709984


No 141
>d1f74a_ c.1.10.1 (A:) N-acetylneuraminate lyase {Haemophilus influenzae [TaxId: 727]}
Probab=26.62  E-value=16  Score=14.00  Aligned_cols=129  Identities=9%  Similarity=0.054  Sum_probs=67.9

Q ss_pred             HHHHHHHHHHHHHHHCCCEEEEEEECCCC--CCCCCHHHHHHHHHHHHHCCCCCCCCCC--CCCCCCCCCHHHHHHHHHH
Q ss_conf             99999999999876189505899962888--8878999999999766404764443321--1332104100234776630
Q gi|254780628|r   52 IQSFLTEMQWMRQLTGPRSISSIFFGGGT--PSLIEPQNIALILDGIAKNWTVSSNVEI--TIEANPSSVEVNNFQGYRK  127 (395)
Q Consensus        52 ~~~l~~Ei~~~~~~~~~~~~~~iy~GGGT--Ps~l~~~~l~~ll~~i~~~~~~~~~~e~--t~E~~P~~~~~~~l~~l~~  127 (395)
                      .+++.+.++.+-.   ..-++.|+++|.|  -..|+.++-.++++...+..+  ....+  .+-+..-.-+.+..+..++
T Consensus        23 ~~~l~~~i~~li~---~~Gv~gi~v~GttGE~~~Ls~~Er~~l~~~~~~~~~--~~~~vi~gv~~~s~~~~iela~~a~~   97 (293)
T d1f74a_          23 EKGLRQIIRHNID---KMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAK--DQIALIAQVGSVNLKEAVELGKYATE   97 (293)
T ss_dssp             HHHHHHHHHHHHH---TSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT--TSSEEEEECCCSCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH---HCCCCEEEECCCCCCHHHCCHHHHHHHHHEEECCCC--CCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             9999999999998---079999998950730102899998444310000246--75554212454337889999999997


Q ss_pred             CCCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC-CCHHHHHH
Q ss_conf             3454114323433201345542244313478999986302444333210002585432211-12788753
Q gi|254780628|r  128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWE-MELQRALS  196 (395)
Q Consensus       128 ~Gv~RiS~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli~GlPgqt~e~~~-~~l~~~~~  196 (395)
                      .|.+-+.+-...+.         ..+.+++.+.+..+-+.. .+.+ +||..|.-|--++- +.+.++.+
T Consensus        98 ~Gad~i~~~pP~~~---------~~s~~~~~~~~~~v~~~~-~~pi-~iYn~P~~tg~~l~~~~l~~L~~  156 (293)
T d1f74a_          98 LGYDCLSAVTPFYY---------KFSFPEIKHYYDTIIAET-GSNM-IVYSIPFLTGVNMGIEQFGELYK  156 (293)
T ss_dssp             HTCSEEECCCCCSS---------CCCHHHHHHHHHHHHHHH-CCCE-EEECCSSCSCHHHHHHHHHHHHT
T ss_pred             CCCCEEECCCCCCC---------CCCHHHHHHHHHCCCCCC-CCEE-EEEEECCCEECCCCCHHHHHHHH
T ss_conf             69997651576322---------332199998872023468-8548-99852011001233213555542


No 142
>d1zyba1 a.4.5.4 (A:148-220) Probable transcription regulator BT4300, C-terminal domain {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=26.47  E-value=16  Score=13.98  Aligned_cols=60  Identities=13%  Similarity=0.164  Sum_probs=36.9

Q ss_pred             CHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHCCCHH--HHHHHHHHHCCCEEEEECCEEEECHHH
Q ss_conf             9999899999996562379-----988899988389964--999999998799498559899995675
Q gi|254780628|r  322 SSEQQADEFLMMGLRLREG-----ISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFSRLRCTQRG  382 (395)
Q Consensus       322 s~~e~~~e~l~~~LR~~~G-----id~~~~~~~fg~~~~--~~~~~~L~~~Gli~~~~~~~l~lT~~G  382 (395)
                      +-++++.++++....-..|     ++.+++....|.+-.  ...++.|+++|+|+ ...+++.+.+.-
T Consensus         4 dv~~Rla~~Ll~~~~~~~~~~~i~lt~~elA~~lg~sr~tvsr~l~~l~~~g~I~-~~~~~i~I~d~~   70 (73)
T d1zyba1           4 DLKSKIIRFFLSHCEKPQGEKTFKVKMDDLARCLDDTRLNISKTLNELQDNGLIE-LHRKEILIPDAQ   70 (73)
T ss_dssp             SHHHHHHHHHHTTCSSSSSCEEEECCHHHHHHHHTSCHHHHHHHHHHHHHTTSCE-EETTEEEESCGG
T ss_pred             CHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCHHHHHHHHHHHHHCCCEE-ECCCEEEECCHH
T ss_conf             8999999999984565089867506999999897988999999999999889899-629999985678


No 143
>d1tqja_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Synechocystis sp. PCC 6803 [TaxId: 1148]}
Probab=26.31  E-value=16  Score=13.96  Aligned_cols=178  Identities=18%  Similarity=0.222  Sum_probs=81.9

Q ss_pred             HHHHHHHHHHHHHCCCEEEEEE--ECCCC--CCC-CCHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCCHHHHHHHHHH
Q ss_conf             9999999998761895058999--62888--887-8999999999766404764443321133-2104100234776630
Q gi|254780628|r   54 SFLTEMQWMRQLTGPRSISSIF--FGGGT--PSL-IEPQNIALILDGIAKNWTVSSNVEITIE-ANPSSVEVNNFQGYRK  127 (395)
Q Consensus        54 ~l~~Ei~~~~~~~~~~~~~~iy--~GGGT--Ps~-l~~~~l~~ll~~i~~~~~~~~~~e~t~E-~~P~~~~~~~l~~l~~  127 (395)
                      .|.+|++.+.+.  +  ++.++  +--|+  |++ ++++    +++.+++...+.  .++.+- .+|    ...+..+.+
T Consensus        16 ~l~~~i~~l~~~--g--~d~iHiDImDG~Fvpn~t~~~~----~~~~i~~~t~~~--~dvHLMv~~P----~~~i~~~~~   81 (221)
T d1tqja_          16 RLGEEIKAVDEA--G--ADWIHVDVMDGRFVPNITIGPL----IVDAIRPLTKKT--LDVHLMIVEP----EKYVEDFAK   81 (221)
T ss_dssp             GHHHHHHHHHHT--T--CSEEEEEEEBSSSSSCBCBCHH----HHHHHGGGCCSE--EEEEEESSSG----GGTHHHHHH
T ss_pred             HHHHHHHHHHHC--C--CCEEEEECCCCCCCCCCCCCCH----HHHHHHHCCCCC--EEEEEEEECH----HHHHHHHHH
T ss_conf             999999999974--9--9889998726974676564827----677665316762--3346787088----898998743


Q ss_pred             CCCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEE
Q ss_conf             34541143234332013455422443134789999863024443332100025854322111278875318001234646
Q gi|254780628|r  128 AGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQL  207 (395)
Q Consensus       128 ~Gv~RiS~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli~GlPgqt~e~~~~~l~~~~~l~p~~is~Y~l  207 (395)
                      +|.+++++=+++..+.            ++.+.+..+++.+..+.+-+-   |....+.+..-++     ..|.|.+  +
T Consensus        82 ~g~~~i~~H~E~~~~~------------~~~~~~~~i~~~g~~~Gial~---p~T~~~~l~~~l~-----~~d~vlv--M  139 (221)
T d1tqja_          82 AGADIISVHVEHNASP------------HLHRTLCQIRELGKKAGAVLN---PSTPLDFLEYVLP-----VCDLILI--M  139 (221)
T ss_dssp             HTCSEEEEECSTTTCT------------THHHHHHHHHHTTCEEEEEEC---TTCCGGGGTTTGG-----GCSEEEE--E
T ss_pred             CCCEEEEEEECCCCCH------------HHHHHHHHHHHCCCCEEEEEC---CCCCHHHHHHHHH-----HHCEEEE--E
T ss_conf             1452799862245673------------668999999977997799964---8986889999973-----3118999--9


Q ss_pred             EEECCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCC--CCCCEEECCCC
Q ss_conf             882596000145449802110356788999865578870962423674343101101332112--44412320432
Q gi|254780628|r  208 TIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNYW--RYGDYIGIGPG  281 (395)
Q Consensus       208 ~i~~~t~l~~~~~~~~~~~p~~~~~~~~~~~a~e~L~~~GY~~Yeis~fak~~~~s~hn~~Yw--~~~d~iG~G~G  281 (395)
                      .+.||-.       |+.-.|   ...+.-....+++.+.++. +.+   .-.|.-+..|..-+  .|.|.+=.|.+
T Consensus       140 ~V~pG~~-------GQ~f~~---~~~~ki~~l~~~~~~~~~~-~~I---~VDGGIn~~~i~~l~~~Gad~~V~GS~  201 (221)
T d1tqja_         140 SVNPGFG-------GQSFIP---EVLPKIRALRQMCDERGLD-PWI---EVDGGLKPNNTWQVLEAGANAIVAGSA  201 (221)
T ss_dssp             SSCC-----------CCCCG---GGHHHHHHHHHHHHHHTCC-CEE---EEESSCCTTTTHHHHHHTCCEEEESHH
T ss_pred             EECCCCC-------CCCCCH---HHHHHHHHHHHHHHCCCCC-EEE---EEECCCCHHHHHHHHHCCCCEEEECHH
T ss_conf             8647888-------742200---1579999988654203653-379---997776889899999869999998958


No 144
>d2coba1 a.4.1.15 (A:8-70) Ligand-dependent corepressor (LCoR) {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.22  E-value=6.7  Score=16.47  Aligned_cols=36  Identities=25%  Similarity=0.257  Sum_probs=24.5

Q ss_pred             CCCCCHHHHHHHHHHHCCCCCCC-CCCCCCCCCCCCC
Q ss_conf             24431347899998630244433-3210002585432
Q gi|254780628|r  150 RNHNASEAIAAIHLARNIFPRMS-FDLIYALPKQTMT  185 (395)
Q Consensus       150 R~~~~~~~~~~~~~~~~~~~~v~-iDli~GlPgqt~e  185 (395)
                      |.++.+...+++..+...-..|+ ..-+||.|..|.|
T Consensus         5 R~Yd~d~l~eAv~~V~~G~MSV~rA~~~ygvPHSTLE   41 (63)
T d2coba1           5 RQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTLE   41 (63)
T ss_dssp             CCCCHHHHHHHHHHHHTTSSCHHHHHHHHTCCHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHCCEEEHHCCCCCCCCCHHHH
T ss_conf             2168889999999998354122303753057750112


No 145
>d1ixsb1 a.4.5.11 (B:243-318) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=26.04  E-value=16  Score=13.93  Aligned_cols=45  Identities=20%  Similarity=0.237  Sum_probs=33.3

Q ss_pred             CCHHHHHHHHCCCH---HHHHHHHHHHCCCEEEEECCEEEECHHHHHHH
Q ss_conf             98889998838996---49999999987994985598999956758989
Q gi|254780628|r  341 ISVKDWEMLAGRNL---DIECERNLQRQGFIERVQFSRLRCTQRGMTML  386 (395)
Q Consensus       341 id~~~~~~~fg~~~---~~~~~~~L~~~Gli~~~~~~~l~lT~~G~~~~  386 (395)
                      +-++.+...-|.+-   ++.....|.+.|+|.++--+| ++|++|+..+
T Consensus        23 VGl~tlA~~lgE~~~TiEdviEPyLiq~G~i~RTprGR-~~T~~a~~hL   70 (76)
T d1ixsb1          23 VGLATLATALSEDPGTLEEVHEPYLIRQGLLKRTPRGR-VATELAYRHL   70 (76)
T ss_dssp             CCSHHHHGGGSSCTTHHHHTSHHHHHHTTSEEECSSSE-EECHHHHHHH
T ss_pred             CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHH-HHHHHHHHHC
T ss_conf             50999999983875288887148999970786589728-8689999981


No 146
>d1vkia_ d.116.1.1 (A:) Hypothetical protein Atu3699 {Agrobacterium tumefaciens, strain C58 [TaxId: 358]}
Probab=26.00  E-value=16  Score=13.93  Aligned_cols=40  Identities=5%  Similarity=-0.019  Sum_probs=23.6

Q ss_pred             HCCCCCCCCCCHHHHHHHHCCCCCCCC----CCCEEECCCCCCC
Q ss_conf             709624236743431011013321124----4412320432001
Q gi|254780628|r  245 AHGLHAYEISNHSFLGAESLHNLNYWR----YGDYIGIGPGAHS  284 (395)
Q Consensus       245 ~~GY~~Yeis~fak~~~~s~hn~~Yw~----~~d~iG~G~GA~S  284 (395)
                      -.||..=.++-|+........-..|++    ..+.+.|++|...
T Consensus        94 ~~g~~~G~V~Pfg~~~d~~~~v~viiD~~l~~~~~i~~~~g~~~  137 (165)
T d1vkia_          94 YLGVVPGSVTVFGAINDTARQVTFVLDSDLLENELVNGHPLSND  137 (165)
T ss_dssp             HHCCCTTCCCGGGGGGCTTCCEEEEEETTGGGSSEEEECSSSTT
T ss_pred             HHCCCCCCCCCHHHCCCCCCCCCEEHHHHHHCCCEEEEECCCCC
T ss_conf             51998663446001148655655532157861998999479897


No 147
>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=25.35  E-value=16  Score=14.01  Aligned_cols=38  Identities=32%  Similarity=0.482  Sum_probs=24.5

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCC
Q ss_conf             33211332104100234776630345411432343320
Q gi|254780628|r  105 NVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEE  142 (395)
Q Consensus       105 ~~e~t~E~~P~~~~~~~l~~l~~~Gv~RiS~GvQs~~~  142 (395)
                      ++++-+||+|...+.++++...+.|+.+|-++-.+-++
T Consensus        79 ~vDvViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~~~~  116 (172)
T d2czca2          79 KVDIIVDATPGGIGAKNKPLYEKAGVKAIFQGGEKADV  116 (172)
T ss_dssp             TCSEEEECCSTTHHHHHHHHHHHHTCEEEECTTSCGGG
T ss_pred             CCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf             69899988887778999999998499899988998556


No 148
>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL2 [TaxId: 5722]}
Probab=25.23  E-value=17  Score=13.83  Aligned_cols=20  Identities=15%  Similarity=-0.007  Sum_probs=7.4

Q ss_pred             HHHHHHHHH-HCCCCCCCCCC
Q ss_conf             478999986-30244433321
Q gi|254780628|r  156 EAIAAIHLA-RNIFPRMSFDL  175 (395)
Q Consensus       156 ~~~~~~~~~-~~~~~~v~iDl  175 (395)
                      +....++.+ ++.+.-+-+|=
T Consensus       101 d~~~~~~~~a~~~~~~~vVDn  121 (331)
T d1pffa_         101 DIEDAVKQARKQKDILVIVDN  121 (331)
T ss_dssp             CHHHHHHHHTTSSSCEEEEEC
T ss_pred             CCHHHHHHHHCCCCCEEEEEC
T ss_conf             202455542203682698615


No 149
>d2h80a1 a.60.1.3 (A:11-81) Deleted in Liver Cancer 2, DLC2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.11  E-value=9.7  Score=15.40  Aligned_cols=15  Identities=20%  Similarity=0.226  Sum_probs=12.4

Q ss_pred             HHHHHHHHHCCCCCC
Q ss_conf             986557887096242
Q gi|254780628|r  237 NLTQSITSAHGLHAY  251 (395)
Q Consensus       237 ~~a~e~L~~~GY~~Y  251 (395)
                      ..|.++|+++||.||
T Consensus        12 ~eAC~WLraaGFpqY   26 (71)
T d2h80a1          12 KEACDWLRAAGFPQY   26 (71)
T ss_dssp             HHHHHHHHHTTCHHH
T ss_pred             HHHHHHHHHCCCHHH
T ss_conf             999999998388489


No 150
>d1ev0a_ d.71.1.1 (A:) Cell division protein MinE topological specificity domain {Escherichia coli [TaxId: 562]}
Probab=25.08  E-value=17  Score=13.82  Aligned_cols=34  Identities=24%  Similarity=0.380  Sum_probs=23.9

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHCCCCCCCC-CCCCC
Q ss_conf             288888789999999997664047644433-21133
Q gi|254780628|r   77 GGGTPSLIEPQNIALILDGIAKNWTVSSNV-EITIE  111 (395)
Q Consensus        77 GGGTPs~l~~~~l~~ll~~i~~~~~~~~~~-e~t~E  111 (395)
                      |++.|.+| |.--.+|+..|+++..+.++. .|.+|
T Consensus         2 ~~~~PDyL-p~Lq~eil~VI~KyV~Id~d~v~V~le   36 (58)
T d1ev0a_           2 SDAEPHYL-PQLRKDILEVICKYVQIDPEMVTVQLE   36 (58)
T ss_dssp             GGGTTSSH-HHHHHHHHHHHHHHSCCCGGGEEEEEE
T ss_pred             CCCCCCHH-HHHHHHHHHHHHHHEEECHHHEEEEEE
T ss_conf             98886218-999999999998747506799699986


No 151
>d1cmwa2 c.120.1.2 (A:10-173) 5' to 3' exonuclease domain of DNA polymerase Taq {Thermus aquaticus [TaxId: 271]}
Probab=25.07  E-value=17  Score=13.81  Aligned_cols=74  Identities=19%  Similarity=0.134  Sum_probs=40.9

Q ss_pred             CCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEEEC--CCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             0258543221112788753180012346468825--960001454498021103567889998655788709624236
Q gi|254780628|r  178 ALPKQTMTQWEMELQRALSYAVDHLSLYQLTIEK--GTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEI  253 (395)
Q Consensus       178 GlPgqt~e~~~~~l~~~~~l~p~~is~Y~l~i~~--~t~l~~~~~~~~~~~p~~~~~~~~~~~a~e~L~~~GY~~Yei  253 (395)
                      |.|-.....+.+++..+++..|+++-+.-....+  ...++..++.+....|  +....++..+.+.+...|...++.
T Consensus        29 g~~~~~i~gf~~~l~~~~~~~~~~~~v~~d~~~~~~R~~l~p~YK~~R~~~~--~~~~~~~~~~~~~~~~~g~~~~~~  104 (164)
T d1cmwa2          29 GEPVQAVYGFAKSLLKALKEDGDAVIVVFDAKAPSFRHEAYGGYKAGRAPTP--EDFPRQLALIKELVDLLGLARLEV  104 (164)
T ss_dssp             SCBCHHHHHHHHHHHHHHHHCCSEEEEECCCSSSCTTGGGGSTTTSCCCCCC--SSHHHHHHHHHHHHHHTTCEEECC
T ss_pred             CCEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCC--HHHHHHHHHHHHHHHHCCCEEEEE
T ss_conf             9830899999999999970488618999722566313554323442166673--257888899999975147327874


No 152
>d1lxja_ d.58.48.1 (A:) Hypothetical protein YB1001C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.92  E-value=17  Score=13.80  Aligned_cols=64  Identities=19%  Similarity=0.207  Sum_probs=36.5

Q ss_pred             EEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCH---HHHHHHHHHCCCCCEEEEC
Q ss_conf             589996288888789999999997664047644---433211332104100---2347766303454114323
Q gi|254780628|r   71 ISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS---SNVEITIEANPSSVE---VNNFQGYRKAGVNRISLGV  137 (395)
Q Consensus        71 ~~~iy~GGGTPs~l~~~~l~~ll~~i~~~~~~~---~~~e~t~E~~P~~~~---~~~l~~l~~~Gv~RiS~Gv  137 (395)
                      +.-+=+|.|+||+  .+..++.++.|++. ++.   ...+.++|+..+.+-   .+.-+.+.+.|++||+.-+
T Consensus        10 ~sv~Pigt~~~sv--s~yVa~~i~~i~~s-Gl~y~~~pmgT~IEG~~del~~~v~~~he~~~~~G~~RV~t~i   79 (104)
T d1lxja_          10 VCMVPIGTDSASI--SDFVALIEKKIRES-PLKSTLHSAGTTIEGPWDDVMGLIGEIHEYGHEKGYVRVHTDI   79 (104)
T ss_dssp             EEEEEESCSCSCC--HHHHHHHHHHHHTS-SSEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             EEEEECCCCCCCH--HHHHHHHHHHHHHC-CCCEEECCCCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf             9997468999768--99999999999975-9975865885367778999999999999999976998599999


No 153
>d1s4na_ c.68.1.16 (A:) Glycolipid 2-alpha-mannosyltransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.73  E-value=14  Score=14.38  Aligned_cols=87  Identities=9%  Similarity=0.204  Sum_probs=38.8

Q ss_pred             HHHHHHHHHHHHHHHC---CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHC--CCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             9999999999987618---95058999628888878999999999766404--764443321133210410023477663
Q gi|254780628|r   52 IQSFLTEMQWMRQLTG---PRSISSIFFGGGTPSLIEPQNIALILDGIAKN--WTVSSNVEITIEANPSSVEVNNFQGYR  126 (395)
Q Consensus        52 ~~~l~~Ei~~~~~~~~---~~~~~~iy~GGGTPs~l~~~~l~~ll~~i~~~--~~~~~~~e~t~E~~P~~~~~~~l~~l~  126 (395)
                      ++.+++-|+.+...+.   +.+  -|++.-|-   ++.+-...+-..+...  |..-+..+.   .-|+.+++++...++
T Consensus        31 l~~~l~si~~~e~rFN~ky~YP--wvflnd~~---fteeFk~~i~~~~sg~~~F~~i~~e~w---~~P~~Id~~~~~~~~  102 (339)
T d1s4na_          31 LKGLLSSIKYVENKINKKFPYP--WVFLNDEP---FTEEFKEAVTKAVSSEVKFGILPKEHW---SYPEWINQTKAAEIR  102 (339)
T ss_dssp             HHHHHHHHHHHHHHTTTTSCCC--EEEEESSC---CCHHHHHHHHHHCSSCEEEEECCGGGS---SCCTTSCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCCC--EEEECCCC---CCHHHHHHHHHHCCCCEEEEECCHHHC---CCCCCCCHHHHHHHH
T ss_conf             9999999999999734358999--89946998---999999999986688638997598986---798986989999999


Q ss_pred             HCCCCCEEEECCCCCCHHHHHHHC
Q ss_conf             034541143234332013455422
Q gi|254780628|r  127 KAGVNRISLGVQSLEEQSLRFLGR  150 (395)
Q Consensus       127 ~~Gv~RiS~GvQs~~~~~l~~~~R  150 (395)
                      ..+..    ||.-.+..--+.|.|
T Consensus       103 ~~~~~----~v~yg~s~sYrhMCR  122 (339)
T d1s4na_         103 ADAAT----KYIYGGSESYRHMCR  122 (339)
T ss_dssp             HHHTT----TSTTTTCHHHHHHHH
T ss_pred             HHHHC----CCCCCCCCCHHHHHH
T ss_conf             86442----676544211067887


No 154
>d2etla1 d.3.1.6 (A:1-223) Ubiquitin carboxyl-terminal hydrolase isozyme l1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.73  E-value=17  Score=13.77  Aligned_cols=115  Identities=17%  Similarity=0.179  Sum_probs=69.3

Q ss_pred             CCCCCCCCCHHHHHHHHHHCCCCC-EEE-ECCCCCCHHHHHHHCCCC-----------CHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             133210410023477663034541-143-234332013455422443-----------1347899998630244433321
Q gi|254780628|r  109 TIEANPSSVEVNNFQGYRKAGVNR-ISL-GVQSLEEQSLRFLGRNHN-----------ASEAIAAIHLARNIFPRMSFDL  175 (395)
Q Consensus       109 t~E~~P~~~~~~~l~~l~~~Gv~R-iS~-GvQs~~~~~l~~~~R~~~-----------~~~~~~~~~~~~~~~~~v~iDl  175 (395)
                      -+|++|+-++    +.+++.||.. +++ .|=|+|++.|..+-|+--           .+... .-+.........+-++
T Consensus         5 PLESnP~Vft----~l~~~LGv~~~~~f~DVysld~~~L~~ip~Pv~alIfLfp~~~~~~~~~-~~~~~~~~~~~~~~~v   79 (223)
T d2etla1           5 PMEINPEMLN----KVLSRLGVAGQWRFVDVLGLEEESLGSVPAPACALLLLFPLTAQHENFR-KKQIEELKGQEVSPKV   79 (223)
T ss_dssp             CCCCSHHHHH----HHHHHTTBCSSEEEEECCCCSSTTSSSSCSCEEEEEEEEECCHHHHHHH-HHHHHHHTTTTCCTTS
T ss_pred             CCCCCHHHHH----HHHHHCCCCCCCEEEEEEECCHHHHHCCCCCCEEEEEEEECCCHHHHHC-CCCCCCCCCCCCCCCC
T ss_conf             7556979999----9999809999718999236799999427877569999985681354420-3333323457788662


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHC--CCCCEEEEEEEEECCCEEHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             0002585432211127887531--8001234646882596000145449802110356788999
Q gi|254780628|r  176 IYALPKQTMTQWEMELQRALSY--AVDHLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYN  237 (395)
Q Consensus       176 i~GlPgqt~e~~~~~l~~~~~l--~p~~is~Y~l~i~~~t~l~~~~~~~~~~~p~~~~~~~~~~  237 (395)
                      .|  -.||...-..|+..+-.+  .++++     .+.+|+.|.+..+...- + +.+++.....
T Consensus        80 ~f--~kQtI~NACgT~AlLh~l~N~~~~~-----~i~~gs~L~~f~~~t~~-~-~p~eRg~~l~  134 (223)
T d2etla1          80 YF--MKQTIGNSCGTIGLIHAVANNQDKL-----GFEDGSVLKQFLSETEK-M-SPEDRAKCFE  134 (223)
T ss_dssp             CC--CCCCSBTCHHHHHHHHHHHTTTTTC-----CBCTTCHHHHHHHHTTT-S-CHHHHHHHHH
T ss_pred             EE--EHHHHCCHHHHHHHHHHHHCCCCCC-----CCCCHHHHHHHHHHCCC-C-CHHHHHHHHH
T ss_conf             77--3885433056889999876673212-----53620588999997358-9-9799999861


No 155
>d1i42a_ d.15.1.2 (A:) p47 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=23.89  E-value=18  Score=13.67  Aligned_cols=64  Identities=19%  Similarity=0.242  Sum_probs=38.6

Q ss_pred             CCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             54114323433201345542244313478999986302444333210002585432211127887
Q gi|254780628|r  130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRA  194 (395)
Q Consensus       130 v~RiS~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli~GlPgqt~e~~~~~l~~~  194 (395)
                      +.+|.+-.-++. .+....+-.++..++++.+...+.....-++.|+.++|....++.-.+|+.+
T Consensus        14 ~t~I~iRlPdG~-~~~~~F~~~~tl~dv~~~v~~~~~~~~~~~f~L~t~~Prr~l~d~~~TL~e~   77 (89)
T d1i42a_          14 TTNIQIRLADGG-RLVQKFNHSHRISDIRLFIVDARPAMAATSFVLMTTFPNKELADENQTLKEA   77 (89)
T ss_dssp             CEEEEEEETTTC-CEEEEECSSSCGGGHHHHHHHHCTTTSSCCEEEEETTTTEECCCCSSCSGGG
T ss_pred             CEEEEEECCCCC-EEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCHHHC
T ss_conf             479999969999-9999988922299999999983766899878995589996657774808898


No 156
>d1in4a1 a.4.5.11 (A:255-329) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=23.81  E-value=18  Score=13.66  Aligned_cols=45  Identities=22%  Similarity=0.301  Sum_probs=33.9

Q ss_pred             CCHHHHHHHHCCCHH---HHHHHHHHHCCCEEEEECCEEEECHHHHHHH
Q ss_conf             988899988389964---9999999987994985598999956758989
Q gi|254780628|r  341 ISVKDWEMLAGRNLD---IECERNLQRQGFIERVQFSRLRCTQRGMTML  386 (395)
Q Consensus       341 id~~~~~~~fg~~~~---~~~~~~L~~~Gli~~~~~~~l~lT~~G~~~~  386 (395)
                      +-++.+...-|.+-+   +.....|.+.|+|.++--+| ++|.+|+.++
T Consensus        23 vGl~tlAa~l~e~~~TiEdviEPyLiq~G~i~RTpRGR-~~T~~~~~hl   70 (75)
T d1in4a1          23 VGLNALAASLGVEADTLSEVYEPYLLQAGFLARTPRGR-IVTEKAYKHL   70 (75)
T ss_dssp             BCHHHHHHHHTSCHHHHHHHTHHHHHHTTSEEEETTEE-EECHHHHHHT
T ss_pred             CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHH-HHHHHHHHHC
T ss_conf             74999999986875189998347999960775489638-7689999991


No 157
>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}
Probab=23.77  E-value=18  Score=13.65  Aligned_cols=28  Identities=18%  Similarity=0.274  Sum_probs=15.6

Q ss_pred             CCHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             3134789999863024443332100025
Q gi|254780628|r  153 NASEAIAAIHLARNIFPRMSFDLIYALP  180 (395)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~v~iDli~GlP  180 (395)
                      ...++....+.+++.+-.+-+|==+.-|
T Consensus       159 ~v~Di~~i~~ia~~~g~~~vvDnT~atP  186 (392)
T d1gc0a_         159 HMADIAGVAKIARKHGATVVVDNTYCTP  186 (392)
T ss_dssp             CCCCHHHHHHHHGGGTCEEEEECTTTHH
T ss_pred             EECCHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf             5424399999998459879983672574


No 158
>d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=23.56  E-value=18  Score=13.63  Aligned_cols=27  Identities=15%  Similarity=0.118  Sum_probs=15.8

Q ss_pred             CHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             134789999863024443332100025
Q gi|254780628|r  154 ASEAIAAIHLARNIFPRMSFDLIYALP  180 (395)
Q Consensus       154 ~~~~~~~~~~~~~~~~~v~iDli~GlP  180 (395)
                      ..++.+..+.+++.+.-+-||==++-|
T Consensus       169 v~Di~~ia~ia~~~g~~~vVDnT~atP  195 (398)
T d1qgna_         169 CVDIELVSKLCHEKGALVCIDGTFATP  195 (398)
T ss_dssp             CCCHHHHHHHHHHTTCEEEEECTTTCT
T ss_pred             CCHHHHHHHHHHHCCCEEEECCEEECC
T ss_conf             321799999886449879961502144


No 159
>d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]}
Probab=23.04  E-value=18  Score=13.56  Aligned_cols=24  Identities=13%  Similarity=0.239  Sum_probs=10.3

Q ss_pred             HHCCCEEEEEC---CEE-EECHHHHHHHH
Q ss_conf             98799498559---899-99567589899
Q gi|254780628|r  363 QRQGFIERVQF---SRL-RCTQRGMTMLD  387 (395)
Q Consensus       363 ~~~Gli~~~~~---~~l-~lT~~G~~~~d  387 (395)
                      .+-||+. +|-   ++- ...+.+..+-+
T Consensus       428 ~RFGL~~-VD~~~~~~~R~pK~S~~~y~~  455 (462)
T d1wcga1         428 IHFGLVK-IDFNDPQRTRTKRESYTYFKN  455 (462)
T ss_dssp             SBCCSEE-ECTTSTTCCEEECHHHHHHHH
T ss_pred             CCCCEEE-EECCCCCCCCCCCCHHHHHHH
T ss_conf             7663189-708899885522419999999


No 160
>d1fp2a1 a.4.5.29 (A:8-108) Isoflavone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=22.83  E-value=19  Score=13.54  Aligned_cols=48  Identities=17%  Similarity=0.118  Sum_probs=33.2

Q ss_pred             CCCHHHHHHHHCCCH-----HHHHHHHHHHCCCEEEE--ECCEEEECHHHHHHHH
Q ss_conf             998889998838996-----49999999987994985--5989999567589899
Q gi|254780628|r  340 GISVKDWEMLAGRNL-----DIECERNLQRQGFIERV--QFSRLRCTQRGMTMLD  387 (395)
Q Consensus       340 Gid~~~~~~~fg~~~-----~~~~~~~L~~~Gli~~~--~~~~l~lT~~G~~~~d  387 (395)
                      +++.+++.+..|.+.     ...+++-|...|++...  +++++.+|+.++++++
T Consensus        44 p~t~~eLa~~~~~~~~~~~~L~RlLR~L~~~gi~~~~~~~~~~Y~lt~~s~~Lv~   98 (101)
T d1fp2a1          44 PISLSNLVSILQVPSSKIGNVRRLMRYLAHNGFFEIITKEEESYALTVASELLVR   98 (101)
T ss_dssp             CEEHHHHHHHHTCCGGGHHHHHHHHHHHHHTTSEEEEESSSEEEEECHHHHTTST
T ss_pred             CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCEEECCHHHHHHHC
T ss_conf             9999999987499876515899999999757951443289982734898997506


No 161
>d1hkva2 c.1.6.1 (A:46-310) Diaminopimelate decarboxylase LysA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=22.67  E-value=19  Score=13.52  Aligned_cols=13  Identities=46%  Similarity=0.595  Sum_probs=4.8

Q ss_pred             CCEEEEEEEEECC
Q ss_conf             0123464688259
Q gi|254780628|r  200 DHLSLYQLTIEKG  212 (395)
Q Consensus       200 ~~is~Y~l~i~~~  212 (395)
                      +++.+-.+..+-|
T Consensus       158 ~~l~~~GlH~HvG  170 (265)
T d1hkva2         158 DHLRLVGLHSHIG  170 (265)
T ss_dssp             SSEEEEEEECCCE
T ss_pred             CCCEEEEEEEEEC
T ss_conf             6732666555411


No 162
>d1yg2a_ a.4.5.61 (A:) Hypothetical protein AphA {Vibrio cholerae [TaxId: 666]}
Probab=22.48  E-value=19  Score=13.49  Aligned_cols=12  Identities=17%  Similarity=0.205  Sum_probs=5.7

Q ss_pred             HHHHHHHCCCCC
Q ss_conf             655788709624
Q gi|254780628|r  239 TQSITSAHGLHA  250 (395)
Q Consensus       239 a~e~L~~~GY~~  250 (395)
                      +.+.|++.||..
T Consensus        42 ~L~kLe~~Gli~   53 (178)
T d1yg2a_          42 ELNKMGEQGLVT   53 (178)
T ss_dssp             HHHHHHHTTSEE
T ss_pred             HHHHHHHCCCEE
T ss_conf             999999789847


No 163
>d3c7bb2 d.58.36.2 (B:4-122) Dissimilatory sulfite reductase subunit beta, DsrB {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=22.30  E-value=19  Score=13.47  Aligned_cols=30  Identities=27%  Similarity=0.298  Sum_probs=22.5

Q ss_pred             CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf             95058999628888878999999999766404
Q gi|254780628|r   68 PRSISSIFFGGGTPSLIEPQNIALILDGIAKN   99 (395)
Q Consensus        68 ~~~~~~iy~GGGTPs~l~~~~l~~ll~~i~~~   99 (395)
                      |.++-||-.|  +|-+++.++|.+|.+...++
T Consensus        45 g~~~~tVR~g--~prl~S~~~iR~iadIAdKY   74 (119)
T d3c7bb2          45 GDVIYVVRFG--TPRLLSIYTVRELCDIADKY   74 (119)
T ss_dssp             SCEEEEEEEC--CCSEEEHHHHHHHHHHHHHH
T ss_pred             CCEEEEEECC--CCCCCCHHHHHHHHHHHHHH
T ss_conf             9879998658--85402699999999999996


No 164
>d2c1ha1 c.1.10.3 (A:10-328) 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) {Prosthecochloris vibrioformis [TaxId: 1098]}
Probab=22.14  E-value=17  Score=13.84  Aligned_cols=38  Identities=16%  Similarity=0.253  Sum_probs=15.7

Q ss_pred             CCCCCCCCCCCHHHHHHC-CCCCEEEEEEEEECCCEEHH
Q ss_conf             585432211127887531-80012346468825960001
Q gi|254780628|r  180 PKQTMTQWEMELQRALSY-AVDHLSLYQLTIEKGTLFYK  217 (395)
Q Consensus       180 Pgqt~e~~~~~l~~~~~l-~p~~is~Y~l~i~~~t~l~~  217 (395)
                      |..-.+.-...++.+++- +-.++.+-++...-.+.||.
T Consensus       160 PSdMMDGrV~aIR~~Ld~~g~~~v~ImSYsaKfaS~fYG  198 (319)
T d2c1ha1         160 PSDMMDGRIGAIREALDETDHSDVGILSYAAKYASSFYG  198 (319)
T ss_dssp             CCSCCTTHHHHHHHHHHHTTCTTSEEEEEEEEBCCSCCH
T ss_pred             CCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHH
T ss_conf             434425699999999984474455021277777477657


No 165
>d1ydhb_ c.129.1.1 (B:) Hypothetical protein At5g11950 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=22.03  E-value=16  Score=14.00  Aligned_cols=53  Identities=28%  Similarity=0.510  Sum_probs=24.2

Q ss_pred             CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             837657730245788662889999999999999876189505899962888887899999999976640
Q gi|254780628|r   30 KKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAK   98 (395)
Q Consensus        30 ~~C~yC~f~~~~~~~~~~~~~y~~~l~~Ei~~~~~~~~~~~~~~iy~GGGTPs~l~~~~l~~ll~~i~~   98 (395)
                      +.|.||+-  .  ....  +.|.+. .+|+   ++.+....+. +-+|||.+-+|     ..+-+.+++
T Consensus         4 ~v~Vf~gs--~--~~~~--~~~~~~-a~~l---g~~La~~g~~-lv~GGG~~GlM-----ga~a~ga~~   56 (181)
T d1ydhb_           4 KICVFCGS--H--SGHR--EVFSDA-AIEL---GNELVKRKID-LVYGGGSVGLM-----GLISRRVYE   56 (181)
T ss_dssp             EEEEECCS--C--CCSS--THHHHH-HHHH---HHHHHHTTCE-EEECCCSSHHH-----HHHHHHHHH
T ss_pred             EEEEECCC--C--CCCC--CHHHHH-HHHH---HHHHHHCCCE-EEECCCCHHHH-----HHHHHHHHH
T ss_conf             79998657--8--9959--789999-9999---9999987982-99899841788-----999876764


No 166
>d2qwva1 c.116.1.7 (A:5-205) Uncharacterized protein VCA1059 {Vibrio cholerae [TaxId: 666]}
Probab=21.70  E-value=19  Score=13.39  Aligned_cols=25  Identities=28%  Similarity=0.398  Sum_probs=18.2

Q ss_pred             CHHHHHHHHHHCCCCCEEEECCCCC
Q ss_conf             0023477663034541143234332
Q gi|254780628|r  117 VEVNNFQGYRKAGVNRISLGVQSLE  141 (395)
Q Consensus       117 ~~~~~l~~l~~~Gv~RiS~GvQs~~  141 (395)
                      ++++..+.|++.|..|||+|-.++.
T Consensus       158 ~~~~e~~~L~~~g~~~iSLGp~~L~  182 (201)
T d2qwva1         158 MPKKSGNSMKRLGVEKISLGPKMLF  182 (201)
T ss_dssp             -------CTTTTTCEEEECCSSCCC
T ss_pred             CCHHHHHHHHHCCCEEEEECCHHHH
T ss_conf             8978999887528704765607887


No 167
>d2axla1 a.4.5.43 (A:1-144) Werner syndrome ATP-dependent helicase WRN {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.70  E-value=19  Score=13.39  Aligned_cols=17  Identities=6%  Similarity=0.044  Sum_probs=10.0

Q ss_pred             HHHHHHHHHHHHHCCCC
Q ss_conf             88999865578870962
Q gi|254780628|r  233 VDLYNLTQSITSAHGLH  249 (395)
Q Consensus       233 ~~~~~~a~e~L~~~GY~  249 (395)
                      ...+......|...||.
T Consensus        64 ~~~w~~li~qli~~G~L   80 (144)
T d2axla1          64 ESWWKAFSRQLITEGFL   80 (144)
T ss_dssp             HHHHHHHHHHHHHHSSE
T ss_pred             HHHHHHHHHHHHHCCCC
T ss_conf             99999999999985860


No 168
>d3cu0a1 c.68.1.7 (A:75-335) 1,3-Glucuronyltransferase I (glcAT-I) {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.63  E-value=20  Score=13.38  Aligned_cols=137  Identities=12%  Similarity=-0.042  Sum_probs=73.6

Q ss_pred             EEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHC--
Q ss_conf             999628888878999999999766404764443321133210410023477663034541143234332013455422--
Q gi|254780628|r   73 SIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGR--  150 (395)
Q Consensus        73 ~iy~GGGTPs~l~~~~l~~ll~~i~~~~~~~~~~e~t~E~~P~~~~~~~l~~l~~~Gv~RiS~GvQs~~~~~l~~~~R--  150 (395)
                      |||+  =|||.-.+.|.+.|....+....+.+..=|-+| +.+..+.+.-..|++.|++-..+.+.+-+..-++....  
T Consensus         2 TIyv--VTPTY~R~~Q~a~LtRLa~TL~lVp~l~WIVVE-Da~~~t~~v~~lL~~sgl~y~HL~~~tp~~~~~~~~~~~~   78 (261)
T d3cu0a1           2 TIYV--VTPTYARLVQKAELVRLSQTLSLVPRLHWLLVE-DAEGPTPLVSGLLAASGLLFTHLVVLTPKAQRLREGEPGW   78 (261)
T ss_dssp             EEEE--EEEECCSTTHHHHHHHHHHHHTTSSSEEEEEEE-SSSSCCHHHHHHHHHHCSEEEEEECCCC-----------C
T ss_pred             EEEE--ECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEE-CCCCCCHHHHHHHHHCCCCEEEEECCCCHHHCCCCCCCCC
T ss_conf             6999--899888721578899998898618970299997-9999998999999973996597414786254035567544


Q ss_pred             --CCCCHHHHHHHHHHHCCCCCCCC------CCCCCCCCCCCCCCCCCHHHHHHCC-CCCEEEEEEEEECC
Q ss_conf             --44313478999986302444333------2100025854322111278875318-00123464688259
Q gi|254780628|r  151 --NHNASEAIAAIHLARNIFPRMSF------DLIYALPKQTMTQWEMELQRALSYA-VDHLSLYQLTIEKG  212 (395)
Q Consensus       151 --~~~~~~~~~~~~~~~~~~~~v~i------Dli~GlPgqt~e~~~~~l~~~~~l~-p~~is~Y~l~i~~~  212 (395)
                        .....+-..+++.+|.....+.=      +-+=|.-.--.++=-.|++.--+++ ...++..|.-+.-+
T Consensus        79 ~~prgv~qRn~aL~~ir~~~~~~~~~~~~~~~~~~GVVyFADDdNtYsl~LF~emR~~k~vgvWPVglvg~  149 (261)
T d3cu0a1          79 VHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEMRWTRGVSVWPVGLVGG  149 (261)
T ss_dssp             CCCCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHHHTSCSSEEECCEEEETT
T ss_pred             CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHEEEEEEEEEEEECC
T ss_conf             56647999999999999713322333346667776699980489723599999876411334688886047


No 169
>d1cmxa_ d.3.1.6 (A:) Ubiquitin carboxyl-terminal hydrolase UCH-l3 {Synthetic, based on Saccharomyces cerevisiae sequence}
Probab=21.59  E-value=18  Score=13.66  Aligned_cols=96  Identities=23%  Similarity=0.233  Sum_probs=54.5

Q ss_pred             CCCCCCCCCCHHHHHHHHHHCCCC-CEEE-ECCCCCC-HHHHHHHCCC-CC------HHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             113321041002347766303454-1143-2343320-1345542244-31------34789999863024443332100
Q gi|254780628|r  108 ITIEANPSSVEVNNFQGYRKAGVN-RISL-GVQSLEE-QSLRFLGRNH-NA------SEAIAAIHLARNIFPRMSFDLIY  177 (395)
Q Consensus       108 ~t~E~~P~~~~~~~l~~l~~~Gv~-RiS~-GvQs~~~-~~l~~~~R~~-~~------~~~~~~~~~~~~~~~~v~iDli~  177 (395)
                      |-+|++|+-+|    +.+++.||. .+.+ -|=|+|+ +.|..+-|+- ..      .+..+.   .+..-..-+-|++|
T Consensus         4 iPLESnP~Vft----~l~~~lGv~~~~~f~Dv~slde~~ll~~ip~Pv~alIfLfp~~~~~~~---~~~~~~~~~~~v~f   76 (229)
T d1cmxa_           4 VPIESNPEVFT----NFAHKLGLKNEWAYFDIYSLTEPELLAFLPRPVKAIVLLFPINEDRKS---STSQQITSSYDVIW   76 (229)
T ss_dssp             CCEECCHHHHH----HHHHHHTBCTTEEEEEECCSSCTTGGGSSCSSCCEEEEEEECC------------------CCCE
T ss_pred             ECCCCCHHHHH----HHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCCEEEEEEEECCCCCCC---CCCCCCCCCCCCEE
T ss_conf             25217868999----999981999846999814279689996068864699999744500123---43224677767466


Q ss_pred             CCCCCCCCCCCCCHHHHHHC--CCCCEEEEEEEEECCCEEHHHH
Q ss_conf             02585432211127887531--8001234646882596000145
Q gi|254780628|r  178 ALPKQTMTQWEMELQRALSY--AVDHLSLYQLTIEKGTLFYKMH  219 (395)
Q Consensus       178 GlPgqt~e~~~~~l~~~~~l--~p~~is~Y~l~i~~~t~l~~~~  219 (395)
                      -  .||...-..|+..+-.+  .++.       +.+|+.+....
T Consensus        77 ~--kQtI~NACgTiAlLh~l~N~~~~-------i~~gs~L~~fl  111 (229)
T d1cmxa_          77 F--KQSVKNACGLYAILHSLSNNQSL-------LEPGSDLDNFL  111 (229)
T ss_dssp             E--CCCSBTCHHHHHHHHHHHTCGGG-------BCTTSHHHHHH
T ss_pred             H--HHHHCCCHHHHHHHHHHHCCCHH-------CCCCCHHHHHH
T ss_conf             2--03305508999999998647011-------15550678999


No 170
>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.20  E-value=11  Score=14.98  Aligned_cols=10  Identities=40%  Similarity=0.976  Sum_probs=7.9

Q ss_pred             CCCCCCCCCE
Q ss_conf             1837657730
Q gi|254780628|r   29 VKKCPYCDFN   38 (395)
Q Consensus        29 ~~~C~yC~f~   38 (395)
                      |++|.+|++.
T Consensus         3 p~kck~cdya   12 (28)
T d2dmda1           3 PYKCKTCDYA   12 (28)
T ss_dssp             SEECSSSCCE
T ss_pred             CCCCCCCCCH
T ss_conf             7204536501


No 171
>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}
Probab=21.17  E-value=20  Score=13.32  Aligned_cols=97  Identities=19%  Similarity=0.244  Sum_probs=40.4

Q ss_pred             HHHHHHHHHHHCCCEEEEE--EECCCCCCCCCHHHHHHHHHHHHHCCCCCCCC----CCCCCCCCC-CCHHHHHHHHHHC
Q ss_conf             9999999876189505899--96288888789999999997664047644433----211332104-1002347766303
Q gi|254780628|r   56 LTEMQWMRQLTGPRSISSI--FFGGGTPSLIEPQNIALILDGIAKNWTVSSNV----EITIEANPS-SVEVNNFQGYRKA  128 (395)
Q Consensus        56 ~~Ei~~~~~~~~~~~~~~i--y~GGGTPs~l~~~~l~~ll~~i~~~~~~~~~~----e~t~E~~P~-~~~~~~l~~l~~~  128 (395)
                      ....+...+.+.+..+--|  =+||||=|-.+ ..++++.+..    +....+    .|.+|.... ..-.+-|+.|++.
T Consensus        72 ~e~~~~I~~~l~~~d~vfi~AGlGGgTGtgaa-pviA~~ake~----g~lvv~ivtlPF~~EG~~r~~~A~~gl~~L~~~  146 (194)
T d1w5fa1          72 LESEEKIREVLQDTHMVFITAGFGGGTGTGAS-PVIAKIAKEM----GILTVAIVTTPFYFEGPERLKKAIEGLKKLRKH  146 (194)
T ss_dssp             HHTHHHHHHHTTTCSEEEEEEETTSSHHHHHH-HHHHHHHHHT----TCEEEEEEEECCGGGCHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHCCCCEEEEEEECCCCCCCCHH-HHHHHHHHHC----CCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             88899999974689869999855887652067-8899999981----996599996033566789999899999999997


Q ss_pred             CCCCEEEECCCCC-CHHHHHHHCCCCCHHHHHHHH
Q ss_conf             4541143234332-013455422443134789999
Q gi|254780628|r  129 GVNRISLGVQSLE-EQSLRFLGRNHNASEAIAAIH  162 (395)
Q Consensus       129 Gv~RiS~GvQs~~-~~~l~~~~R~~~~~~~~~~~~  162 (395)
                       ++.+    =.++ |++++..+...+..++.+..+
T Consensus       147 -~D~~----Ivi~Nd~L~~~~~~~~~~~~AF~~ad  176 (194)
T d1w5fa1         147 -VDTL----IKISNNKLMEELPRDVKIKDAFLKAD  176 (194)
T ss_dssp             -CSEE----EEEEHHHHHTTSCTTCCHHHHHHHHH
T ss_pred             -HHHH----HEEHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf             -3154----03238789875179998999999999


No 172
>d1rpxa_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=20.67  E-value=20  Score=13.25  Aligned_cols=181  Identities=18%  Similarity=0.195  Sum_probs=82.4

Q ss_pred             HHHHHHHHHHHHHCCCEEEEEEECCCC--CCC-CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHCC
Q ss_conf             999999999876189505899962888--887-89999999997664047644433211332104100-23477663034
Q gi|254780628|r   54 SFLTEMQWMRQLTGPRSISSIFFGGGT--PSL-IEPQNIALILDGIAKNWTVSSNVEITIEANPSSVE-VNNFQGYRKAG  129 (395)
Q Consensus        54 ~l~~Ei~~~~~~~~~~~~~~iy~GGGT--Ps~-l~~~~l~~ll~~i~~~~~~~~~~e~t~E~~P~~~~-~~~l~~l~~~G  129 (395)
                      .|.+|++.+.+.  +...=-+=+--|+  |++ ++++.    ++.+++...+.      ++.|--..+ ...+..+.+.|
T Consensus        24 ~l~~~i~~l~~~--g~d~iHiDImDG~Fvpn~t~~~~~----v~~i~~~t~~~------~dvHLMv~~P~~~i~~~~~~g   91 (230)
T d1rpxa_          24 KLGEQVKAIEQA--GCDWIHVDVMDGRFVPNITIGPLV----VDSLRPITDLP------LDVHLMIVEPDQRVPDFIKAG   91 (230)
T ss_dssp             GHHHHHHHHHHT--TCCCEEEEEEBSSSSSCBCCCHHH----HHHHGGGCCSC------EEEEEESSSHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHC--CCCEEEEECCCCCCCCCCCCCHHH----HHHHHHCCCCE------EEEEEEECCHHHHHHHHHHCC
T ss_conf             999999999974--999899967469717765528578----76655335750------645333220666678875325


Q ss_pred             CCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEE
Q ss_conf             54114323433201345542244313478999986302444333210002585432211127887531800123464688
Q gi|254780628|r  130 VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMTQWEMELQRALSYAVDHLSLYQLTI  209 (395)
Q Consensus       130 v~RiS~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli~GlPgqt~e~~~~~l~~~~~l~p~~is~Y~l~i  209 (395)
                      +++|++=+++.+..            ++.+.++.+++.+..+.+=|   -|....+.+..-+.     ..|.|.+  +.+
T Consensus        92 ~~~i~~H~E~~~~~------------~~~~~i~~ik~~g~k~Gial---np~T~~~~l~~~l~-----~vD~Vll--M~V  149 (230)
T d1rpxa_          92 ADIVSVHCEQSSTI------------HLHRTINQIKSLGAKAGVVL---NPGTPLTAIEYVLD-----AVDLVLI--MSV  149 (230)
T ss_dssp             CSEEEEECSTTTCS------------CHHHHHHHHHHTTSEEEEEE---CTTCCGGGGTTTTT-----TCSEEEE--ESS
T ss_pred             CCEEEEECCCCCCC------------CHHHHHHHHHHCCCEEEEEE---CCCCCHHHHHHHHH-----HCCEEEE--EEE
T ss_conf             62257732223530------------59999999998698599996---79998799999996-----5798999--873


Q ss_pred             ECCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCC--CCCCCEEECCCCC
Q ss_conf             259600014544980211035678899986557887096242367434310110133211--2444123204320
Q gi|254780628|r  210 EKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHAYEISNHSFLGAESLHNLNY--WRYGDYIGIGPGA  282 (395)
Q Consensus       210 ~~~t~l~~~~~~~~~~~p~~~~~~~~~~~a~e~L~~~GY~~Yeis~fak~~~~s~hn~~Y--w~~~d~iG~G~GA  282 (395)
                      .||..       |+.-.|.   ..+.-..+.+++.+.++.- .+.   -.|.-...|..-  -.|.|.+=.|.+-
T Consensus       150 ~PGf~-------GQ~f~~~---~~~kI~~~~~~~~~~~~~~-~I~---vDGGIn~~~i~~l~~~Gad~~V~GS~i  210 (230)
T d1rpxa_         150 NPGFG-------GQSFIES---QVKKISDLRKICAERGLNP-WIE---VDGGVGPKNAYKVIEAGANALVAGSAV  210 (230)
T ss_dssp             CTTCS-------SCCCCTT---HHHHHHHHHHHHHHHTCCC-EEE---EESSCCTTTHHHHHHHTCCEEEESHHH
T ss_pred             CCCCC-------CCHHHHH---HHHHHHHHHHHHHHCCCCE-EEE---EECCCCHHHHHHHHHCCCCEEEECHHH
T ss_conf             68864-------2001356---6899999877777537734-899---987768999999997699999988698


No 173
>d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]}
Probab=20.64  E-value=20  Score=13.25  Aligned_cols=132  Identities=13%  Similarity=-0.017  Sum_probs=61.4

Q ss_pred             CCCCCHHHHHHHHHH-CCCCCEEE--ECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC-CC---CC
Q ss_conf             104100234776630-34541143--2343320134554224431347899998630244433321000258-54---32
Q gi|254780628|r  113 NPSSVEVNNFQGYRK-AGVNRISL--GVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPK-QT---MT  185 (395)
Q Consensus       113 ~P~~~~~~~l~~l~~-~Gv~RiS~--GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli~GlPg-qt---~e  185 (395)
                      -|+.++++.+..|++ .|+|-|-+  +++...-.    .+ ..-.+.+.++++.+.+.+..|=+|+=---++ ++   .+
T Consensus        48 ~~~~~~~~~~~~l~~~~G~N~VRlp~~~~~~~~~----~~-~~~~~~ld~~V~~a~~~GiyVIlD~H~~~~~~~~~~~~~  122 (357)
T d1g01a_          48 FGEIVNENAFVALSNDWGSNMIRLAMYIGENGYA----TN-PEVKDLVYEGIELAFEHDMYVIVDWHVHAPGDPRADVYS  122 (357)
T ss_dssp             HGGGCSHHHHHHHHTTSCCSEEEEEEESSSSSTT----TC-TTHHHHHHHHHHHHHHTTCEEEEEEECCSSSCTTSGGGT
T ss_pred             CCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCC----CC-HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHH
T ss_conf             4655689999999986499779886365578874----49-899999999999999789889986132688888803556


Q ss_pred             CCCCCHHHHH-HC--CCC-CEEEEEEEEECCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             2111278875-31--800-12346468825960001454498021103567889998655788709624
Q gi|254780628|r  186 QWEMELQRAL-SY--AVD-HLSLYQLTIEKGTLFYKMHKDGDLVLPSENVAVDLYNLTQSITSAHGLHA  250 (395)
Q Consensus       186 ~~~~~l~~~~-~l--~p~-~is~Y~l~i~~~t~l~~~~~~~~~~~p~~~~~~~~~~~a~e~L~~~GY~~  250 (395)
                      .+..--..+. .+  .|. .+-.|.|.-||...-........ ....-.....+++.+.+..++.+-..
T Consensus       123 ~~~~~W~~iA~ry~~~~~~~~v~~el~NEP~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~IR~~~~~~  190 (357)
T d1g01a_         123 GAYDFFEEIADHYKDHPKNHYIIWELANEPSPNNNGGPGLTN-DEKGWEAVKEYAEPIVEMLREKGDNM  190 (357)
T ss_dssp             THHHHHHHHHHHHTTCTTGGGEEEECCSCCCSCCTTSCCCCS-SHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHCCCCE
T ss_conf             667799999999754762379999875163535676545667-61368999999999999998539934


No 174
>d1lv3a_ g.39.1.9 (A:) Hypothetical zinc finger protein YacG {Escherichia coli [TaxId: 562]}
Probab=20.55  E-value=7.2  Score=16.26  Aligned_cols=14  Identities=43%  Similarity=1.099  Sum_probs=7.7

Q ss_pred             ECCCCCCCCCCCCC
Q ss_conf             40651183765773
Q gi|254780628|r   24 HWPFCVKKCPYCDF   37 (395)
Q Consensus        24 hiPFC~~~C~yC~f   37 (395)
                      +-|||-.||.-=|+
T Consensus        24 ~rPFCS~RCk~IDL   37 (65)
T d1lv3a_          24 FRPFCSKRCQLIDL   37 (65)
T ss_dssp             CCSSSSHHHHHHHH
T ss_pred             CCCCHHHHHHHCCH
T ss_conf             58725476600508


No 175
>d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]}
Probab=20.53  E-value=21  Score=13.23  Aligned_cols=19  Identities=11%  Similarity=-0.071  Sum_probs=8.6

Q ss_pred             CCCCHHHHHHCCCCCEEEE
Q ss_conf             1112788753180012346
Q gi|254780628|r  187 WEMELQRALSYAVDHLSLY  205 (395)
Q Consensus       187 ~~~~l~~~~~l~p~~is~Y  205 (395)
                      +.+..+.+.++.|++...|
T Consensus       137 ~~~~~~~~k~~D~tRp~~~  155 (297)
T d1yq2a5         137 LAAMAAWAHARDSSRPVHY  155 (297)
T ss_dssp             HHHHHHHHHHHCTTSCEEC
T ss_pred             HHHHHHHHHHHCCCCCCCC
T ss_conf             9999999988506885201


No 176
>d1vqou1 g.39.1.6 (U:4-56) Ribosomal protein L24e {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=20.38  E-value=15  Score=14.12  Aligned_cols=17  Identities=18%  Similarity=0.538  Sum_probs=11.1

Q ss_pred             CCCCCCCCEEEECCCCC
Q ss_conf             83765773024578866
Q gi|254780628|r   30 KKCPYCDFNSHVRRYKV   46 (395)
Q Consensus        30 ~~C~yC~f~~~~~~~~~   46 (395)
                      ..|+||++..++..+..
T Consensus         1 r~CsF~g~~I~PG~G~~   17 (53)
T d1vqou1           1 RECDYCGTDIEPGTGTM   17 (53)
T ss_dssp             CBCTTTCCBCCTTCCEE
T ss_pred             CCCCCCCCEECCCCCEE
T ss_conf             95104698456987889


Done!