RPSBLAST alignment for GI: 254780628 and conserved domain: TIGR00538
>gnl|CDD|129629 TIGR00538, hemN, oxygen-independent coproporphyrinogen III oxidase. This model represents HemN, the oxygen-independent coproporphyrinogen III oxidase that replaces HemF function under anaerobic conditions. Several species, including E. coli, Helicobacter pylori, and Aquifex aeolicus, have both a member of this family and a member of another, closely related family for which there is no evidence of coproporphyrinogen III oxidase activity. Members of this family have a perfectly conserved motif PYRT[SC]YP in a region N-terminal to the region of homology with the related uncharacterized protein. Length = 455
Score = 117 bits (294), Expect = 7e-27
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 3/212 (1%)
Query: 19 LGVYVHWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQL-TGPRSISSIFFG 77
L +YVH PFC K C +C N + R K + ++ + E+ + L G R +S + +G
Sbjct: 50 LSLYVHIPFCHKACYFCGCNVIITRQKHKADPYLDALEKEIALVAPLFDGNRHVSQLHWG 109
Query: 78 GGTPSLIEPQNIALILDGIAKNWTVSSNVEITIEANPSSVEVNNFQGYRKAGVNRISLGV 137
GGTP+ + P+ I+ ++ I +N+ +++ EI+IE +P + + R G NR+S GV
Sbjct: 110 GGTPTYLSPEQISRLMKLIRENFPFNADAEISIEIDPRYITKDVIDALRDEGFNRLSFGV 169
Query: 138 QSLEEQSLRFLGRNHNASEAIAAIHLARNI-FPRMSFDLIYALPKQTMTQWEMELQRALS 196
Q ++ + + R ++ AR F ++ DLIY LPKQT + L++
Sbjct: 170 QDFNKEVQQAVNRIQPEEMIFELMNHAREAGFTSINIDLIYGLPKQTKESFAKTLEKVAE 229
Query: 197 YAVDHLSLYQLTIEKGTLFYKMHKDGDLVLPS 228
D L+++ + K + LPS
Sbjct: 230 LNPDRLAVFNYA-HVPWVKPAQRKIPEAALPS 260