HHsearch alignment of GI: 254780629 and MMDB domain: 1b78_A_
>1b78_A (A:) Pyrophosphatase; structural genomics, hyperthermal protein; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=0 Score=398.58 Aligned_cols=189 Identities=30% Similarity=0.395 Sum_probs=167.9
Q ss_pred CCCC--CCCEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHHH
Q ss_conf 9665--67779998499227999999730079199724447885666676554567787653311345630785201243
Q gi|254780629|r 1 MRKL--IENNIVIASHNVDKIHEMDSLIMPLGIMTTSALELNLIIPEETGNSFEENAMIKSLTAAKNAGMPALSDDSGLV 78 (224)
Q Consensus 1 m~~~--~~~kii~aT~N~~K~~E~~~iL~~~~i~~~~~~~~~~~~peE~g~tf~eNA~~KA~~~~~~~~~pvlaDDSGL~ 78 (224)
|++. ||++|+|||+|+||++|++++|.++++.++.+.+++ ++|++.||++||+.||++++++++.||||||||||
T Consensus 1 m~~~~~~m~ki~~aT~N~~K~~E~~~il~~~~~~~i~~~~~d---~~E~~~t~~enA~~KA~~~~~~~~~pvi~dDsGL~ 77 (193)
T 1b78_A 1 MQRTLGEIMKIYFATGNPNKIKEANIILKDLKDVEIEQIKIS---YPEIQGTLEEVAEFGAKWVYNILKKPVIVEDSGFF 77 (193)
T ss_dssp ---------CEEEECSCHHHHHHHHHHTTTCTTCCEEEECCC---CCCBSSCHHHHHHHHHHHHHHHHCSCEEEEEEEEE
T ss_pred CCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHCCCC---CCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCHHH
T ss_conf 963404740799988987899999998755787420213768---86446525677788899887521332785061114
Q ss_pred HHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEEEEECCC
Q ss_conf 43420144514344304578868889999998877752135677765068998620132342104564333249982641
Q gi|254780629|r 79 IDVLDGKPGIHSARWAESNTGERDFDMAMQKIENALRSKFAHDPAFRSAHFISVLSLAWPDGHVENFSGKVSGIIVWPPR 158 (224)
Q Consensus 79 vdaL~G~PGvySaR~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~R~A~f~~~~~~~~~~~~~~~f~G~~~G~I~~~pr 158 (224)
|+||||+|||||+||++... .+++++.+.. .++|+|+|+|++|+++++ .+++|+|.++|.|+.+|+
T Consensus 78 i~aL~g~PG~ys~~~~~~~~--------~~~ll~~l~~-----~~~R~A~~~~~i~~~~~~-~~~~f~G~~~G~I~~~~~ 143 (193)
T 1b78_A 78 VEALNGFPGTYSKFVQETIG--------NEGILKLLEG-----KDNRNAYFKTVIGYCDEN-GVRLFKGIVKGRVSEEIR 143 (193)
T ss_dssp EGGGTTCEETTHHHHHHHTH--------HHHHHHHHTT-----CSCCEEEEEEEEEEEETT-EEEEEEEEEEEEECSSCC
T ss_pred HHHHHHHHHHHHHHHHHHCC--------CHHHHHHHHH-----HHHHHHHHHHHHHHCCCC-CEEEEEEEEEEEEEEEEC
T ss_conf 66775444566199887578--------5999998641-----012556750232320158-506898999999997006
Q ss_pred CC-CCCCCCEEEEECCCCCCHHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 17-8857231366569984777689878501212322233233435258999999999999876
Q gi|254780629|r 159 GQ-LGFGYDPIFQPNGYDRTFGEMTEEEKNGGIDSATLFSILSTDLLSHRARAFKCFVDNCLRI 221 (224)
Q Consensus 159 G~-~GFGyDpIF~p~g~~kT~aEm~~~eKn~~~~~~~~~~~~~~~~iSHR~~Al~kl~~~l~~~ 221 (224)
|. +||||||||+|+|+++|||||+.+|||+ ||||++|+++|+++|.+.
T Consensus 144 g~~~gfGyD~iF~p~g~~kT~aEl~~~eKn~---------------iShR~~Al~kl~~~l~~~ 192 (193)
T 1b78_A 144 SKGYGFAYDSIFIPEEEERTFAEMTTEEKSQ---------------ISHRKKAFEEFKKFLLDR 192 (193)
T ss_dssp CSSCCSGGGGSEEETTCSSCGGGSCHHHHTT---------------TSHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCCEEEECCCCCCCCCCCHHHHHH---------------CCHHHHHHHHHHHHHHHH
T ss_conf 8988988760588689996431199889444---------------499999999999999853