HHsearch alignment of GI: 254780629 and MMDB domain: 1ex2_A_

>1ex2_A (A:) Protein MAF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: SUC PO4; 1.85A {Bacillus subtilis}
Probab=93.89  E-value=0.35  Score=27.10  Aligned_cols=115  Identities=19%  Similarity=0.186  Sum_probs=63.9

Q ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCC--EEEEHHHCCCCCCCCCC----CCHHHHHHHHHHHHCCCC-CCEEEEECHHH
Q ss_conf             677799984992279999997300791--99724447885666676----554567787653311345-63078520124
Q gi|254780629|r    5 IENNIVIASHNVDKIHEMDSLIMPLGI--MTTSALELNLIIPEETG----NSFEENAMIKSLTAAKNA-GMPALSDDSGL   77 (224)
Q Consensus         5 ~~~kii~aT~N~~K~~E~~~iL~~~~i--~~~~~~~~~~~~peE~g----~tf~eNA~~KA~~~~~~~-~~pvlaDDSGL   77 (224)
                      |.++|++||+-+--.+    +|+.+|+  ++.+ .++  +|....+    .-....|..||+.+++.. +..+|+-|+-.
T Consensus         1 M~~~iILaS~Sp~R~~----lL~~~g~~f~v~~-~~i--dE~~~~~~~p~~~~~~lA~~KA~~v~~~~~~~~iI~aDtvv   73 (189)
T 1ex2_A            1 MTKPLILASQSPRRKE----LLDLLQLPYSIIV-SEV--EEKLNRNFSPEENVQWLAKQKAKAVADLHPHAIVIGADTMV   73 (189)
T ss_dssp             CCCCEEECCCCHHHHH----HHHTTCCCCEECC-CCC--CCCCCTTSCHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEEE
T ss_pred             CCCCEEEECCCHHHHH----HHHHCCCCEEEEC-CCC--CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECEEE
T ss_conf             9999999579999999----9997799819967-998--98999879989999999999999999678998699727499


Q ss_pred             HHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEE
Q ss_conf             343420144514344304578868889999998877752135677765068998620132342104564333
Q gi|254780629|r   78 VIDVLDGKPGIHSARWAESNTGERDFDMAMQKIENALRSKFAHDPAFRSAHFISVLSLAWPDGHVENFSGKV  149 (224)
Q Consensus        78 ~vdaL~G~PGvySaR~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~R~A~f~~~~~~~~~~~~~~~f~G~~  149 (224)
                      .   ++|..       .++..+.+   .+.+.+ ..+        ..+...+.|.+|+..++ ....+....
T Consensus        74 ~---~~~~i-------~~KP~~~~---eA~~~L-~~l--------sg~~h~v~T~v~i~~~~-~~~~~~~~t  122 (189)
T 1ex2_A           74 C---LDGEC-------LGKPQDQE---EAASML-RRL--------SGRSHSVITAVSIQAEN-HSETFYDKT  122 (189)
T ss_dssp             E---ETTEE-------ECCCSSHH---HHHHHH-HHH--------TTSEEEEEEEEEEEETT-EEEEEEEEE
T ss_pred             E---ECCEE-------ECCCCCHH---HHHHHH-HHH--------CCCCEEEEEEEEEEECC-EEEEEEEEE
T ss_conf             9---89999-------47999999---999999-982--------89966999999999899-899999999