Query gi|254780629|ref|YP_003065042.1| putative deoxyribonucleotide triphosphate pyrophosphatase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 224
No_of_seqs 123 out of 2560
Neff 6.5
Searched_HMMs 23785
Date Tue May 31 18:52:17 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780629.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1k7k_A Hypothetical protein YG 100.0 0 0 428.8 17.0 198 3-221 20-219 (221)
2 1vp2_A Putative xanthosine tri 100.0 0 0 413.7 14.6 194 2-224 11-205 (208)
3 1v7r_A Hypothetical protein PH 100.0 0 0 395.6 19.1 185 7-223 1-185 (186)
4 1b78_A Pyrophosphatase; struct 100.0 0 0 396.9 15.4 188 1-220 1-191 (193)
5 2car_A Inosine triphosphate py 100.0 0 0 396.0 14.5 188 3-222 6-195 (196)
6 2p5x_A ASMTL, N-acetylserotoni 96.1 0.058 2.4E-06 30.8 9.6 110 4-140 1-123 (230)
7 1ex2_A Protein MAF; structural 95.6 0.078 3.3E-06 30.0 8.7 106 5-139 1-113 (189)
8 3k7p_A Ribose 5-phosphate isom 88.3 0.92 3.9E-05 23.8 5.6 86 4-92 20-109 (179)
9 1zwy_A Hypothetical UPF0244 pr 86.4 0.99 4.2E-05 23.6 4.9 62 2-65 8-76 (185)
10 2amh_A Septum formation protei 85.6 1.9 7.9E-05 22.0 9.5 110 5-139 8-132 (207)
11 2vvr_A Ribose-5-phosphate isom 83.1 2.4 0.0001 21.3 7.0 82 6-92 1-86 (149)
12 3d3q_A TRNA delta(2)-isopenten 81.3 2.8 0.00012 20.9 7.7 85 1-85 1-116 (340)
13 3brc_A Conserved protein of un 79.5 0.99 4.2E-05 23.6 2.6 59 6-68 36-94 (156)
14 3exa_A TRNA delta(2)-isopenten 79.5 3.3 0.00014 20.6 7.0 81 5-85 1-112 (322)
15 2vvp_A Ribose-5-phosphate isom 71.3 5.4 0.00023 19.3 6.2 85 1-92 1-89 (162)
16 1u14_A Hypothetical UPF0244 pr 65.8 5.2 0.00022 19.4 3.6 58 6-65 2-66 (172)
17 3a8t_A Adenylate isopentenyltr 59.6 9.2 0.00039 17.9 5.5 78 6-83 39-147 (339)
18 2ppw_A Conserved domain protei 51.5 13 0.00053 17.1 7.1 83 6-91 3-94 (216)
19 3foz_A TRNA delta(2)-isopenten 48.7 11 0.00046 17.5 2.9 80 6-85 9-119 (316)
20 2wmy_A WZB, putative acid phos 47.6 12 0.0005 17.3 2.9 29 1-29 3-32 (150)
21 1srr_A SPO0F, sporulation resp 40.0 19 0.00081 16.1 3.6 32 4-35 1-32 (124)
22 2wja_A Putative acid phosphata 39.7 8.6 0.00036 18.1 1.2 29 1-29 21-50 (168)
23 3he8_A Ribose-5-phosphate isom 33.2 25 0.001 15.4 7.1 81 7-92 1-85 (149)
24 1c01_A Antimicrobial peptide 1 31.5 15 0.00062 16.8 1.3 15 157-171 61-75 (76)
25 3ono_A Ribose/galactose isomer 30.8 27 0.0011 15.2 7.6 84 6-92 3-94 (214)
26 3eph_A TRNA isopentenyltransfe 30.3 28 0.0012 15.1 6.3 77 10-86 7-112 (409)
27 2wsc_2 LHCA2, type II chloroph 28.9 14 0.00059 16.9 0.9 32 156-187 192-224 (269)
28 1o1x_A Ribose-5-phosphate isom 27.6 31 0.0013 14.9 7.4 82 6-92 12-97 (155)
29 3c5y_A Ribose/galactose isomer 26.5 33 0.0014 14.7 6.8 83 6-91 19-110 (231)
30 3ecd_A Serine hydroxymethyltra 23.8 11 0.00045 17.6 -0.5 43 131-173 110-153 (425)
31 2gkg_A Response regulator homo 20.3 43 0.0018 14.0 3.0 33 4-36 3-35 (127)
No 1
>1k7k_A Hypothetical protein YGGV; MAD, His-TAG, large groove, disordered Se-Met, structural genomics, putative ribosomal protein, PSI; HET: MSE; 1.50A {Escherichia coli} SCOP: c.51.4.1 PDB: 2q16_A* 2pyu_A*
Probab=100.00 E-value=0 Score=428.85 Aligned_cols=198 Identities=36% Similarity=0.539 Sum_probs=177.2
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHH
Q ss_conf 65677799984992279999997300791997244478856666765545677876533113456307852012434342
Q gi|254780629|r 3 KLIENNIVIASHNVDKIHEMDSLIMPLGIMTTSALELNLIIPEETGNSFEENAMIKSLTAAKNAGMPALSDDSGLVIDVL 82 (224)
Q Consensus 3 ~~~~~kii~aT~N~~K~~E~~~iL~~~~i~~~~~~~~~~~~peE~g~tf~eNA~~KA~~~~~~~~~pvlaDDSGL~vdaL 82 (224)
++.|+||+|||+|+||++|++.+|.+++++++++.++++++|+|++.||.+||++||+++++.++.|||||||||||+||
T Consensus 20 ~~~M~kI~~aT~N~~K~~E~~~iL~~~~i~i~~~~~~~i~~~eE~g~t~~enA~~KA~~~~~~~~~pvl~DDSGL~idAL 99 (221)
T 1k7k_A 20 QGHMQKVVLATGNVGKVRELASLLSDFGLDIVAQTDLGVDSAEETGLTFIENAILKARHAAKVTALPAIADDSGLAVDVL 99 (221)
T ss_dssp --CCEEEEESCCCHHHHHHHHHHHGGGTEEEEETTTTTCCCCCCCCSSHHHHHHHHHHHHHHHHSSCEEEEEEEEEEGGG
T ss_pred HCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEC
T ss_conf 57887899993998899999997313397898645509887567760068888998999987338986962626999851
Q ss_pred HCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCC--CCCCEEEEEEEEEEEEEECCCCC
Q ss_conf 0144514344304578868889999998877752135677765068998620132--34210456433324998264117
Q gi|254780629|r 83 DGKPGIHSARWAESNTGERDFDMAMQKIENALRSKFAHDPAFRSAHFISVLSLAW--PDGHVENFSGKVSGIIVWPPRGQ 160 (224)
Q Consensus 83 ~G~PGvySaR~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~R~A~f~~~~~~~~--~~~~~~~f~G~~~G~I~~~prG~ 160 (224)
||+|||||+||+++..++... +.+++..+.. ....+|+|+|+|++++++ +++.+++|+|.|+|+|+.+|||+
T Consensus 100 ~g~PGvysar~~~~~~~d~~~---~~~~l~~l~~---~~~~~r~a~f~~~~~~~~~~~~~~~~~f~G~~~G~I~~~prG~ 173 (221)
T 1k7k_A 100 GGAPGIYSARYSGEDATDQKN---LQKLLETMKD---VPDDQRQARFHCVLVYLRHAEDPTPLVCHGSWPGVITREPAGT 173 (221)
T ss_dssp TTCBGGGSTTTTCTTCCHHHH---HHHHHHHTTT---SCGGGCEEEEEEEEEEESSTTCSSCEEEEEEEEEEECSSCCCC
T ss_pred CCCCCHHHHHHHHHCCCHHHH---HHHHHHHHHC---CCCCCCEEEEEEEEEEECCCCCCEEEEEEEEEEEEEEECCCCC
T ss_conf 799701328887665878999---9999998637---9802024899999999726889807999999856996455589
Q ss_pred CCCCCCEEEEECCCCCCHHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 8857231366569984777689878501212322233233435258999999999999876
Q gi|254780629|r 161 LGFGYDPIFQPNGYDRTFGEMTEEEKNGGIDSATLFSILSTDLLSHRARAFKCFVDNCLRI 221 (224)
Q Consensus 161 ~GFGyDpIF~p~g~~kT~aEm~~~eKn~~~~~~~~~~~~~~~~iSHR~~Al~kl~~~l~~~ 221 (224)
+||||||||+|+|+++|||||+.+|||+ ||||++|+++|+++|...
T Consensus 174 ~GFGyDpIFip~g~~kTfaEm~~~eKn~---------------iSHR~~Al~kl~~~Lk~~ 219 (221)
T 1k7k_A 174 GGFGYDPIFFVPSEGKTAAELTREEKSA---------------ISHRGQALKLLLDALRNG 219 (221)
T ss_dssp SSSTTGGGEEEGGGTEEGGGSCHHHHHH---------------HSHHHHHHHHHHHHHHCC
T ss_pred CCCCCCEEEEECCCCCCHHHCCHHHHHH---------------CCHHHHHHHHHHHHHHHC
T ss_conf 9848782688799997653299989666---------------098999999999999855
No 2
>1vp2_A Putative xanthosine triphosphate pyrophosphatase/HAM1 protein homolog; TM0159; 1.78A {Thermotoga maritima} SCOP: c.51.4.1
Probab=100.00 E-value=0 Score=413.74 Aligned_cols=194 Identities=32% Similarity=0.507 Sum_probs=163.7
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHHHHHH
Q ss_conf 66567779998499227999999730079199724447885666676554567787653311345630785201243434
Q gi|254780629|r 2 RKLIENNIVIASHNVDKIHEMDSLIMPLGIMTTSALELNLIIPEETGNSFEENAMIKSLTAAKNAGMPALSDDSGLVIDV 81 (224)
Q Consensus 2 ~~~~~~kii~aT~N~~K~~E~~~iL~~~~i~~~~~~~~~~~~peE~g~tf~eNA~~KA~~~~~~~~~pvlaDDSGL~vda 81 (224)
+.|.+++|+|||+|+||++|++.+|.. .+.++... +..+++|++.||+|||++||++++++++.|||||||||||||
T Consensus 11 ~~mkkmkI~~aT~N~~K~~E~~~ll~~-~~~i~~~~--~~~d~~E~g~t~~eNA~~KA~~~~~~~~~pviaDDSGL~vda 87 (208)
T 1vp2_A 11 HHMKKLTVYLATTNPHKVEEIKMIAPE-WMEILPSP--EKIEVVEDGETFLENSVKKAVVYGKKLKHPVMADDSGLVIYS 87 (208)
T ss_dssp ----CEEEEESCCCHHHHHHHHTTCCT-TEEEEECS--SCCCCCCCCSSHHHHHHHHHHHHHHHHCSCEEEEEEEEEEGG
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEECC--CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCEEEEEE
T ss_conf 363567899995987999999998414-98884057--567877778788999999999999852898588637689963
Q ss_pred HHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCC-CCCEEEEEEEEEEEEEECCCCC
Q ss_conf 201445143443045788688899999988777521356777650689986201323-4210456433324998264117
Q gi|254780629|r 82 LDGKPGIHSARWAESNTGERDFDMAMQKIENALRSKFAHDPAFRSAHFISVLSLAWP-DGHVENFSGKVSGIIVWPPRGQ 160 (224)
Q Consensus 82 L~G~PGvySaR~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~R~A~f~~~~~~~~~-~~~~~~f~G~~~G~I~~~prG~ 160 (224)
|||+||||||||++....+.. +..++..+.. .+|+|+|.|+++++++ ++.+..|+|.|+|+|+.+|||+
T Consensus 88 L~g~PGvysar~~~~~~~~~~----~~~~l~~~~~------~~~~a~~~~~~~~~~~~~~~~~~~~G~~~G~I~~~~rG~ 157 (208)
T 1vp2_A 88 LGGFPGVMSARFMEEHSYKEK----MRTILKMLEG------KDRRAAFVCSATFFDPVENTLISVEDRVEGRIANEIRGT 157 (208)
T ss_dssp GTTEEGGGTTTTTTTSCHHHH----HHHHHHHTTT------SCCEEEEEEEEEEEETTTTEEEEEEEEEEEEECSSCCCS
T ss_pred CCCCCCHHHHHHHHCCCCHHH----HHHHHHHHCC------CCCCCCCEEEEEEEEEECCCCEEEEEEEEEEEEECCCCC
T ss_conf 069983112887641680067----8999886305------556533245799998505763478757646998603279
Q ss_pred CCCCCCEEEEECCCCCCHHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 8857231366569984777689878501212322233233435258999999999999876449
Q gi|254780629|r 161 LGFGYDPIFQPNGYDRTFGEMTEEEKNGGIDSATLFSILSTDLLSHRARAFKCFVDNCLRIDEK 224 (224)
Q Consensus 161 ~GFGyDpIF~p~g~~kT~aEm~~~eKn~~~~~~~~~~~~~~~~iSHR~~Al~kl~~~l~~~~e~ 224 (224)
+||||||||+|+|+++|||||+ ++||+ ||||++|+++|+++|.++.|+
T Consensus 158 ~GFGyDpIFip~g~~kTfAEm~-eeKn~---------------iSHR~kAl~kl~~~L~~~~e~ 205 (208)
T 1vp2_A 158 GGFGYDPFFIPDGYDKTFGEIP-HLKEK---------------ISHRSKAFRKLFSVLEKILES 205 (208)
T ss_dssp CSSTTGGGEEETTCSSCTTTCG-GGHHH---------------HSHHHHHHHHHHHHHHHHC--
T ss_pred CCCCCCCEEEECCCCCCHHHCH-HHHHH---------------CCHHHHHHHHHHHHHHHHHHH
T ss_conf 9888461899899996065098-87876---------------398999999999999999864
No 3
>1v7r_A Hypothetical protein PH1917; ntpase, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; HET: CIT; 1.40A {Pyrococcus horikoshii OT3} SCOP: c.51.4.1 PDB: 2dvn_A* 2dvo_A* 2dvp_A 2ehk_A 2zti_A 2e5x_A*
Probab=100.00 E-value=0 Score=395.59 Aligned_cols=185 Identities=33% Similarity=0.456 Sum_probs=164.6
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHCCC
Q ss_conf 77999849922799999973007919972444788566667655456778765331134563078520124343420144
Q gi|254780629|r 7 NNIVIASHNVDKIHEMDSLIMPLGIMTTSALELNLIIPEETGNSFEENAMIKSLTAAKNAGMPALSDDSGLVIDVLDGKP 86 (224)
Q Consensus 7 ~kii~aT~N~~K~~E~~~iL~~~~i~~~~~~~~~~~~peE~g~tf~eNA~~KA~~~~~~~~~pvlaDDSGL~vdaL~G~P 86 (224)
+||+|||+|+||++|++.+|.+++++++++ +.+.|++++.++++||..||++++++++.|+||||||||||||||+|
T Consensus 1 Mki~~aT~N~~K~~E~~~lL~~~~i~~~~~---~~~~~e~~~~~~~~~a~~ka~~~~~~~~~p~iaDDSGL~vdaL~g~P 77 (186)
T 1v7r_A 1 MKIFFITSNPGKVREVANFLGTFGIEIVQL---KHEYPEIQAEKLEDVVDFGISWLKGKVPEPFMIEDSGLFIESLKGFP 77 (186)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTTTCEEEEE---CCCCCCCCCSSHHHHHHHHHHHHTTTSCSSEEEEEEEEEEGGGTTTB
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEC---CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCEEEEHHHCCCC
T ss_conf 979998799899999999750649879866---87887778732899999999998886359678714568865318998
Q ss_pred CHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEEEEECCCCCCCCCCC
Q ss_conf 51434430457886888999999887775213567776506899862013234210456433324998264117885723
Q gi|254780629|r 87 GIHSARWAESNTGERDFDMAMQKIENALRSKFAHDPAFRSAHFISVLSLAWPDGHVENFSGKVSGIIVWPPRGQLGFGYD 166 (224)
Q Consensus 87 GvySaR~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~R~A~f~~~~~~~~~~~~~~~f~G~~~G~I~~~prG~~GFGyD 166 (224)
|||||||+... + .+.+...+. ...+|+|+|+|+++++. ++.+++|+|+|+|+|+.+|||++|||||
T Consensus 78 Gv~sar~~~~~----~----~~~l~~~l~-----~~~~r~a~~~~~~~~~~-~~~~~~~~G~~~G~I~~~~rG~~GFGyD 143 (186)
T 1v7r_A 78 GVYSSYVYRTI----G----LEGILKLME-----GAEDRRAYFKSVIGFYI-DGKAYKFSGVTWGRISNEKRGTHGFGYD 143 (186)
T ss_dssp GGGHHHHHHHT----H----HHHHHHHTT-----TCSCCEEEEEEEEEEEE-TTEEEEEEEEEEEEECSSCCCSSSCTTG
T ss_pred CCCCHHHHHHH----H----HHHHHHHHC-----CCCHHHHEEEEEEEECC-CCCEEEEEEEEEEEEEECCCCCCCCCCC
T ss_conf 54129988764----0----878999831-----74032220057898518-9845899989976897547789988858
Q ss_pred EEEEECCCCCCHHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 136656998477768987850121232223323343525899999999999987644
Q gi|254780629|r 167 PIFQPNGYDRTFGEMTEEEKNGGIDSATLFSILSTDLLSHRARAFKCFVDNCLRIDE 223 (224)
Q Consensus 167 pIF~p~g~~kT~aEm~~~eKn~~~~~~~~~~~~~~~~iSHR~~Al~kl~~~l~~~~e 223 (224)
|||+|+|+++|||||+.+|||+ ||||++|+++|+++|.+..+
T Consensus 144 piF~p~g~~kT~aEm~~~eKn~---------------iSHR~~A~~kl~~~L~~~l~ 185 (186)
T 1v7r_A 144 PIFIPEGSEKTFAEMTIEEKNA---------------LSHRGKALKAFFEWLKVNLK 185 (186)
T ss_dssp GGEEETTCSSCGGGSCHHHHHT---------------TSHHHHHHHHHHHHHHHHHC
T ss_pred CEEEECCCCCEEEECCHHHHHH---------------CCHHHHHHHHHHHHHHHHHC
T ss_conf 3699899997716599999755---------------49999999999999999737
No 4
>1b78_A Pyrophosphatase; structural genomics, hyperthermal protein; 2.20A {Methanocaldococcus jannaschii} SCOP: c.51.4.1 PDB: 2mjp_A*
Probab=100.00 E-value=0 Score=396.94 Aligned_cols=188 Identities=32% Similarity=0.440 Sum_probs=158.2
Q ss_pred CCCCC--CCEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHHH
Q ss_conf 96656--7779998499227999999730079199724447885666676554567787653311345630785201243
Q gi|254780629|r 1 MRKLI--ENNIVIASHNVDKIHEMDSLIMPLGIMTTSALELNLIIPEETGNSFEENAMIKSLTAAKNAGMPALSDDSGLV 78 (224)
Q Consensus 1 m~~~~--~~kii~aT~N~~K~~E~~~iL~~~~i~~~~~~~~~~~~peE~g~tf~eNA~~KA~~~~~~~~~pvlaDDSGL~ 78 (224)
|++.+ |++|+|||+|+||++|++.+|.++++..+ ..++++.| |++.||+|||++||++++++++.||||||||||
T Consensus 1 ~~~~~~~mMkI~~aT~N~~K~~E~~~lL~~l~~~~~--~~~~~~~~-E~~~t~~enA~~Ka~~~~~~~~~pvlaDDSGL~ 77 (193)
T 1b78_A 1 MQRTLGEIMKIYFATGNPNKIKEANIILKDLKDVEI--EQIKISYP-EIQGTLEEVAEFGAKWVYNILKKPVIVEDSGFF 77 (193)
T ss_dssp ---------CEEEECSCHHHHHHHHHHTTTCTTCCE--EEECCCCC-CBSSCHHHHHHHHHHHHHHHHCSCEEEEEEEEE
T ss_pred CCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCE--ECCCCCCC-CCCCCHHHHHHHHHHHHHHCCCCCEEEECCEEE
T ss_conf 975426842899988987899999998866788520--00467888-668888999999898755304785788536798
Q ss_pred HHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEEEEECCC
Q ss_conf 43420144514344304578868889999998877752135677765068998620132342104564333249982641
Q gi|254780629|r 79 IDVLDGKPGIHSARWAESNTGERDFDMAMQKIENALRSKFAHDPAFRSAHFISVLSLAWPDGHVENFSGKVSGIIVWPPR 158 (224)
Q Consensus 79 vdaL~G~PGvySaR~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~R~A~f~~~~~~~~~~~~~~~f~G~~~G~I~~~pr 158 (224)
|+||||+|||||+||+... + . +.+...+. ...+|+|+|+|+++++++++ +.+|+|.|+|.|+.+|+
T Consensus 78 v~aL~g~PGiys~~~~~~~-~---~----~~~~~~l~-----~~~~r~a~f~~~~~~~~~~~-~~~f~G~~~G~I~~~~~ 143 (193)
T 1b78_A 78 VEALNGFPGTYSKFVQETI-G---N----EGILKLLE-----GKDNRNAYFKTVIGYCDENG-VRLFKGIVKGRVSEEIR 143 (193)
T ss_dssp EGGGTTCEETTHHHHHHHT-H---H----HHHHHHHT-----TCSCCEEEEEEEEEEEETTE-EEEEEEEEEEEECSSCC
T ss_pred EHHHCCCCCCEEHHHHHHC-C---C----HHHHHHHH-----CCCHHHHHHHHHHHHHCCCE-EEEEEEEEEEEEEEEEC
T ss_conf 7542299850227756647-8---6----99998740-----65236788988765411331-79852689999987336
Q ss_pred CCC-CCCCCEEEEECCCCCCHHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 178-85723136656998477768987850121232223323343525899999999999987
Q gi|254780629|r 159 GQL-GFGYDPIFQPNGYDRTFGEMTEEEKNGGIDSATLFSILSTDLLSHRARAFKCFVDNCLR 220 (224)
Q Consensus 159 G~~-GFGyDpIF~p~g~~kT~aEm~~~eKn~~~~~~~~~~~~~~~~iSHR~~Al~kl~~~l~~ 220 (224)
|.+ ||||||||+|+|+++|||||+.+|||+ ||||++|+++|+++|++
T Consensus 144 g~~~GfGyDpIFip~~~~kT~aEm~~~eKn~---------------iSHR~~Al~~l~~~L~e 191 (193)
T 1b78_A 144 SKGYGFAYDSIFIPEEEERTFAEMTTEEKSQ---------------ISHRKKAFEEFKKFLLD 191 (193)
T ss_dssp CSSCCSGGGGSEEETTCSSCGGGSCHHHHTT---------------TSHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCEEEECCCCCEEECCCHHHHHH---------------CCHHHHHHHHHHHHHHH
T ss_conf 5899989895698799994512299899767---------------49799999999999885
No 5
>2car_A Inosine triphosphate pyrophosphatase; hydrolase, inosine triphosphate pyrophosphohydrolase, inosine triphosphatase deficiency, ITP, IMP; 1.09A {Homo sapiens} SCOP: c.51.4.1 PDB: 2j4e_A* 2i5d_A
Probab=100.00 E-value=0 Score=396.00 Aligned_cols=188 Identities=30% Similarity=0.428 Sum_probs=158.6
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHH
Q ss_conf 65677799984992279999997300791997244478856666765545677876533113456307852012434342
Q gi|254780629|r 3 KLIENNIVIASHNVDKIHEMDSLIMPLGIMTTSALELNLIIPEETGNSFEENAMIKSLTAAKNAGMPALSDDSGLVIDVL 82 (224)
Q Consensus 3 ~~~~~kii~aT~N~~K~~E~~~iL~~~~i~~~~~~~~~~~~peE~g~tf~eNA~~KA~~~~~~~~~pvlaDDSGL~vdaL 82 (224)
+|++++|+|||+|+||++|++++|.+.....+...+ ++.| |.+.|+.|||++||++++++++.||||||||||||||
T Consensus 6 ~~~~kkIv~aT~N~~K~~E~~~ll~~~~~~~~~~~~--~d~~-E~~~~~~enA~~KA~~~~~~~~~~viaDDSGL~VdaL 82 (196)
T 2car_A 6 SLVGKKIVFVTGNAKKLEEVVQILGDKFPCTLVAQK--IDLP-EYQGEPDEISIQKCQEAVRQVQGPVLVEDTCLCFNAL 82 (196)
T ss_dssp HHTTCEEEEECSCHHHHHHHHHHHCTTCCSEEEEEC--CCCC-CBCSCHHHHHHHHHHHHHHHHSSCEEEEEEEEEEGGG
T ss_pred CCCCCEEEEEECCHHHHHHHHHHHHCCCCEEECCCC--CCCC-CCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHH
T ss_conf 345997999909889999999983150772312224--8999-8889859999999999898639958984211068675
Q ss_pred HCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCC--CCCEEEEEEEEEEEEEECCCCC
Q ss_conf 01445143443045788688899999988777521356777650689986201323--4210456433324998264117
Q gi|254780629|r 83 DGKPGIHSARWAESNTGERDFDMAMQKIENALRSKFAHDPAFRSAHFISVLSLAWP--DGHVENFSGKVSGIIVWPPRGQ 160 (224)
Q Consensus 83 ~G~PGvySaR~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~R~A~f~~~~~~~~~--~~~~~~f~G~~~G~I~~~prG~ 160 (224)
||+|||||+||+... + .+.++..+. ...+|+|+|+|++|++++ ++.+.+|+|.|+|.|+ +|||+
T Consensus 83 ~g~PGv~sar~~~~~----~----~~~l~~~l~-----~~~~r~a~~~~~~~l~~~~~~~~~~~f~G~~~G~I~-~~rG~ 148 (196)
T 2car_A 83 GGLPGPYIKWFLEKL----K----PEGLHQLLA-----GFEDKSAYALCTFALSTGDPSQPVRLFRGRTSGRIV-APRGC 148 (196)
T ss_dssp TTCEETTHHHHHHHH----H----HHHHHHTTT-----TCSCCEEEEEEEEEEECSCSSCCCEEEEEEEEEEEC-SCCSC
T ss_pred CCCCCHHHHHHHHHH----H----HHHHHHHHH-----CCCCCCHHEEEEEEEEEECCCCCEEEECCEECCEEE-CCCCC
T ss_conf 578307889999860----1----788999872-----764223010567888730478864788467888982-15678
Q ss_pred CCCCCCEEEEECCCCCCHHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 88572313665699847776898785012123222332334352589999999999998764
Q gi|254780629|r 161 LGFGYDPIFQPNGYDRTFGEMTEEEKNGGIDSATLFSILSTDLLSHRARAFKCFVDNCLRID 222 (224)
Q Consensus 161 ~GFGyDpIF~p~g~~kT~aEm~~~eKn~~~~~~~~~~~~~~~~iSHR~~Al~kl~~~l~~~~ 222 (224)
+||||||||+|+|+++|||||+.+|||. ||||++|+++|++||.++.
T Consensus 149 ~GFGYDpiFip~g~~kT~aEm~~~eKn~---------------iSHR~~A~~kl~~~l~~l~ 195 (196)
T 2car_A 149 QDFGWDPCFQPDGYEQTYAEMPKAEKNA---------------VSHRFRALLELQEYFGSLA 195 (196)
T ss_dssp TTSTTGGGEEETTCSSCTTTSCHHHHHH---------------HCHHHHHHHHHHHHHCSSC
T ss_pred CCCCCCCEEEECCCCCCHHHCCHHHHHH---------------CCHHHHHHHHHHHHHHHCC
T ss_conf 9999894798899994553099999855---------------3879999999999999700
No 6
>2p5x_A ASMTL, N-acetylserotonin O-methyltransferase-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 2.00A {Homo sapiens}
Probab=96.10 E-value=0.058 Score=30.77 Aligned_cols=110 Identities=15% Similarity=0.155 Sum_probs=59.7
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHCCC--EEEEHHHCCCCCCCCCCC----CHHHHHHHHHHHHCCCC-------CCEE
Q ss_conf 5677799984992279999997300791--997244478856666765----54567787653311345-------6307
Q gi|254780629|r 4 LIENNIVIASHNVDKIHEMDSLIMPLGI--MTTSALELNLIIPEETGN----SFEENAMIKSLTAAKNA-------GMPA 70 (224)
Q Consensus 4 ~~~~kii~aT~N~~K~~E~~~iL~~~~i--~~~~~~~~~~~~peE~g~----tf~eNA~~KA~~~~~~~-------~~pv 70 (224)
||+++|++||+-+--. .+|..+|+ ++++ .+++...+..... .-...|..||..+++.. +..|
T Consensus 1 l~~krlILASsSprR~----~lL~~~gi~f~v~~-~~iDE~~~~~~~~~p~~~~~~lA~~KA~~v~~~~~~~~~~~~~iV 75 (230)
T 2p5x_A 1 LLHKRVVLASASPRRQ----EILSNAGLRFEVVP-SKFKEKLDKASFATPYGYAMETAKQKALEVANRLYQKDLRAPDVV 75 (230)
T ss_dssp CTTSCEEECCCCHHHH----HHHHHTTCCCEECC-CCCCCCCCGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHSCCCSEE
T ss_pred CCCCCEEEECCCHHHH----HHHHHCCCCEEEEC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf 9989899954899999----99983899819956-998999875455986899999999987887877654037899889
Q ss_pred EEECHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCC
Q ss_conf 8520124343420144514344304578868889999998877752135677765068998620132342
Q gi|254780629|r 71 LSDDSGLVIDVLDGKPGIHSARWAESNTGERDFDMAMQKIENALRSKFAHDPAFRSAHFISVLSLAWPDG 140 (224)
Q Consensus 71 laDDSGL~vdaL~G~PGvySaR~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~R~A~f~~~~~~~~~~~ 140 (224)
|+-|+-++ ++|. ..++..+. +.+.+.| ..+. .|+..+.|.+|++.++.
T Consensus 76 I~aDTvv~---~~g~-------ilgKP~~~---~eA~~~L-~~ls--------Gk~H~v~T~v~l~~~~~ 123 (230)
T 2p5x_A 76 IGADTIVT---VGGL-------ILEKPVDK---QDAYRML-SRLS--------GREHSVFTGVAIVHCSS 123 (230)
T ss_dssp EEEEEEEE---ETTE-------EECCCSSH---HHHHHHH-HHHT--------TSEEEEEEEEEEEEEEE
T ss_pred EECCEEEE---ECCE-------EECCCCCH---HHHHHHH-HHHC--------CCCEEEEEEEEEEECCC
T ss_conf 96184999---8999-------84588999---9999999-9857--------99569998899750798
No 7
>1ex2_A Protein MAF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: SUC PO4; 1.85A {Bacillus subtilis} SCOP: c.51.4.2 PDB: 1exc_A*
Probab=95.64 E-value=0.078 Score=29.99 Aligned_cols=106 Identities=18% Similarity=0.124 Sum_probs=58.9
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCE--EEEHHHCCCCCCCCCCCCHH----HHHHHHHHHHCCC-CCCEEEEECHHH
Q ss_conf 6777999849922799999973007919--97244478856666765545----6778765331134-563078520124
Q gi|254780629|r 5 IENNIVIASHNVDKIHEMDSLIMPLGIM--TTSALELNLIIPEETGNSFE----ENAMIKSLTAAKN-AGMPALSDDSGL 77 (224)
Q Consensus 5 ~~~kii~aT~N~~K~~E~~~iL~~~~i~--~~~~~~~~~~~peE~g~tf~----eNA~~KA~~~~~~-~~~pvlaDDSGL 77 (224)
|+++|++||.-+--. ++|..+|+. +++ . +++|....+.+.. ..|..||+.+++. .+..||+=|+-+
T Consensus 1 m~~~lILaS~S~~R~----~lL~~~gi~f~v~~-~--~idE~~~~~~~p~~~~~~lA~~KA~~v~~~~~~~~Vi~aDtvv 73 (189)
T 1ex2_A 1 MTKPLILASQSPRRK----ELLDLLQLPYSIIV-S--EVEEKLNRNFSPEENVQWLAKQKAKAVADLHPHAIVIGADTMV 73 (189)
T ss_dssp CCCCEEECCCCHHHH----HHHHTTCCCCEECC-C--CCCCCCCTTSCHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEEE
T ss_pred CCCCEEEECCCHHHH----HHHHHCCCCCEEEC-C--CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECEEC
T ss_conf 999889975899999----99986899979968-9--9898888889989999999999999999758997388654010
Q ss_pred HHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCC
Q ss_conf 34342014451434430457886888999999887775213567776506899862013234
Q gi|254780629|r 78 VIDVLDGKPGIHSARWAESNTGERDFDMAMQKIENALRSKFAHDPAFRSAHFISVLSLAWPD 139 (224)
Q Consensus 78 ~vdaL~G~PGvySaR~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~R~A~f~~~~~~~~~~ 139 (224)
+ ++|.. .+...... .+.+.+ ..+ ..++-.+.|.+++...+
T Consensus 74 ~---~~~~i-------~~KP~~~~---~A~~~L-~~l--------sg~~h~v~t~v~l~~~~ 113 (189)
T 1ex2_A 74 C---LDGEC-------LGKPQDQE---EAASML-RRL--------SGRSHSVITAVSIQAEN 113 (189)
T ss_dssp E---ETTEE-------ECCCSSHH---HHHHHH-HHH--------TTSEEEEEEEEEEEETT
T ss_pred C---CCCEE-------ECCHHHHH---HHHHHH-HHH--------CCCCCEEEEEEEEEECC
T ss_conf 2---48603-------03425489---999999-995--------69972688899998658
No 8
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi strain cl brener} PDB: 3k7s_A* 3k7o_A* 3k8c_A*
Probab=88.26 E-value=0.92 Score=23.77 Aligned_cols=86 Identities=12% Similarity=0.134 Sum_probs=60.1
Q ss_pred CCCCEEEEECCCCCHH--HHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCC-CCCEEEEECHHHHHH
Q ss_conf 5677799984992279--9999973007919972444788566667655456778765331134-563078520124343
Q gi|254780629|r 4 LIENNIVIASHNVDKI--HEMDSLIMPLGIMTTSALELNLIIPEETGNSFEENAMIKSLTAAKN-AGMPALSDDSGLVID 80 (224)
Q Consensus 4 ~~~~kii~aT~N~~K~--~E~~~iL~~~~i~~~~~~~~~~~~peE~g~tf~eNA~~KA~~~~~~-~~~pvlaDDSGL~vd 80 (224)
+|.+||.|++-..|-- +++..+|...+.+++... ... . .++..+|-+.|..-|+.+.+. ...-++..-||+=+.
T Consensus 20 ~M~kkI~IgsDHaG~~lK~~l~~~L~~~g~ev~D~~-~G~-~-~~~~~DYpd~a~~va~~V~~~~~~~GIliCGtGiG~s 96 (179)
T 3k7p_A 20 HMTRRVAIGTDHPAFAIHENLILYVKEAGDEFVPVY-CGP-K-TAESVDYPDFASRVAEMVARKEVEFGVLAAGSGIGMS 96 (179)
T ss_dssp -CCEEEEEEECTGGGGGHHHHHHHHHHTCTTEEEEE-CSC-S-SSSCCCHHHHHHHHHHHHHTTSSSEEEEEESSSHHHH
T ss_pred CCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEECC-CCC-C-CCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHH
T ss_conf 788818998286289999999999998699799758-877-7-4566783789999999987404406899669962888
Q ss_pred -HHHCCCCHHHHH
Q ss_conf -420144514344
Q gi|254780629|r 81 -VLDGKPGIHSAR 92 (224)
Q Consensus 81 -aL~G~PGvySaR 92 (224)
+-|-+|||+.|-
T Consensus 97 IaANK~~GIRAal 109 (179)
T 3k7p_A 97 IAANKVPGVRAAL 109 (179)
T ss_dssp HHHHTSTTCCEEE
T ss_pred HHHHCCCCCEEEE
T ss_conf 8876489967863
No 9
>1zwy_A Hypothetical UPF0244 protein VC0702; hypothetical protein, structural genomics, PSI, protein structure initiative; 1.90A {Vibrio cholerae} SCOP: c.51.4.3 PDB: 1zno_A
Probab=86.43 E-value=0.99 Score=23.58 Aligned_cols=62 Identities=18% Similarity=0.158 Sum_probs=38.1
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHHHHHC----CCEEEEHHHCCCCCCCCCCCCHH---HHHHHHHHHHCCC
Q ss_conf 6656777999849922799999973007----91997244478856666765545---6778765331134
Q gi|254780629|r 2 RKLIENNIVIASHNVDKIHEMDSLIMPL----GIMTTSALELNLIIPEETGNSFE---ENAMIKSLTAAKN 65 (224)
Q Consensus 2 ~~~~~~kii~aT~N~~K~~E~~~iL~~~----~i~~~~~~~~~~~~peE~g~tf~---eNA~~KA~~~~~~ 65 (224)
++-.|+|+.++|.|+-|++=+++.|..+ .+++.+.. .+- -+.+|-.+.+ .=|+..|+.+.++
T Consensus 8 ~~~~m~kV~VGS~NPvKv~AV~~af~~~f~~~~~~v~~v~-V~S-GVs~QP~g~eET~~GA~NRA~~A~~~ 76 (185)
T 1zwy_A 8 KRRVMRKIIIASQNPAKVNAVRSAFSTVFPDQEWEFIGVS-VPS-EVADQPMSDEETKQGALNRVRNAKQR 76 (185)
T ss_dssp ---CCCEEEESCCCHHHHHHHHHHHHHHCTTCCCEEEECC-CCC-SSCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEC-CCC-CCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 7587669999169989999999999996799836999847-896-97999989899999999999999960
No 10
>2amh_A Septum formation protein MAF homologue, putative; domain alpha-beta motif, structural genomics, PSI, protein structure initiative; 2.00A {Trypanosoma brucei} SCOP: c.51.4.2
Probab=85.60 E-value=1.9 Score=21.96 Aligned_cols=110 Identities=10% Similarity=-0.016 Sum_probs=60.3
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHCC--CEEEEHHHCCCCCCCCCCCC----HHHHHHHHHHHHCCCC---------CCE
Q ss_conf 67779998499227999999730079--19972444788566667655----4567787653311345---------630
Q gi|254780629|r 5 IENNIVIASHNVDKIHEMDSLIMPLG--IMTTSALELNLIIPEETGNS----FEENAMIKSLTAAKNA---------GMP 69 (224)
Q Consensus 5 ~~~kii~aT~N~~K~~E~~~iL~~~~--i~~~~~~~~~~~~peE~g~t----f~eNA~~KA~~~~~~~---------~~p 69 (224)
.+++|++||+-+--.+=++++....+ +.+++. +++|-...+.+ -...|..||+.++++. ...
T Consensus 8 ~~~~iILASsSp~R~~lL~~~gg~~~~~f~v~~~---~iDE~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~~l 84 (207)
T 2amh_A 8 EIRTMIIGTSSAFRANVLREHFGDRFRNFVLLPP---DIDEKAYRAADPFELTESIARAKMKAVLEKARQHSPPISGPAI 84 (207)
T ss_dssp CCCEEEECCCCHHHHHHHHHHHTTTCSEEEECCC---CCCGGGCCCSSHHHHHHHHHHHHHHHHHHHHHTC------CEE
T ss_pred CCCCEEEECCCHHHHHHHHHCCCCCCCCEEEECC---CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
T ss_conf 1685999359999999999658667887699689---9987888889989999999999999999876654214689869
Q ss_pred EEEECHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCC
Q ss_conf 7852012434342014451434430457886888999999887775213567776506899862013234
Q gi|254780629|r 70 ALSDDSGLVIDVLDGKPGIHSARWAESNTGERDFDMAMQKIENALRSKFAHDPAFRSAHFISVLSLAWPD 139 (224)
Q Consensus 70 vlaDDSGL~vdaL~G~PGvySaR~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~R~A~f~~~~~~~~~~ 139 (224)
||+-|+=+ .++|. ..++..+.++ +.+ .+..+. .|.-.+.|.+|++..+
T Consensus 85 vI~aDtvv---~~~g~-------ilgKP~~~~e---A~~-~L~~ls--------G~~h~v~T~v~v~~~~ 132 (207)
T 2amh_A 85 ALTFDQVV---VKGDE-------VREKPLSTEQ---CRS-FIASYS--------GGGVRTVATYALCVVG 132 (207)
T ss_dssp EEEEEEEE---EETTE-------EECSCSSHHH---HHH-HHHHHT--------TSEEEEEEEEEEEETT
T ss_pred EEECCEEE---EECCE-------EECCCCCHHH---HHH-HHHHHC--------CCCEEEEEEEEEEECC
T ss_conf 99818899---96992-------7569899999---999-999978--------9928998789999879
No 11
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=83.14 E-value=2.4 Score=21.32 Aligned_cols=82 Identities=16% Similarity=0.165 Sum_probs=58.2
Q ss_pred CCEEEEECCCCC-HH-HHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCC-CCEEEEECHHHHH-HH
Q ss_conf 777999849922-79-99999730079199724447885666676554567787653311345-6307852012434-34
Q gi|254780629|r 6 ENNIVIASHNVD-KI-HEMDSLIMPLGIMTTSALELNLIIPEETGNSFEENAMIKSLTAAKNA-GMPALSDDSGLVI-DV 81 (224)
Q Consensus 6 ~~kii~aT~N~~-K~-~E~~~iL~~~~i~~~~~~~~~~~~peE~g~tf~eNA~~KA~~~~~~~-~~pvlaDDSGL~v-da 81 (224)
|+||.|+|-..| .+ .++..+|...+++++.+ .... ++..+|-+.|..-|+...+.- ..-++.+-||.=+ =+
T Consensus 1 mkkI~igsDhaG~~lK~~l~~~L~~~g~ev~D~---G~~~--~~~~DYpd~a~~~a~~v~~~~~~~GIliCGtG~G~sia 75 (149)
T 2vvr_A 1 MKKIAFGCDHVGFILKHEIVAHLVERGVEVIDK---GTWS--SERTDYPHYASQVALAVAGGEVDGGILICGTGVGISIA 75 (149)
T ss_dssp CCEEEEEECTTGGGGHHHHHHHHHHTTCEEEEC---CCCS--SSCCCHHHHHHHHHHHHHTTSSSEEEEEESSSHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEC---CCCC--CCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHH
T ss_conf 987999758707999999999999879989978---9983--55778407899999986057754258955898469998
Q ss_pred HHCCCCHHHHH
Q ss_conf 20144514344
Q gi|254780629|r 82 LDGKPGIHSAR 92 (224)
Q Consensus 82 L~G~PGvySaR 92 (224)
-|-+|||+.|.
T Consensus 76 ANK~~GIRAa~ 86 (149)
T 2vvr_A 76 ANKFAGIRAVV 86 (149)
T ss_dssp HHTSTTCCEEE
T ss_pred HHCCCCEEEEE
T ss_conf 72679989972
No 12
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=81.30 E-value=2.8 Score=20.91 Aligned_cols=85 Identities=14% Similarity=0.200 Sum_probs=60.9
Q ss_pred CCCCCCCEEEE--ECCCCCHHHHHHHHHHHCCCEEEEHHH------CCC----CCCCC------------------CCCC
Q ss_conf 96656777999--849922799999973007919972444------788----56666------------------7655
Q gi|254780629|r 1 MRKLIENNIVI--ASHNVDKIHEMDSLIMPLGIMTTSALE------LNL----IIPEE------------------TGNS 50 (224)
Q Consensus 1 m~~~~~~kii~--aT~N~~K~~E~~~iL~~~~i~~~~~~~------~~~----~~peE------------------~g~t 50 (224)
|..|.+.+|++ +..-.||-+=.-.+-..++.++++... ++| +.++| +...
T Consensus 1 m~~~~kp~li~i~GpTasGKT~la~~LA~~l~~eIIsaDS~QvYkgl~IgTaKps~~e~~~ipHhlid~~~p~e~~sv~~ 80 (340)
T 3d3q_A 1 MTEMTKPFLIVIVGPTASGKTELSIEVAKKFNGEIISGDSMQVYQGMDIGTAKVTTEEMEGIPHYMIDILPPDASFSAYE 80 (340)
T ss_dssp -----CCEEEEEECSTTSSHHHHHHHHHHHTTEEEEECCSSTTBTTCCTTTTCCCTTTTTTCCEESSSCBCTTSCCCHHH
T ss_pred CCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCHHHHCCCCCEEECCCCHHHHHCCCEEEEEEECCCCCCCHHH
T ss_conf 99888885699989771358999999999879989940238654999867699999999279976661377877703988
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEECHHHHHHHH-HCC
Q ss_conf 45677876533113456307852012434342-014
Q gi|254780629|r 51 FEENAMIKSLTAAKNAGMPALSDDSGLVIDVL-DGK 85 (224)
Q Consensus 51 f~eNA~~KA~~~~~~~~~pvlaDDSGL~vdaL-~G~ 85 (224)
|.+-|......+...-+.|+++=-|||+++|| +|.
T Consensus 81 f~~~a~~~i~~i~~~~kiPIlVGGTglYi~all~g~ 116 (340)
T 3d3q_A 81 FKKRAEKYIKDITRRGKVPIIAGGTGLYIQSLLYNY 116 (340)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHBCS
T ss_pred HHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCC
T ss_conf 777999999999975997199817088999998487
No 13
>3brc_A Conserved protein of unknown function; methanobacterium thermoautotrophicum, structural genomics, MCSG, PSI-2; 1.60A {Methanothermobacterthermautotrophicus str}
Probab=79.53 E-value=0.99 Score=23.57 Aligned_cols=59 Identities=15% Similarity=0.273 Sum_probs=38.6
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 777999849922799999973007919972444788566667655456778765331134563
Q gi|254780629|r 6 ENNIVIASHNVDKIHEMDSLIMPLGIMTTSALELNLIIPEETGNSFEENAMIKSLTAAKNAGM 68 (224)
Q Consensus 6 ~~kii~aT~N~~K~~E~~~iL~~~~i~~~~~~~~~~~~peE~g~tf~eNA~~KA~~~~~~~~~ 68 (224)
-++|+++|+|..|++-+..+|..++..-+...+ .|....+--.--|+.|+.-|...++.
T Consensus 36 Ak~ivV~t~N~kK~~vi~~il~~~~~~~~~~l~----i~Tn~aDlTRmPAi~K~lmAvD~sdA 94 (156)
T 3brc_A 36 ARRTVVPNWNAEKVDAINDVLRSFNLREAEHLQ----FNTNWADLTRMPAVTKALMALDISGA 94 (156)
T ss_dssp CSCEEECCCCHHHHHHHHHHHHHTTCCCCEECC----SCCGGGGGSSSHHHHHHHHHHHHHCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEE----CCCCCHHCCCCCHHHHHHHEEECCCC
T ss_conf 664998569706779999999981686300465----46760011137077644411423688
No 14
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=79.50 E-value=3.3 Score=20.56 Aligned_cols=81 Identities=17% Similarity=0.195 Sum_probs=57.3
Q ss_pred CCCEEEEE--CCCCCHHHHHHHHHHHCCCEEEEHHH------CCC--------------------CCCCC--CCCCHHHH
Q ss_conf 67779998--49922799999973007919972444------788--------------------56666--76554567
Q gi|254780629|r 5 IENNIVIA--SHNVDKIHEMDSLIMPLGIMTTSALE------LNL--------------------IIPEE--TGNSFEEN 54 (224)
Q Consensus 5 ~~~kii~a--T~N~~K~~E~~~iL~~~~i~~~~~~~------~~~--------------------~~peE--~g~tf~eN 54 (224)
|+++|++. ..=.||-+=.-.+-..++.++++... ++| .+|.| +...|.+-
T Consensus 1 mk~kii~I~GpTasGKS~la~~LA~~~~~eIIsaDS~QvYk~l~IgTaKps~~e~~~ipHhlid~~~p~e~~sv~~f~~~ 80 (322)
T 3exa_A 1 MKEKLVAIVGPTAVGKTKTSVMLAKRLNGEVISGDSMQVYRGMDIGTAKITAEEMDGVPHHLIDIKDPSESFSVADFQDL 80 (322)
T ss_dssp -CCEEEEEECCTTSCHHHHHHHHHHTTTEEEEECCGGGGBTTCCTTTTCCCHHHHTTCCEESSSCBCTTSCCCHHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEHHHHCCCCCEEECCCCHHHHHCCCEEEECCCCCCCCEEHHHHHHH
T ss_conf 99867999898721699999999998799699621276549997677899999990799774157378874229987878
Q ss_pred HHHHHHHHCCCCCCEEEEECHHHHHHHH-HCC
Q ss_conf 7876533113456307852012434342-014
Q gi|254780629|r 55 AMIKSLTAAKNAGMPALSDDSGLVIDVL-DGK 85 (224)
Q Consensus 55 A~~KA~~~~~~~~~pvlaDDSGL~vdaL-~G~ 85 (224)
|......+...-..|+++=-|||+++|| +|+
T Consensus 81 a~~~i~~i~~r~k~PIlVGGTglYl~aLl~g~ 112 (322)
T 3exa_A 81 ATPLITEIHERGRLPFLVGGTGLYVNAVIHQF 112 (322)
T ss_dssp HHHHHHHHHHTTCEEEEESCCHHHHHHHHHTC
T ss_pred HHHHHHHHHHCCCCEEEEECCHHHHHHHHCCC
T ss_conf 99999999976998099948388999998185
No 15
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=71.29 E-value=5.4 Score=19.28 Aligned_cols=85 Identities=8% Similarity=0.144 Sum_probs=56.5
Q ss_pred CCCCCCCEEEEECCCCC-HHHH-HHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCC-CCEEEEECHHH
Q ss_conf 96656777999849922-7999-999730079199724447885666676554567787653311345-63078520124
Q gi|254780629|r 1 MRKLIENNIVIASHNVD-KIHE-MDSLIMPLGIMTTSALELNLIIPEETGNSFEENAMIKSLTAAKNA-GMPALSDDSGL 77 (224)
Q Consensus 1 m~~~~~~kii~aT~N~~-K~~E-~~~iL~~~~i~~~~~~~~~~~~peE~g~tf~eNA~~KA~~~~~~~-~~pvlaDDSGL 77 (224)
|+. +||.|++-..| .+++ +..+|...+++++. +.... .+...+|-+.|..-|+.+.+.. ..-++.+-||+
T Consensus 1 m~~---MKI~igsDhaG~~lK~~l~~~L~~~g~ev~D---~G~~~-~~~~~dYpd~a~~va~~v~~~~~~~GIliCGtG~ 73 (162)
T 2vvp_A 1 MSG---MRVYLGADHAGYELKQRIIEHLKQTGHEPID---CGALR-YDADDDYPAFCIAAATRTVADPGSLGIVLGGSGN 73 (162)
T ss_dssp --C---CEEEEEECHHHHHHHHHHHHHHHHTTCEEEE---CSCCS-CCTTCCHHHHHHHHHHHHHHSTTCEEEEEESSSH
T ss_pred CCC---CEEEEEECCCHHHHHHHHHHHHHHCCCEEEE---CCCCC-CCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCH
T ss_conf 999---8999983880799999999999987998996---79986-6677872589999888743687777999868867
Q ss_pred HHH-HHHCCCCHHHHH
Q ss_conf 343-420144514344
Q gi|254780629|r 78 VID-VLDGKPGIHSAR 92 (224)
Q Consensus 78 ~vd-aL~G~PGvySaR 92 (224)
=+. +-|-+|||+.+.
T Consensus 74 G~siaANK~~GIRAa~ 89 (162)
T 2vvp_A 74 GEQIAANKVPGARCAL 89 (162)
T ss_dssp HHHHHHHTSTTCCEEE
T ss_pred HHHHHHCCCCCEEEEE
T ss_conf 7888861549989975
No 16
>1u14_A Hypothetical UPF0244 protein YJJX; structural genomics, protein structure initiative, PSI, midwest center for structural genomics, MCSG; 1.68A {Salmonella typhimurium} SCOP: c.51.4.3 PDB: 1u5w_A
Probab=65.85 E-value=5.2 Score=19.40 Aligned_cols=58 Identities=16% Similarity=0.048 Sum_probs=35.6
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHC----CCEEEEHHHCCCCCCCCCCCCHH---HHHHHHHHHHCCC
Q ss_conf 777999849922799999973007----91997244478856666765545---6778765331134
Q gi|254780629|r 6 ENNIVIASHNVDKIHEMDSLIMPL----GIMTTSALELNLIIPEETGNSFE---ENAMIKSLTAAKN 65 (224)
Q Consensus 6 ~~kii~aT~N~~K~~E~~~iL~~~----~i~~~~~~~~~~~~peE~g~tf~---eNA~~KA~~~~~~ 65 (224)
|+|++++|.|+-|++=+++.|..+ .+++.+.. .+- -+.+|--+.+ .=|+..|+.+.+.
T Consensus 2 m~kV~VgS~NpvKv~AV~~af~~~f~~~~~~v~~v~-v~S-gV~~QP~g~eEt~~GA~nRA~~a~~~ 66 (172)
T 1u14_A 2 MHQVISATTNPAKIQAILQAFEEIFGEGSCHITPVA-VES-GVPEQPFGSEETRAGARNRVDNARRL 66 (172)
T ss_dssp CEEEEESCCCHHHHHHHHHHHHHHHCTTCEEEEECC-CCC-SSCSSCBSHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEC-CCC-CCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 569999459989999999999996698836999963-698-97999988899999999999999973
No 17
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus}
Probab=59.62 E-value=9.2 Score=17.93 Aligned_cols=78 Identities=15% Similarity=0.163 Sum_probs=55.4
Q ss_pred CCEEEEE--CCCCCHHHHHHHHHHHCCCEEEEHHH------CCC--------------------CCCCC---CCCCHHHH
Q ss_conf 7779998--49922799999973007919972444------788--------------------56666---76554567
Q gi|254780629|r 6 ENNIVIA--SHNVDKIHEMDSLIMPLGIMTTSALE------LNL--------------------IIPEE---TGNSFEEN 54 (224)
Q Consensus 6 ~~kii~a--T~N~~K~~E~~~iL~~~~i~~~~~~~------~~~--------------------~~peE---~g~tf~eN 54 (224)
++||++. ..-.||-+=.-.+-+.++.++++... ++| .+|.+ +...|..-
T Consensus 39 k~kvI~I~GpTasGKT~lAi~LA~~l~~eIIsaDS~QvYk~ldIgTaKpt~~e~~~vpHhLid~v~p~~~~ysv~~f~~~ 118 (339)
T 3a8t_A 39 KEKLLVLMGATGTGKSRLSIDLAAHFPLEVINSDKMQVYKGLDITTNKISVPDRGGVPHHLLGEVDPARGELTPADFRSL 118 (339)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHTTSCEEEEECCSSTTBSSCTTTTTCCCSGGGTTCCEESSSCBCGGGCCCCHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCHHHCCCCCEEECCCCHHHHCCCCEEEEEEEECCCCEEEHHHHHHH
T ss_conf 88679998988428999999999987997995230642699974889999999838997999899737663559999999
Q ss_pred HHHHHHHHCCCCCCEEEEECHHHHHHHHH
Q ss_conf 78765331134563078520124343420
Q gi|254780629|r 55 AMIKSLTAAKNAGMPALSDDSGLVIDVLD 83 (224)
Q Consensus 55 A~~KA~~~~~~~~~pvlaDDSGL~vdaL~ 83 (224)
|......+...-+.|+|+=-|||+++||=
T Consensus 119 A~~~I~~i~~rgkiPIlVGGTglYl~ALL 147 (339)
T 3a8t_A 119 AGKAVSEITGRRKLPVLVGGSNSFIHALL 147 (339)
T ss_dssp HHHHHHHHHHTTCEEEEECCCHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEECCCHHHHHHHH
T ss_conf 99999999848996499757207889886
No 18
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein structure initiative, MCSG, structural genomics; HET: MSE; 2.01A {Streptococcus pneumoniae TIGR4}
Probab=51.48 E-value=13 Score=17.14 Aligned_cols=83 Identities=12% Similarity=0.154 Sum_probs=59.1
Q ss_pred CCEEEEECCCCC------HHHHHHHHHHHCCCEEEEHHHCCCCCCC-CCCCCHHHHHHHHHHHHCC-CCCCEEEEECHHH
Q ss_conf 777999849922------7999999730079199724447885666-6765545677876533113-4563078520124
Q gi|254780629|r 6 ENNIVIASHNVD------KIHEMDSLIMPLGIMTTSALELNLIIPE-ETGNSFEENAMIKSLTAAK-NAGMPALSDDSGL 77 (224)
Q Consensus 6 ~~kii~aT~N~~------K~~E~~~iL~~~~i~~~~~~~~~~~~pe-E~g~tf~eNA~~KA~~~~~-~~~~pvlaDDSGL 77 (224)
.+||-+++-|.+ =+++++.++.+.|.+++.. ....++ ....||.+++..=|+.... ....-++..-||.
T Consensus 3 ~MKIal~~d~s~~~~n~~I~e~Lk~~l~~~G~eV~D~---G~~s~e~~~~~dYpd~~~~~A~~v~sg~~d~gIl~CGTG~ 79 (216)
T 2ppw_A 3 AMKIALINENSQASKNHIIYDSLKEATDKKGYQLFNY---GMRGEEGESQLTYVQNGLMAAILLNTKAVDFVVTGCGTGV 79 (216)
T ss_dssp CCEEEECCCTTTGGGHHHHHHHHHHHHHHHTCEEEEC---SCCSCTTCCCCCHHHHHHHHHHHHHTTSCSEEEEEESSSH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEC---CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCH
T ss_conf 7179986565016689999999999998679989965---7898765777880799999999997699877999778888
Q ss_pred HH-HHHHCCCCHHHH
Q ss_conf 34-342014451434
Q gi|254780629|r 78 VI-DVLDGKPGIHSA 91 (224)
Q Consensus 78 ~v-daL~G~PGvySa 91 (224)
=+ =+.|-+|||+.+
T Consensus 80 G~~iaANK~pGVraa 94 (216)
T 2ppw_A 80 GAMLALNSFPGVVCG 94 (216)
T ss_dssp HHHHHHTTSTTCCEE
T ss_pred HHHHHHHCCCCEEEE
T ss_conf 999998489985999
No 19
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferase; nucleoside modification, isopentenyl-tRNA transferase, MIAA, transferase/RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=48.70 E-value=11 Score=17.50 Aligned_cols=80 Identities=15% Similarity=0.181 Sum_probs=55.2
Q ss_pred CCEEEE--ECCCCCHHHHHHHHHHHCCCEEEEHHH------CCC--------------------CCCCC--CCCCHHHHH
Q ss_conf 777999--849922799999973007919972444------788--------------------56666--765545677
Q gi|254780629|r 6 ENNIVI--ASHNVDKIHEMDSLIMPLGIMTTSALE------LNL--------------------IIPEE--TGNSFEENA 55 (224)
Q Consensus 6 ~~kii~--aT~N~~K~~E~~~iL~~~~i~~~~~~~------~~~--------------------~~peE--~g~tf~eNA 55 (224)
+.++++ ...-.||-+=.-.+-+.++-++++... ++| .+|.| +...|..-|
T Consensus 9 ~p~vi~I~GpTasGKs~La~~lA~~~~~eIIs~DS~QvYk~l~IgTaKp~~~e~~~i~Hhlid~~~p~e~~sv~~f~~~a 88 (316)
T 3foz_A 9 LPKAIFLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDA 88 (316)
T ss_dssp CCEEEEEECCTTSCHHHHHHHHHHHSCEEEEECCTTTTBTTCCTTTTCCCHHHHHHSCEETSSCBCTTSCCCHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCHHHHHCCCCEEECCCCHHHHHCCCEEEECCCCCCCCEEHHHHHHHH
T ss_conf 99569998988327999999999986997994026876199987778999999927997774566888755299999999
Q ss_pred HHHHHHHCCCCCCEEEEECHHHHHHHH-HCC
Q ss_conf 876533113456307852012434342-014
Q gi|254780629|r 56 MIKSLTAAKNAGMPALSDDSGLVIDVL-DGK 85 (224)
Q Consensus 56 ~~KA~~~~~~~~~pvlaDDSGL~vdaL-~G~ 85 (224)
..........-+.|+++=-|||++.|| +|.
T Consensus 89 ~~~i~~i~~~~k~pIlVGGTglYl~all~g~ 119 (316)
T 3foz_A 89 LAEMADITAAGRIPLLVGGTMLYFKALLEGL 119 (316)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHHSCC
T ss_pred HHHHHHHHHCCCCCEEECCCHHHHHHHHCCC
T ss_conf 9899999965997089735178999998298
No 20
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=47.59 E-value=12 Score=17.29 Aligned_cols=29 Identities=24% Similarity=0.332 Sum_probs=22.0
Q ss_pred CCCCCCCEEEEE-CCCCCHHHHHHHHHHHC
Q ss_conf 966567779998-49922799999973007
Q gi|254780629|r 1 MRKLIENNIVIA-SHNVDKIHEMDSLIMPL 29 (224)
Q Consensus 1 m~~~~~~kii~a-T~N~~K~~E~~~iL~~~ 29 (224)
|-++|.++|+|+ |+|.---.=++.+|+.+
T Consensus 3 m~~~m~~~ILfVC~gN~cRSpmAE~i~~~~ 32 (150)
T 2wmy_A 3 MAKLMFDSILVICTGNICRSPIGERLLRRL 32 (150)
T ss_dssp ----CCCEEEEEESSSSSHHHHHHHHHHHH
T ss_pred HHHHHCCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 657634909999089478999999999986
No 21
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=40.00 E-value=19 Score=16.08 Aligned_cols=32 Identities=13% Similarity=0.177 Sum_probs=28.2
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHCCCEEEE
Q ss_conf 56777999849922799999973007919972
Q gi|254780629|r 4 LIENNIVIASHNVDKIHEMDSLIMPLGIMTTS 35 (224)
Q Consensus 4 ~~~~kii~aT~N~~K~~E~~~iL~~~~i~~~~ 35 (224)
||++||+++-.|+.=..-++.+|...|+.+..
T Consensus 1 mm~~rILiVDD~~~~~~~l~~~L~~~g~~v~~ 32 (124)
T 1srr_A 1 MMNEKILIVDDQSGIRILLNEVFNKEGYQTFQ 32 (124)
T ss_dssp --CCEEEEECSCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEE
T ss_conf 99885999979999999999999986998999
No 22
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=39.67 E-value=8.6 Score=18.11 Aligned_cols=29 Identities=24% Similarity=0.332 Sum_probs=21.0
Q ss_pred CCCCCCCEEEEE-CCCCCHHHHHHHHHHHC
Q ss_conf 966567779998-49922799999973007
Q gi|254780629|r 1 MRKLIENNIVIA-SHNVDKIHEMDSLIMPL 29 (224)
Q Consensus 1 m~~~~~~kii~a-T~N~~K~~E~~~iL~~~ 29 (224)
|+++|.++|+|+ |+|.--=.=++.+|+.+
T Consensus 21 ~~~~m~~~ILFVCtgNicRSpmAEail~~~ 50 (168)
T 2wja_A 21 MAKLMFDSILVICTGNICRSPIGERLLRRL 50 (168)
T ss_dssp HHHHHCSEEEEEESSSSSHHHHHHHHHHHH
T ss_pred HHHHHCCEEEEEECCCHHHHHHHHHHHHHC
T ss_conf 767751828999289567999999999974
No 23
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization, X-RAY crystallography; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=33.19 E-value=25 Score=15.43 Aligned_cols=81 Identities=15% Similarity=0.167 Sum_probs=55.8
Q ss_pred CEEEEECCCCC-HHH-HHHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCC-CCEEEEECHHHHHH-HH
Q ss_conf 77999849922-799-9999730079199724447885666676554567787653311345-63078520124343-42
Q gi|254780629|r 7 NNIVIASHNVD-KIH-EMDSLIMPLGIMTTSALELNLIIPEETGNSFEENAMIKSLTAAKNA-GMPALSDDSGLVID-VL 82 (224)
Q Consensus 7 ~kii~aT~N~~-K~~-E~~~iL~~~~i~~~~~~~~~~~~peE~g~tf~eNA~~KA~~~~~~~-~~pvlaDDSGL~vd-aL 82 (224)
+||.+++--.| .++ ++..+|...+++++.+ ... .++..+|-+.|..-|+.+.+.. ..-++.+-||.=+. +.
T Consensus 1 MkI~igsDhaG~~lK~~l~~~L~~~g~~V~D~---G~~--~~~~~DYpd~a~~va~~v~~~~~~~GIliCGtG~G~~iaA 75 (149)
T 3he8_A 1 MKIGIGSDHGGYNLKREIADFLKKRGYEVIDF---GTH--GNESVDYPDFGLKVAEAVKSGECDRGIVICGTGLGISIAA 75 (149)
T ss_dssp CEEEEEECGGGHHHHHHHHHHHHHTTCEEEEC---CCC--SSSCCCHHHHHHHHHHHHHTTSSSEEEEEESSSHHHHHHH
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHCCCEEEEC---CCC--CCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHH
T ss_conf 98999958856999999999999889968978---998--6667782789999999997589756999868766477765
Q ss_pred HCCCCHHHHH
Q ss_conf 0144514344
Q gi|254780629|r 83 DGKPGIHSAR 92 (224)
Q Consensus 83 ~G~PGvySaR 92 (224)
|-+|||+.+.
T Consensus 76 NK~~GIRAa~ 85 (149)
T 3he8_A 76 NKVPGIRAAV 85 (149)
T ss_dssp HTSTTCCEEE
T ss_pred HCCCCEEEEE
T ss_conf 2489838870
No 24
>1c01_A Antimicrobial peptide 1; greek KEY, beta-barrel, antimicrobial protein; NMR {Macadamia integrifolia} SCOP: b.11.1.5
Probab=31.54 E-value=15 Score=16.76 Aligned_cols=15 Identities=33% Similarity=0.578 Sum_probs=11.4
Q ss_pred CCCCCCCCCCEEEEE
Q ss_conf 411788572313665
Q gi|254780629|r 157 PRGQLGFGYDPIFQP 171 (224)
Q Consensus 157 prG~~GFGyDpIF~p 171 (224)
.+-=+||||-+|||-
T Consensus 61 ~qaC~~FgWkSifIq 75 (76)
T 1c01_A 61 ARACNPFGWKSIFIQ 75 (76)
T ss_dssp CCBCSCCCCSEEEEC
T ss_pred CCCCCCCCCEEEEEE
T ss_conf 300367662488975
No 25
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=30.79 E-value=27 Score=15.19 Aligned_cols=84 Identities=12% Similarity=0.104 Sum_probs=57.9
Q ss_pred CCEEEEECCCCC------HHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCC-CCCEEEEECHHHH
Q ss_conf 777999849922------799999973007919972444788566667655456778765331134-5630785201243
Q gi|254780629|r 6 ENNIVIASHNVD------KIHEMDSLIMPLGIMTTSALELNLIIPEETGNSFEENAMIKSLTAAKN-AGMPALSDDSGLV 78 (224)
Q Consensus 6 ~~kii~aT~N~~------K~~E~~~iL~~~~i~~~~~~~~~~~~peE~g~tf~eNA~~KA~~~~~~-~~~pvlaDDSGL~ 78 (224)
.+||-+++.|.+ =+++++.+|.+.|.+++.. ....++....+|-+.|..=|+..... ...-++..-||.=
T Consensus 3 ~MKIAl~~d~s~a~kn~~I~~~Lk~~l~~~G~eV~D~---G~~~e~~~~~dYpd~a~~va~~v~~g~~d~gIl~CGTG~G 79 (214)
T 3ono_A 3 AMKIALMMENSQAAKNAMVAGELNSVAGGLGHDVFNV---GMTDENDHHLTYIHLGIMASILLNSKAVDFVVTGCGTGQG 79 (214)
T ss_dssp CCEEEECCCGGGGGGHHHHHHHHHHHHHHTTCEEEEC---SCSSTTSSCCCHHHHHHHHHHHHHTTSCSEEEEEESSSHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEC---CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHH
T ss_conf 8279985576650055899999999999679989967---8999988879877999999999967998769996784698
Q ss_pred HH-HHHCCCCHHHHH
Q ss_conf 43-420144514344
Q gi|254780629|r 79 ID-VLDGKPGIHSAR 92 (224)
Q Consensus 79 vd-aL~G~PGvySaR 92 (224)
+- +.|-+|||+.+.
T Consensus 80 ~siaANK~~GIraal 94 (214)
T 3ono_A 80 ALMSCNLHPGVVCGY 94 (214)
T ss_dssp HHHHHHTSTTCCEEE
T ss_pred HHHHHHCCCCEEEEE
T ss_conf 999971789859998
No 26
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=30.27 E-value=28 Score=15.14 Aligned_cols=77 Identities=12% Similarity=0.125 Sum_probs=54.5
Q ss_pred EEECCCCCHHHHHHHHHHHCCCEEEEHHH------CCC----CCCCC------------------CCCCHHHHHHHHHHH
Q ss_conf 99849922799999973007919972444------788----56666------------------765545677876533
Q gi|254780629|r 10 VIASHNVDKIHEMDSLIMPLGIMTTSALE------LNL----IIPEE------------------TGNSFEENAMIKSLT 61 (224)
Q Consensus 10 i~aT~N~~K~~E~~~iL~~~~i~~~~~~~------~~~----~~peE------------------~g~tf~eNA~~KA~~ 61 (224)
|+++.=.||-+=.-.+-..++.++++... ++| +-++| +...|..-|......
T Consensus 7 i~G~TgsGKS~Lai~LA~~~~geIIsaDSmQvYkgldI~TaK~t~~E~~~vpHhli~~~~~~~~~~v~~F~~~a~~~i~~ 86 (409)
T 3eph_A 7 IAGTTGVGKSQLSIQLAQKFNGEVINSDSMQVYKDIPIITNKHPLQEREGIPHHVMNHVDWSEEYYSHRFETECMNAIED 86 (409)
T ss_dssp EEECSSSSHHHHHHHHHHHHTEEEEECCTTTTBSSCTTTTTCCCGGGTTTCCEESCSCBCTTSCCCHHHHHHHHHHHHHH
T ss_pred EECCCHHHHHHHHHHHHHHCCCEEECCCHHHHHCCCCEEECCCCHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 98976044999999999987998981018876199975778999999918996035244899873799999999999999
Q ss_pred HCCCCCCEEEEECHHHHHHHH-HCCC
Q ss_conf 113456307852012434342-0144
Q gi|254780629|r 62 AAKNAGMPALSDDSGLVIDVL-DGKP 86 (224)
Q Consensus 62 ~~~~~~~pvlaDDSGL~vdaL-~G~P 86 (224)
+...-+.|+++=-||++|.+| +|.+
T Consensus 87 i~~rgk~PIiVGGT~~Yi~aLl~~~~ 112 (409)
T 3eph_A 87 IHRRGKIPIVVGGTHYYLQTLFNKRV 112 (409)
T ss_dssp HHTTTCEEEEECSCGGGGGGGGTCSC
T ss_pred HHHCCCCEEEECCCCHHHHHHHHHCC
T ss_conf 98628965998882179999974304
No 27
>2wsc_2 LHCA2, type II chlorophyll A/B binding protein from photosystem I; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Pisum sativum} PDB: 2wse_2* 2wsf_2* 2o01_2*
Probab=28.93 E-value=14 Score=16.86 Aligned_cols=32 Identities=25% Similarity=0.236 Sum_probs=20.9
Q ss_pred CCCCCCCCCCCEEEEECCCCCCHHHC-CHHHHC
Q ss_conf 64117885723136656998477768-987850
Q gi|254780629|r 156 PPRGQLGFGYDPIFQPNGYDRTFGEM-TEEEKN 187 (224)
Q Consensus 156 ~prG~~GFGyDpIF~p~g~~kT~aEm-~~~eKn 187 (224)
.+...+|+||||+.+-......+.+| ..|.||
T Consensus 192 ~~~~Pgg~~fDPlg~~~~d~~~~~~lk~kELkN 224 (269)
T 2wsc_2 192 DVGYPGGLWFDPLGWGSASPQKLKELRTKEIKN 224 (269)
T ss_dssp SCSCTTCSSCCCSSSSSSCCCSCTTSTTTTHHH
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 778899767775336789999999999999998
No 28
>1o1x_A Ribose-5-phosphate isomerase RPIB; TM1080, structural genomics, JCSG, PSI, protein structure initiative; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=27.62 E-value=31 Score=14.87 Aligned_cols=82 Identities=20% Similarity=0.223 Sum_probs=58.0
Q ss_pred CCEEEEECCCCC-HHH-HHHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCC-CCCEEEEECHHHHH-HH
Q ss_conf 777999849922-799-999973007919972444788566667655456778765331134-56307852012434-34
Q gi|254780629|r 6 ENNIVIASHNVD-KIH-EMDSLIMPLGIMTTSALELNLIIPEETGNSFEENAMIKSLTAAKN-AGMPALSDDSGLVI-DV 81 (224)
Q Consensus 6 ~~kii~aT~N~~-K~~-E~~~iL~~~~i~~~~~~~~~~~~peE~g~tf~eNA~~KA~~~~~~-~~~pvlaDDSGL~v-da 81 (224)
.+||.|++--.| .++ +++.+|...+++++.. ... . ++..+|-+.|..=|+.+.+. ...-++..-||.=+ =+
T Consensus 12 ~MKI~igsDHaG~~lK~~l~~~L~~~g~ev~D~---G~~-~-~~~~DYpd~a~~va~~V~~~~~~~GIliCGtG~G~sIa 86 (155)
T 1o1x_A 12 HVKIAIASDHAAFELKEKVKNYLLGKGIEVEDH---GTY-S-EESVDYPDYAKKVVQSILSNEADFGILLCGTGLGMSIA 86 (155)
T ss_dssp CCEEEEEECSTTHHHHHHHHHHHHHTTCEEEEC---CCC-S-SSCCCHHHHHHHHHHHHHTTSCSEEEEEESSSHHHHHH
T ss_pred CEEEEEEECCHHHHHHHHHHHHHHHCCCEEEEC---CCC-C-CCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHH
T ss_conf 639999748717999999999999879989978---999-8-77778317899999997347763479964898799999
Q ss_pred HHCCCCHHHHH
Q ss_conf 20144514344
Q gi|254780629|r 82 LDGKPGIHSAR 92 (224)
Q Consensus 82 L~G~PGvySaR 92 (224)
.|-+|||+.|.
T Consensus 87 ANK~~GIRAal 97 (155)
T 1o1x_A 87 ANRYRGIRAAL 97 (155)
T ss_dssp HTTSTTCCEEE
T ss_pred HHCCCCEEEEE
T ss_conf 73689859999
No 29
>3c5y_A Ribose/galactose isomerase; YP_001165900.1, putative ribose 5-phosphate isomerase, structural genomics; HET: MSE; 1.81A {Novosphingobium aromaticivorans DSM12444}
Probab=26.51 E-value=33 Score=14.75 Aligned_cols=83 Identities=13% Similarity=0.219 Sum_probs=59.1
Q ss_pred CCEEEEECCCCCH------HHHHHHHHHHCCCEEEEHHHCCCCCCC-CCCCCHHHHHHHHHHHHCC-CCCCEEEEECHHH
Q ss_conf 7779998499227------999999730079199724447885666-6765545677876533113-4563078520124
Q gi|254780629|r 6 ENNIVIASHNVDK------IHEMDSLIMPLGIMTTSALELNLIIPE-ETGNSFEENAMIKSLTAAK-NAGMPALSDDSGL 77 (224)
Q Consensus 6 ~~kii~aT~N~~K------~~E~~~iL~~~~i~~~~~~~~~~~~pe-E~g~tf~eNA~~KA~~~~~-~~~~pvlaDDSGL 77 (224)
.+||-+++-|.+- .++++.++.+.|.+++.. ....++ ....+|-+.|..=|+.+.. ....-++..-||.
T Consensus 19 ~MKIAi~~dhs~a~kn~~I~~~Lk~~l~~~GheV~D~---G~~s~ed~~svDYpd~a~~vA~~V~~g~~d~GIliCGTG~ 95 (231)
T 3c5y_A 19 GMKIALIIENSQAAKNAVVHEALTTVAEPLGHKVFNY---GMYTAEDKASLTYVMNGLLAGILLNSGAADFVVTGCGTGM 95 (231)
T ss_dssp CCEEEECCCGGGGGGHHHHHHHHHHHHGGGTCEEEEC---CCCSTTCSSCCCHHHHHHHHHHHHHHTSCSEEEEEESSSH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEC---CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHH
T ss_conf 8679996465104464799999999998479989956---8899876776886899999999996799776899778549
Q ss_pred HH-HHHHCCCCHHHH
Q ss_conf 34-342014451434
Q gi|254780629|r 78 VI-DVLDGKPGIHSA 91 (224)
Q Consensus 78 ~v-daL~G~PGvySa 91 (224)
=+ =+.|-+|||..+
T Consensus 96 G~siaANK~~GIRaa 110 (231)
T 3c5y_A 96 GSMLAANAMPGVFCG 110 (231)
T ss_dssp HHHHHHHTSTTCCEE
T ss_pred HHHHHHHCCCCEEEE
T ss_conf 999997179985999
No 30
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, cytoplasm, one-carbon metabolism, pyridoxal phosphate; 1.60A {Burkholderia pseudomallei}
Probab=23.81 E-value=11 Score=17.59 Aligned_cols=43 Identities=19% Similarity=0.183 Sum_probs=25.4
Q ss_pred EEEECCCCCCCEEEEEEEEEEEEEECCCCC-CCCCCCEEEEECC
Q ss_conf 862013234210456433324998264117-8857231366569
Q gi|254780629|r 131 SVLSLAWPDGHVENFSGKVSGIIVWPPRGQ-LGFGYDPIFQPNG 173 (224)
Q Consensus 131 ~~~~~~~~~~~~~~f~G~~~G~I~~~prG~-~GFGyDpIF~p~g 173 (224)
...++..|+..+....-..-|.++....++ .|.+|+.+++|-.
T Consensus 110 v~~all~pGD~il~l~l~~GGHlshg~~~~~~g~~~~~~~y~~~ 153 (425)
T 3ecd_A 110 VMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVS 153 (425)
T ss_dssp HHHHHCCTTCEEEEECC------------------CEEEEECCC
T ss_pred HHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCC
T ss_conf 99984589998998563458875545555653037886874523
No 31
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=20.29 E-value=43 Score=14.02 Aligned_cols=33 Identities=12% Similarity=0.181 Sum_probs=27.7
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEH
Q ss_conf 567779998499227999999730079199724
Q gi|254780629|r 4 LIENNIVIASHNVDKIHEMDSLIMPLGIMTTSA 36 (224)
Q Consensus 4 ~~~~kii~aT~N~~K~~E~~~iL~~~~i~~~~~ 36 (224)
.|+++|+++-.|+.=..-++.+|...|+++...
T Consensus 3 ~M~kkILvVdDd~~~~~~l~~~L~~~g~~v~~a 35 (127)
T 2gkg_A 3 HMSKKILIVESDTALSATLRSALEGRGFTVDET 35 (127)
T ss_dssp ---CEEEEECSCHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEE
T ss_conf 558859999899999999999999879999998
Done!