HHSEARCH alignment of GI: 254780629 and SCOP domain: d1k7ka_

Alignment
>d1k7ka_ c.51.4.1 (A:) Hypothetical protein YggV {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=0  Score=425.84  Aligned_cols=195  Identities=37%  Similarity=0.559  Sum_probs=175.6

Q ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHC
Q ss_conf             67779998499227999999730079199724447885666676554567787653311345630785201243434201
Q gi|254780629|r    5 IENNIVIASHNVDKIHEMDSLIMPLGIMTTSALELNLIIPEETGNSFEENAMIKSLTAAKNAGMPALSDDSGLVIDVLDG   84 (224)
Q Consensus         5 ~~~kii~aT~N~~K~~E~~~iL~~~~i~~~~~~~~~~~~peE~g~tf~eNA~~KA~~~~~~~~~pvlaDDSGL~vdaL~G   84 (224)
                      .|++|+|||+|+||++|++.+|.+++++++++.++++++|+|+|.||.|||++||+++++.++.||||||||||||||+|
T Consensus        12 ~M~kI~~aT~N~~K~~E~~~iL~~~~i~v~~~~~~~i~e~eE~g~t~~enA~~KA~~~~~~~~~pvl~DDsGL~idaL~g   91 (209)
T d1k7ka_          12 HMQKVVLATGNVGKVRELASLLSDFGLDIVAQTDLGVDSAEETGLTFIENAILKARHAAKVTALPAIADDSGLAVDVLGG   91 (209)
T ss_dssp             CCEEEEESCCCHHHHHHHHHHHGGGTEEEEETTTTTCCCCCCCCSSHHHHHHHHHHHHHHHHSSCEEEEEEEEEEGGGTT
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEHHHCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCEECCCEEEHHHHCC
T ss_conf             78789999398889999999751259779854660998633304067777778887765314687433141676433438


Q ss_pred             CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCC--CCCCEEEEEEEEEEEEEECCCCCCC
Q ss_conf             44514344304578868889999998877752135677765068998620132--3421045643332499826411788
Q gi|254780629|r   85 KPGIHSARWAESNTGERDFDMAMQKIENALRSKFAHDPAFRSAHFISVLSLAW--PDGHVENFSGKVSGIIVWPPRGQLG  162 (224)
Q Consensus        85 ~PGvySaR~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~R~A~f~~~~~~~~--~~~~~~~f~G~~~G~I~~~prG~~G  162 (224)
                      +|||||+||++....+...   +..++..+..   .....|+|+|+|++++++  +++.+.+|+|.|+|.|+.+|||++|
T Consensus        92 ~PGvys~r~~~~~~~~~~~---~~~~l~~~~~---~~~~~r~a~f~~~~~~~~~~~~~~~~~f~G~~~G~I~~~~~G~~G  165 (209)
T d1k7ka_          92 APGIYSARYSGEDATDQKN---LQKLLETMKD---VPDDQRQARFHCVLVYLRHAEDPTPLVCHGSWPGVITREPAGTGG  165 (209)
T ss_dssp             CBGGGSTTTTCTTCCHHHH---HHHHHHHTTT---SCGGGCEEEEEEEEEEESSTTCSSCEEEEEEEEEEECSSCCCCSS
T ss_pred             CCCCCCHHHHCCCCCHHHH---HHHHHHHHCC---CCHHHHHHHCEEEEEEECCCCCCCEEEEEEEECCEEEECCCCCCC
T ss_conf             7677544354136878899---9987766515---765566342178999843678982588998866588526788888


Q ss_pred             CCCCEEEEECCCCCCHHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             5723136656998477768987850121232223323343525899999999999987
Q gi|254780629|r  163 FGYDPIFQPNGYDRTFGEMTEEEKNGGIDSATLFSILSTDLLSHRARAFKCFVDNCLR  220 (224)
Q Consensus       163 FGyDpIF~p~g~~kT~aEm~~~eKn~~~~~~~~~~~~~~~~iSHR~~Al~kl~~~l~~  220 (224)
                      |||||||+|+|+++|||||+.+|||+               ||||++|+++|+++|+.
T Consensus       166 FGyDpIFip~g~~kTfaEm~~~eKn~---------------iSHR~~A~~kl~~~Lk~  208 (209)
T d1k7ka_         166 FGYDPIFFVPSEGKTAAELTREEKSA---------------ISHRGQALKLLLDALRN  208 (209)
T ss_dssp             STTGGGEEEGGGTEEGGGSCHHHHHH---------------HSHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCCCCHHHCCHHHHHH---------------CCHHHHHHHHHHHHHHC
T ss_conf             99773588789996664499999665---------------29999999999999657


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Anticodon-binding domain-like
superfamily: ITPase-like
family: ITPase (Ham1)
domain: Hypothetical protein YggV
species: Escherichia coli [TaxId: 562]