HHsearch alignment for GI: 254780630 and conserved domain: KOG1068

Probab=100.00  E-value=3.2e-42  Score=256.19  Aligned_cols=222  Identities=26%  Similarity=0.314  Sum_probs=197.5

Q ss_pred             CCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCEEEEEEEECCCCCCCC-CCCCCCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf             967899801178799997663268828999968948999999333245310-1554342110010055565322233344
Q gi|254780630|r    1 MRLSGRQENQMREISLTRRVSKYAEGSCLVKFGDTHLLTTATLEEKVPMWI-RNTKHGWITAEYGMLPRSTGNRVKREAV   79 (242)
Q Consensus         1 iR~DGR~~~e~R~i~i~~g~~~~a~GSa~v~~G~T~Vl~~V~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~   79 (242)
T Consensus        13 ~r~dgRr~~elR~i~~~~g~~~~a~GSay~E~GnTKVl~aV~GPre~~~~~~~~~~~a~lnc~~~~a~Fst~~r~~~~~~   92 (245)
T KOG1068          13 LRTDGRRPNELRRIYARIGVLTQADGSAYMEQGNTKVLCAVYGPREIRGKSARRPDKAVLNCEVSSAQFSTGDRKKRPKG   92 (245)
T ss_pred             CCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHCCCCCC
T ss_conf             44577885674101211174236885010024880799998488442231002666524777775420111210157876


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCHHHHCCCCCCCHHHCCCCCCCCCCCCEECCCCC
Q ss_conf             44777310234444322421000220048802223442035557631010001222101100100000146310112437
Q gi|254780630|r   80 SGRQGGRSQEIQRMIGRALRSVVDLSALGSRQIIIDCDVIQADGGTRTAAITGAWVALHDCLQHMEDCSNKFQLSQVLKG  159 (242)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~i~v~v~~~dg~~~~a~~~a~~~Al~~a~i~~~~~~~~~~~~~~~~~  159 (242)
T Consensus        93 ~----rr~~e~s~~L~~afe~~I~~~lyPrsqIDI~v~VleddG~~laa~inaatlAL~daGI~m~D~------------  156 (245)
T KOG1068          93 D----RREKELSLMLQQAFEPVILLELYPRSQIDIYVQVLEDDGSNLAAAINAATLALADAGIPMYDL------------  156 (245)
T ss_pred             C----HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHH------------
T ss_conf             2----788999999999988888752376556139999997799529988878899999819974435------------


Q ss_pred             CCCEEECCCCCCCCEECCCCCCCCCCCEEEEEE-ECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             831020045455410033431012343036888-7599868999921863686899999999999999999999999997
Q gi|254780630|r  160 HVAAISCGMLCGYPIVDLDYGEDSTIDVDANFV-MTDSGHIVEVQGSAERATFSQDHFFAMLNLAKDRIADLIKLQKDVI  238 (242)
Q Consensus       160 ~~~~~~~~~~~~~~~~d~~~~ee~~~~~~l~v~-~~~~~~i~~i~~~g~~~~~~~~~l~~~l~~a~~~~~~i~~~i~~~L  238 (242)
T Consensus       157 -i~~~t~~l~~~~~l~Dl~~~eesa~~~~ltVa~l~~~~~i~~l~~~~---~~~~d~l~~vl~~a~~~c~~v~~~l~~~l  232 (245)
T KOG1068         157 -ITACTAGLADGTPLLDLTSLEESARAPGLTVAALPNREEIALLQLDE---RLHCDHLETVLELAIAGCKRVYERLRLVL  232 (245)
T ss_pred             -HHHCEEEECCCCCCCCCCCCHHHCCCCCEEEEEECCCCEEEEEEECC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             -55110132078643365410545247862899822765278898518---87778899999999999999999999999


Q ss_pred             HHCC
Q ss_conf             7209
Q gi|254780630|r  239 SNEV  242 (242)
Q Consensus       239 ~~~~  242 (242)
T Consensus       233 ~~~l  236 (245)
T KOG1068         233 REHL  236 (245)
T ss_pred             HHHH
T ss_conf             9999