HHsearch alignment for GI: 254780630 and conserved domain: TIGR02696

>TIGR02696 pppGpp_PNP guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase; InterPro: IPR014069 The of the characterization of two proteins from Streptomyces coelicolor ahs been presented . The protein in this family was shown to have poly(A) polymerase activity and may be responsible for polyadenylating RNA in this species. It has also been shown that a nearly identical plasmid-encoded protein from Streptomyces antibioticus is a bifunctional enzyme that acts also as a guanosine pentaphosphate synthetase ..
Probab=98.91  E-value=3.1e-08  Score=65.28  Aligned_cols=212  Identities=18%  Similarity=0.154  Sum_probs=158.1

Q ss_pred             CEEEEEEEEC-CCCCCCCEEEEEEC-CCEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCC-CCCCCCCCCCCCC
Q ss_conf             1787999976-63268828999968-9489999993332453101554342110010055565322-2333444477731
Q gi|254780630|r   10 QMREISLTRR-VSKYAEGSCLVKFG-DTHLLTTATLEEKVPMWIRNTKHGWITAEYGMLPRSTGNR-VKREAVSGRQGGR   86 (242)
Q Consensus        10 e~R~i~i~~g-~~~~a~GSa~v~~G-~T~Vl~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r-~~~~~~~~~~~~~   86 (242)
T Consensus        15 G~~~~rfe~G~la~qa~G~~~~yld~~tm~l~~t~~~~~P---~~~~dffPltvdveer~yaaG~iPGsffrreGrPs~~   91 (725)
T TIGR02696        15 GTRTIRFETGRLARQAQGSVVAYLDDETMLLSATTASKQP---KDQLDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTE   91 (725)
T ss_pred             CCEEEEEECCHHHHHCCCCEEEEECCCEEEEEECHHCCCC---HHHCCCCCEEEEHHHHHHHCCCCCCCCCCCCCCCCHH
T ss_conf             6516664001132322773788872761466420001374---0224512205531000010267875110147897412


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCHHHHCCCCCCCHHHCCCCCCCCCCCCEECCCCCCCCEEEC
Q ss_conf             02344443224210002200488022234420355576310100012221011001000001463101124378310200
Q gi|254780630|r   87 SQEIQRMIGRALRSVVDLSALGSRQIIIDCDVIQADGGTRTAAITGAWVALHDCLQHMEDCSNKFQLSQVLKGHVAAISC  166 (242)
Q Consensus        87 ~~~~~~~~~~~l~~~~~~~~~~~~~i~i~v~v~~~dg~~~~a~~~a~~~Al~~a~i~~~~~~~~~~~~~~~~~~~~~~~~  166 (242)
T Consensus        92 ail~CrlidrPlrP~f~~Glrne~q~v~tvl~~~P~~~y~~~ainaas~~t~-------------~~GlP~sGP~~Gvr~  158 (725)
T TIGR02696        92 AILACRLIDRPLRPSFVKGLRNEVQVVVTVLSLNPDELYDVVAINAASASTQ-------------LAGLPFSGPIGGVRL  158 (725)
T ss_pred             HEEEEEECCCCCCHHHHHHHHHHEEEEEEEEECCHHHHHHHHHHHHHHHHHH-------------HCCCCCCCCCCCEEE
T ss_conf             3123100046787125520012000012312017256766666543434433-------------126754466442488


Q ss_pred             CCCC-CCCEECCCCCCCCCCCEEEEEEE---CC----CCC--EEEEEECCCCCCC----------CHHHHHHHHHHHHHH
Q ss_conf             4545-54100334310123430368887---59----986--8999921863686----------899999999999999
Q gi|254780630|r  167 GMLC-GYPIVDLDYGEDSTIDVDANFVM---TD----SGH--IVEVQGSAERATF----------SQDHFFAMLNLAKDR  226 (242)
Q Consensus       167 ~~~~-~~~~~d~~~~ee~~~~~~l~v~~---~~----~~~--i~~i~~~g~~~~~----------~~~~l~~~l~~a~~~  226 (242)
T Consensus       159 ali~~~qWvafP~~~~~~~a~f~~~v~Grv~~~~~~~~~dvaimmvea~~t~~~~~~~~~G~~~P~e~~v~~Gl~aak~f  238 (725)
T TIGR02696       159 ALIEDGQWVAFPTVEQLEEAVFDLVVAGRVLENEDGTEGDVAIMMVEAEATEKTLELVEGGAKAPTEEVVAEGLEAAKPF  238 (725)
T ss_pred             EEEECCCEEECCCHHHHHCCEEEEEEEEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf             89717825863762322013033356511231245665645899962334178999986110373278998767767899


Q ss_pred             HHHHHHHHHHH
Q ss_conf             99999999999
Q gi|254780630|r  227 IADLIKLQKDV  237 (242)
Q Consensus       227 ~~~i~~~i~~~  237 (242)
T Consensus       239 i~~l~~~q~~l  249 (725)
T TIGR02696       239 IKVLCRAQADL  249 (725)
T ss_pred             HHHHHHHHHHH
T ss_conf             99999999999