HHsearch results for GI: 254780630 and protein with PDBid: 1r6l_A
>1r6l_A Ribonuclease PH; beta-alpha-beta-alpha fold, hexamer, phosphate bound, transferase; HET: NHE; 1.90A {Pseudomonas aeruginosa} SCOP: d.14.1.4 d.101.1.1 PDB: 1r6m_A
Probab=100.00 E-value=0 Score=287.00 Aligned_cols=237 Identities=52% Similarity=0.815 Sum_probs=220.6
Q ss_pred CCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 67899801178799997663268828999968948999999333245310155434211001005556532223334444
Q gi|254780630|r 2 RLSGRQENQMREISLTRRVSKYAEGSCLVKFGDTHLLTTATLEEKVPMWIRNTKHGWITAEYGMLPRSTGNRVKREAVSG 81 (242)
Q Consensus 2 R~DGR~~~e~R~i~i~~g~~~~a~GSa~v~~G~T~Vl~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 81 (242)
|+|||+++|+|||++++|++++|||||+|++|+|+|+|+|++|++.|...+.++++...+.+.+.++....+.......+
T Consensus 3 R~DGR~~~e~R~i~i~tg~l~~AdGSa~v~~G~T~Vl~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (239)
T 1r6l_A 3 RPSGRAADQLRPIRITRHYTKHAEGSVLVEFGDTKVICTVSAESGVPRFLKGQGQGWLTAEYGMLPRSTGERNQREASRG 82 (239)
T ss_dssp CTTCCCTTCCCCEEEESSCSSSSSEEEEEEETTEEEEEEEEEEESCSSCCC---CCEEEEEEEECTTSSSSCCCCHHHHT
T ss_pred CCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC
T ss_conf 89899998844769996988999879999989939999998066367653588851689988503435565434557767
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCHHHHCCCCCCCHHHCCCCCCCCCCCCEECCCCCCC
Q ss_conf 77731023444432242100022004880222344203555763101000122210110010000014631011243783
Q gi|254780630|r 82 RQGGRSQEIQRMIGRALRSVVDLSALGSRQIIIDCDVIQADGGTRTAAITGAWVALHDCLQHMEDCSNKFQLSQVLKGHV 161 (242)
Q Consensus 82 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~i~v~v~~~dg~~~~a~~~a~~~Al~~a~i~~~~~~~~~~~~~~~~~~~ 161 (242)
..........+.+.+++++.+++..++.+.+.+++++++.||+.++++.++.++|+.++++++.+. +.....|+.+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~vl~~dg~~~~~~~~~~~~al~~~~~~~~~~--~~~~~~~~~~~~ 160 (239)
T 1r6l_A 83 KQGGRTLEIQRLIGRSLRAALDLSKLGENTLYIDCDVIQADGGTRTASITGATVALIDALAVLKKR--GALKGNPLKQMV 160 (239)
T ss_dssp SCCHHHHHHHHHHHHHHHHTBCGGGTCSEEEEEEEEEEECSSCHHHHHHHHHHHHHHHHHHHHHHT--TCCSSCCBCCCE
T ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCC
T ss_conf 757889999999864442248830039748999999982689854210237889999877777654--784326522553
Q ss_pred CEEECCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 1020045455410033431012343036888759986899992186368689999999999999999999999999772
Q gi|254780630|r 162 AAISCGMLCGYPIVDLDYGEDSTIDVDANFVMTDSGHIVEVQGSAERATFSQDHFFAMLNLAKDRIADLIKLQKDVISN 240 (242)
Q Consensus 162 ~~~~~~~~~~~~~~d~~~~ee~~~~~~l~v~~~~~~~i~~i~~~g~~~~~~~~~l~~~l~~a~~~~~~i~~~i~~~L~~ 240 (242)
.+++++..++.++.||+.+|+..+++++++++++++++|.+++.|++++|++++|.+|+++|+++|++|+++++++|++
T Consensus 161 ~~~~~~~~~~~~v~d~~~~Ee~~~~~~l~v~~~~~~~i~~i~~~~~~~~~~~~~l~~~i~~A~~~~~~l~~~~~~al~e 239 (239)
T 1r6l_A 161 AAVSVGIYQGVPVLDLDYLEDSAAETDLNVVMTDAGGFIEVQGTAEGAPFRPAELNAMLELAQQGMQELFELQRAALAE 239 (239)
T ss_dssp EEEEEEEETTEEEESCCHHHHHHCSEEEEEEEETTSCEEEEEEEESSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCEECCCCCEEEECCCHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 4313211799884058887873157569999928998899996157798599999999999999999999999998677