HHsearch results for GI: 254780630 and protein with PDBid: 2nn6_C

Probab=100.00  E-value=0  Score=276.47  Aligned_cols=234  Identities=17%  Similarity=0.184  Sum_probs=197.0

Q ss_pred             CCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf             96789980117879999766326882899996894899999933324531015543421100100555653222333444
Q gi|254780630|r    1 MRLSGRQENQMREISLTRRVSKYAEGSCLVKFGDTHLLTTATLEEKVPMWIRNTKHGWITAEYGMLPRSTGNRVKREAVS   80 (242)
Q Consensus         1 iR~DGR~~~e~R~i~i~~g~~~~a~GSa~v~~G~T~Vl~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~   80 (242)
                      +|+|||+++|+|++++++|++++|+|||+|++|+|+|+|+|++|...+. ...+..+.+.+.+.+.+++...+..+... 
T Consensus        24 iR~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~V~~~V~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-  101 (278)
T 2nn6_C           24 CRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPS-TDAPDKGYVVPNVDLPPLCSSRFRSGPPG-  101 (278)
T ss_dssp             CCTTSCCSCCCCSCCEEETCCSSSSEEEEEEETTEEEEEEEEEEECCCC-SSSTTCCCCEEEEECCSSSCTTSCSSSCC-
T ss_pred             CCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCEEEEEEEECCCCCH-HHCCCCCCCEEEEEECCCCCCCCCCCCCC-
T ss_conf             8699969998447599979878887179999799479888884135864-55255564136888535456675678898-


Q ss_pred             CCCCCCHHHHHHHHHHH--------HHHHCCCCCCCCEEEEEEEEECCCCCCCCHHHHCCCCCCCHHHCCCCCCCCCC--
Q ss_conf             47773102344443224--------21000220048802223442035557631010001222101100100000146--
Q gi|254780630|r   81 GRQGGRSQEIQRMIGRA--------LRSVVDLSALGSRQIIIDCDVIQADGGTRTAAITGAWVALHDCLQHMEDCSNK--  150 (242)
Q Consensus        81 ~~~~~~~~~~~~~~~~~--------l~~~~~~~~~~~~~i~i~v~v~~~dg~~~~a~~~a~~~Al~~a~i~~~~~~~~--  150 (242)
                          ......+..+.+.        +...+....++.|.+.++++++++||++++++++|+++||.++++|+......  
T Consensus       102 ----~~~~~~~~~l~~~~~~~~~i~~~~l~i~~~~~~~~I~i~v~Vl~~DG~~~~a~~~A~~~AL~d~~iP~~~~~~~~~  177 (278)
T 2nn6_C          102 ----EEAQVASQFIADVIENSQIIQKEDLCISPGKLVWVLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETA  177 (278)
T ss_dssp             ----HHHHHHHHHHHHHHHHHCCSCHHHHCSSBTTBCEEEEEEEEESSCCSCTTHHHHHHHHHHHHTCCCCCCCBCSSSB
T ss_pred             ----CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCE
T ss_conf             ----4220111799998875445677763131268508999999998479981228999999999964998155416722


Q ss_pred             -------CCEECCCCCCCCEEECCCCCCC-CEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHH
Q ss_conf             -------3101124378310200454554-10033431012343036888759986899992186368689999999999
Q gi|254780630|r  151 -------FQLSQVLKGHVAAISCGMLCGY-PIVDLDYGEDSTIDVDANFVMTDSGHIVEVQGSAERATFSQDHFFAMLNL  222 (242)
Q Consensus       151 -------~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~~ee~~~~~~l~v~~~~~~~i~~i~~~g~~~~~~~~~l~~~l~~  222 (242)
                             ...++++++.+++++++..++. ++.||+.+||..+++.++++++++|++|.+++.| +.+++++++.+|+++
T Consensus       178 ~~~~~~~~~~~l~~~~~p~~~t~~~~~~~~~l~Dpt~~Ee~~~~~~~~v~~~~~~~i~~~~~~g-~~~l~~~~l~~~i~~  256 (278)
T 2nn6_C          178 LAEVNLKKKSYLNIRTHPVATSFAVFDDTLLIVDPTGEEEHLATGTLTIVMDEEGKLCCLHKPG-GSGLTGAKLQDCMSR  256 (278)
T ss_dssp             CCCTTSCCCSCSCCSCCCEEEEEEECTTTCCEESCCTTTTTSCSEEEEEEECTTCCEEEEEESC-CSCCCHHHHHHHHHH
T ss_pred             EEECCCCCCCCCCCCCCCEEEEEEEECCCEEEECCCHHHHHHCCCEEEEEECCCCCEEEEECCC-CCCCCHHHHHHHHHH
T ss_conf             5532444332231136724899986169628727998999525876999995999899999278-988799999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHC
Q ss_conf             9999999999999997720
Q gi|254780630|r  223 AKDRIADLIKLQKDVISNE  241 (242)
Q Consensus       223 a~~~~~~i~~~i~~~L~~~  241 (242)
                      |.+++++++++++++|++.
T Consensus       257 A~~~~~~l~~~l~~~l~~~  275 (278)
T 2nn6_C          257 AVTRHKEVKKLMDEVIKSM  275 (278)
T ss_dssp             HHHHHHHHHHHHHTTTTTT
T ss_pred             HHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999999999750