HHsearch results for GI: 254780630 and protein with PDBid: 2wnr_A
>2wnr_A Probable exosome complex exonuclease 2; phosphate binding, 3'-5' exoribonuclease, hydrolase; 2.65A {Methanothermobacterthermautotrophicus}
Probab=100.00 E-value=5.6e-45 Score=270.22 Aligned_cols=232 Identities=19% Similarity=0.306 Sum_probs=199.0
Q ss_pred CCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 96789980117879999766326882899996894899999933324531015543421100100555653222333444
Q gi|254780630|r 1 MRLSGRQENQMREISLTRRVSKYAEGSCLVKFGDTHLLTTATLEEKVPMWIRNTKHGWITAEYGMLPRSTGNRVKREAVS 80 (242)
Q Consensus 1 iR~DGR~~~e~R~i~i~~g~~~~a~GSa~v~~G~T~Vl~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 80 (242)
+|+|||+++|+|++++++|++++|+|||+|++|+|+|+|+|++|...+. ...+..+...+.....++....+..
T Consensus 24 ~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~V~~~V~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----- 97 (271)
T 2wnr_A 24 ERIDGRSLHEFRDISIETGVISKAEGSSRVKLGNTQIIVGVKPQIGEPF-PDTPEMGVILTNSELLPMASPTFEP----- 97 (271)
T ss_dssp CCTTCCCTTCCCCEEEEESCSTTSSEEEEEEETTEEEEEEEEEEEECCC-TTCTTCCEEEEEEEECGGGCTTCCC-----
T ss_pred CCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCC-CCCCCCCEEEEEEEECCCCCCCCCC-----
T ss_conf 7799979888657499979778988489999689189999714667863-3467765378887623556667668-----
Q ss_pred CCCCCCHHHHHHHHHHHH--------HHHCCCCCCCCEEEEEEEEECCCCCCCCHHHHCCCCCCCHHHCCCCCCCCCCC-
Q ss_conf 477731023444432242--------10002200488022234420355576310100012221011001000001463-
Q gi|254780630|r 81 GRQGGRSQEIQRMIGRAL--------RSVVDLSALGSRQIIIDCDVIQADGGTRTAAITGAWVALHDCLQHMEDCSNKF- 151 (242)
Q Consensus 81 ~~~~~~~~~~~~~~~~~l--------~~~~~~~~~~~~~i~i~v~v~~~dg~~~~a~~~a~~~Al~~a~i~~~~~~~~~- 151 (242)
++..++....++.+.+.+ ++.+....+++|++.++++++++||++++++++|+++||.++++|+.+...+.
T Consensus 98 ~~~~~~~~~l~~~l~~~l~~~~~~~~~~l~~~~~~~~~~I~i~v~vl~~DG~~~~a~i~A~~~AL~da~iP~~~~~~~~~ 177 (271)
T 2wnr_A 98 GPPDERSVELSRVVDRCIRESRMIDLEKLCIIEGSKVWMLFLDLHIIDYDGNLFDAAVLATVAALLDTRIPAAEVEDGEV 177 (271)
T ss_dssp SSCCHHHHHHHHHHHHHHHHTTCBCGGGGEEETTTEEEEEEEEEEEEECSSCHHHHHHHHHHHHHHHCEEEEEEEETTEE
T ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEE
T ss_conf 89975421777999999985220235761860468857999999997689997899999999999975898422456403
Q ss_pred ------CEECCCCCCCCEEECCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH
Q ss_conf ------10112437831020045455410033431012343036888759986899992186368689999999999999
Q gi|254780630|r 152 ------QLSQVLKGHVAAISCGMLCGYPIVDLDYGEDSTIDVDANFVMTDSGHIVEVQGSAERATFSQDHFFAMLNLAKD 225 (242)
Q Consensus 152 ------~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ee~~~~~~l~v~~~~~~~i~~i~~~g~~~~~~~~~l~~~l~~a~~ 225 (242)
....++..++..+.....++.++.||+.+|+..+++.++++++++|+++.+++.| +++++++++.+|+++|.+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpt~~Ee~~~~~~~~v~~~~~g~i~~i~~~g-~~~l~~~~l~~~~~~a~~ 256 (271)
T 2wnr_A 178 VINREKMQPLPVNRKALMCTFAKIGNEIVLDPSLEEEDILTARISIGVTEEGSICAMQKGG-EGPLTRDDVLKAVSIAVE 256 (271)
T ss_dssp EEEEEEEEECCBCCCEEEEEEEEETTEEEESCCHHHHTTCSEEEEEEEETTSCEEEEEEES-SSCBCHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCEEEECCCCCEEEECCCHHHHHCCCCEEEEEEECCCCEEEEEECC-CCCCCHHHHHHHHHHHHH
T ss_conf 5304412456656763215530319987304534334126836999993899899999488-968799999999999999
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999977
Q gi|254780630|r 226 RIADLIKLQKDVIS 239 (242)
Q Consensus 226 ~~~~i~~~i~~~L~ 239 (242)
+|++|+++++++|+
T Consensus 257 ~~~~l~~~~~~~L~ 270 (271)
T 2wnr_A 257 KVPQLIEYLDKSMT 270 (271)
T ss_dssp HHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHCC
T ss_conf 99999999998739