HHsearch results for GI: 254780630 and protein with PDBid: 3m7n_G
>3m7n_G Probable exosome complex exonuclease 2; exosome, RNA, exonuclease, hydrolase, nuclease, hydrolase-RN; 2.40A {Archaeoglobus fulgidus} PDB: 2ba1_H 2ba0_I 3m85_G
Probab=100.00 E-value=0 Score=277.20 Aligned_cols=230 Identities=20% Similarity=0.247 Sum_probs=201.0
Q ss_pred CCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 96789980117879999766326882899996894899999933324531015543421100100555653222333444
Q gi|254780630|r 1 MRLSGRQENQMREISLTRRVSKYAEGSCLVKFGDTHLLTTATLEEKVPMWIRNTKHGWITAEYGMLPRSTGNRVKREAVS 80 (242)
Q Consensus 1 iR~DGR~~~e~R~i~i~~g~~~~a~GSa~v~~G~T~Vl~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 80 (242)
+|+|||+++|+||+++++|++++|||||+|++|+|+|+|+|++|...+ ....+.++.+.+.+.+.++....+.....
T Consensus 22 ~R~DGR~~~e~R~i~i~~g~l~~a~GSa~v~~G~T~V~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 98 (259)
T 3m7n_G 22 ERIDGRGFDEFRKVEIIPNVIEKAEGSALVKLGDTQVVVGVKMQPGEP-YPDTPDRGVIIVNAELVPLASPTFEPGPP-- 98 (259)
T ss_dssp CCTTCCCTTCCCCEEEEETSSTTSSEEEEEEETTEEEEEEEEEEEECC-CSSCTTSCEEEEEEECCTTSCTTCCSSSS--
T ss_pred CCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCEEEEEEECCCCCCC-CCCCCCCCEEEEEEECCCCCCCCCCCCCC--
T ss_conf 879896998842759996977898848999968837999842577786-12456654488876214555434137788--
Q ss_pred CCCCCCHHHHHHHHHH--------HHHHHCCCCCCCCEEEEEEEEECCCCCCCCHHHHCCCCCCCHHHCCCCCCCCCCCC
Q ss_conf 4777310234444322--------42100022004880222344203555763101000122210110010000014631
Q gi|254780630|r 81 GRQGGRSQEIQRMIGR--------ALRSVVDLSALGSRQIIIDCDVIQADGGTRTAAITGAWVALHDCLQHMEDCSNKFQ 152 (242)
Q Consensus 81 ~~~~~~~~~~~~~~~~--------~l~~~~~~~~~~~~~i~i~v~v~~~dg~~~~a~~~a~~~Al~~a~i~~~~~~~~~~ 152 (242)
.......++.+++ .+++.++...++.|++.++++++++||++++|+++|+++||.++++|+........
T Consensus 99 ---~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~i~v~v~vl~~DG~~~~a~~~a~~~AL~~a~i~~~~~~~~~~ 175 (259)
T 3m7n_G 99 ---DENSIELARVVDRGIRESEAVDLSKLVIEEGEKVWIVFVDIHALDDDGNLLDASALAAIAALMNTKVPAERFDLGED 175 (259)
T ss_dssp ---CHHHHHHHHHHHHHHHHTTCBCGGGGEEETTTEEEEEEEEEEEEECSSCHHHHHHHHHHHHHHTCEECTGGGTSSSC
T ss_pred ---CCHHHHHHHHHHCCCCHHHHCCHHHCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf ---83056777888631110000123433776678615899999997789984777889999999865754100002454
Q ss_pred EECCCCCCCCEEECCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 01124378310200454554100334310123430368887599868999921863686899999999999999999999
Q gi|254780630|r 153 LSQVLKGHVAAISCGMLCGYPIVDLDYGEDSTIDVDANFVMTDSGHIVEVQGSAERATFSQDHFFAMLNLAKDRIADLIK 232 (242)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~ee~~~~~~l~v~~~~~~~i~~i~~~g~~~~~~~~~l~~~l~~a~~~~~~i~~ 232 (242)
.++|+.+.++++++...++.++.||+.+|+..+++.++++++++++++.+++.| +.+++++++.+|+++|.++|+++++
T Consensus 176 ~~l~~~~~p~~~t~~~~~~~~l~Dpt~~Ee~~~~~~~~v~~~~~~~i~~~~~~g-~~~~~~~~l~~~i~~a~~~~~~l~~ 254 (259)
T 3m7n_G 176 YLLPVRDLPVSVTSLIVGNKYLVDPSREEMSVGDTTLTITTDKDDNVVAMQKSG-GYLLDEKLFDELLDVSINCARKLRE 254 (259)
T ss_dssp EECCBCCCCEEEEEEEETTEEEESCCTTGGGGCSCEEEEEECTTSCEEEEEEES-SCCBCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCEEEEEEEEEEEECCCHHHHHHCCCEEEEEECCCCCEEEEEECC-CCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 457645875313665444468607998899645956999991899899999178-9777999999999999999999999
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780630|r 233 LQKDV 237 (242)
Q Consensus 233 ~i~~~ 237 (242)
++|+.
T Consensus 255 ~~~ei 259 (259)
T 3m7n_G 255 KFKEI 259 (259)
T ss_dssp TTC--
T ss_pred HHHCC
T ss_conf 99639