PSIBLAST alignment of GI: 254780630 and protein with PDB id: 1udq
>gi|37928170|pdb|1UDQ|A Chain A, Crystal Structure Of The Trna Processing Enzyme Rnase Ph T125a Mutant From Aquifex Aeolicus Length = 255
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 114/236 (48%), Positives = 156/236 (66%), Gaps = 2/236 (0%)
Query: 1 MRLSGRQENQMREISLTRRVSKYAEGSCLVKFGDTHLLTTATLEEKVPMWIRNTKHGWIT 60
MR GR+E+Q+R +S+ R +Y EGSCL+ FG T ++ TA++ E VP W++ GWIT
Sbjct: 1 MRSDGRKEDQLRPVSIQRDFLEYPEGSCLISFGKTKVICTASVIENVPNWLKGKGQGWIT 60
Query: 61 AEYGMLPRSTGNRVKREAVSGRQGGRSQEIQRMIGRALRSVVDLSALGSRQIIIDCDVIQ 120
AEY MLPR+T R RE+V GR GGR+ EIQRMIGRA+R+ V+L+ +G R I +DCDVIQ
Sbjct: 61 AEYSMLPRATQQRTIRESVQGRIGGRTHEIQRMIGRAMRTAVELTKIGERTIWVDCDVIQ 120
Query: 121 ADGGTRTAAITGAWVALHDCLQHMEDCSNKFQLSQVLKGHVAAISCGMLCGYPIVDLDYG 180
ADGG RTAAITGA+VA+ D + + +K VAA+S G++ ++DL++
Sbjct: 121 ADGGARTAAITGAFVAVADAIIKLHKE--GIIEETPIKDFVAAVSVGIVNDRILLDLNFE 178
Query: 181 EDSTIDVDANFVMTDSGHIVEVQGSAERATFSQDHFFAMLNLAKDRIADLIKLQKD 236
EDS VD N V T SG + EV E +F++D ML+LA+ I +LI+LQK
Sbjct: 179 EDSAAQVDMNVVGTGSGRLSEVHTMGEEYSFTKDELIKMLDLAQKGINELIELQKK 234