PSIBLAST alignment of GI: 254780630 and protein with PDB id: 2nn6

gi|122920912|pdb|2NN6|F Chain F, Structure Of The Human Rna Exosome Composed Of Rrp41, Rrp45, Rrp46, Rrp43, Mtr3, Rrp42, Csl4, Rrp4, And Rrp40 Length = 272
 Score = 57.2 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 73/245 (29%), Gaps = 28/245 (11%)

Query: 6   RQENQMREISLTRRVSKYAEGSCLVKFGDTHLLTTATLEEKVPMWIRNTK---------- 55
           R   ++R +     +   A+GS  ++ G T +L   +   +     R             
Sbjct: 31  RDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGEAPA 90

Query: 56  --HGWITAEYGMLPRSTGNRVKREAVSGRQGGRSQEIQRMIGRALRSVVDLSALGSRQII 113
              G +  ++   P +   R              +E+   +  AL   V L      Q+ 
Sbjct: 91  ALRGRLLCDFRRAPFAGRRRRAPPGGC-----EERELALALQEALEPAVRLGRYPRAQLE 145

Query: 114 IDCDVIQADGGTRTAAITGAWVALHDCLQHMEDCSNKFQLSQVLKGHVAAISCGMLCGYP 173
           +   +++  G    AA+T A +AL D    M D      LS         +         
Sbjct: 146 VSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWL--------- 196

Query: 174 IVDLDYGEDSTIDVDANFVMTDSGHIVEVQGSAERATFSQDHFFAMLNLAKDRIADLIKL 233
            +D    E+          +    + V     +     ++  +   + L  +    L  +
Sbjct: 197 -LDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGLTES-WAEAVRLGLEGCQRLYPV 254

Query: 234 QKDVI 238
            +  +
Sbjct: 255 LQQSL 259