RPSBLAST alignment for GI: 254780630 and conserved domain: TIGR01966

>gnl|CDD|131021 TIGR01966, RNasePH, ribonuclease PH. This bacterial enzyme, ribonuclease PH, performs the final 3'-trimming and modification of tRNA precursors. This model is restricted absolutely to bacteria. Related families outside the model include proteins described as probable exosome complex exonucleases (rRNA processing) and polyribonucleotide nucleotidyltransferases (mRNA degradation). The most divergent member within the family is RNase PH from Deinococcus radiodurans. Length = 236

 Score =  343 bits (881), Expect = 3e-95
 Identities = 133/238 (55%), Positives = 174/238 (73%), Gaps = 2/238 (0%)

Query: 2   RLSGRQENQMREISLTRRVSKYAEGSCLVKFGDTHLLTTATLEEKVPMWIRNTKHGWITA 61
           R  GR+ +Q+R +S+TR   K+AEGS L++FG+T +L TA++EEKVP ++R +  GWITA
Sbjct: 1   RPDGRKPDQLRPVSITRDFLKHAEGSVLIEFGNTKVLCTASVEEKVPPFLRGSGEGWITA 60

Query: 62  EYGMLPRSTGNRVKREAVSGRQGGRSQEIQRMIGRALRSVVDLSALGSRQIIIDCDVIQA 121
           EYGMLPR+T  R +RE+  G+Q GR+QEIQR+IGRALR+VVDL ALG R I IDCDVIQA
Sbjct: 61  EYGMLPRATQTRNRRESAKGKQSGRTQEIQRLIGRALRAVVDLEALGERTIWIDCDVIQA 120

Query: 122 DGGTRTAAITGAWVALHDCLQHMEDCSNKFQLSQVLKGHVAAISCGMLCGYPIVDLDYGE 181
           DGGTRTA+ITGA+VAL D +  +       + S  ++  VAA+S G++ G P++DLDY E
Sbjct: 121 DGGTRTASITGAFVALADAISKLHK-RGILKESP-IRDFVAAVSVGIVDGEPVLDLDYEE 178

Query: 182 DSTIDVDANFVMTDSGHIVEVQGSAERATFSQDHFFAMLNLAKDRIADLIKLQKDVIS 239
           DS  DVD N VMT SG  VEVQG+AE   FS+D    +L+LAK  I +LI+LQK  + 
Sbjct: 179 DSAADVDMNVVMTGSGGFVEVQGTAEEGPFSRDELNKLLDLAKKGIRELIELQKQALG 236