RPSBLAST alignment for GI: 254780630 and conserved domain: COG0689
>gnl|CDD|31033 COG0689, Rph, RNase PH [Translation, ribosomal structure and biogenesis]. Length = 230
Score = 247 bits (632), Expect = 2e-66
Identities = 114/240 (47%), Positives = 156/240 (65%), Gaps = 18/240 (7%)
Query: 1 MRLSGRQENQMREISLTRRVSKYAEGSCLVKFGDTHLLTTAT-LEEKVPMWIRNTKHGWI 59
MR GR+ +++R I +TR V K+AEGS L++FG+T ++ T + E VP ++R T GW+
Sbjct: 8 MRPDGRKPDELRPIKITRGVLKHAEGSSLIEFGNTKVICTVSGPREPVPRFLRGTGKGWL 67
Query: 60 TAEYGMLPRSTGNRVKREAVSGRQGGRSQEIQRMIGRALRSVVDLSALGSRQIIIDCDVI 119
TAEYGMLPRST R KREA GR ++EI R+IGRALR+V+DL L I IDCDV+
Sbjct: 68 TAEYGMLPRSTDERKKREADRGR----TKEISRLIGRALRAVIDLELLPESTIDIDCDVL 123
Query: 120 QADGGTRTAAITGAWVALHDCLQHMEDCSNKFQLSQVLKGHVAAISCGMLCGYPIVDLDY 179
QADGGTRTA+ITGA +AL D + D VAAIS G++ G ++DLDY
Sbjct: 124 QADGGTRTASITGASLALADAGIPLRDL-------------VAAISVGIVDGVIVLDLDY 170
Query: 180 GEDSTIDVDANFVMTDSGHIVEVQGSAERATFSQDHFFAMLNLAKDRIADLIKLQKDVIS 239
EDS + D N VMT +G +VE+QG AE F++D +L+LA +L +LQ++ ++
Sbjct: 171 EEDSAAEADMNVVMTGNGGLVEIQGLAEDGPFTEDELLELLDLAIKGCNELRELQREALA 230