RPSBLAST alignment for GI: 254780630 and conserved domain: COG0689

>gnl|CDD|31033 COG0689, Rph, RNase PH [Translation, ribosomal structure and biogenesis]. Length = 230
 Score =  247 bits (632), Expect = 2e-66
 Identities = 114/240 (47%), Positives = 156/240 (65%), Gaps = 18/240 (7%)

Query: 1   MRLSGRQENQMREISLTRRVSKYAEGSCLVKFGDTHLLTTAT-LEEKVPMWIRNTKHGWI 59
           MR  GR+ +++R I +TR V K+AEGS L++FG+T ++ T +   E VP ++R T  GW+
Sbjct: 8   MRPDGRKPDELRPIKITRGVLKHAEGSSLIEFGNTKVICTVSGPREPVPRFLRGTGKGWL 67

Query: 60  TAEYGMLPRSTGNRVKREAVSGRQGGRSQEIQRMIGRALRSVVDLSALGSRQIIIDCDVI 119
           TAEYGMLPRST  R KREA  GR    ++EI R+IGRALR+V+DL  L    I IDCDV+
Sbjct: 68  TAEYGMLPRSTDERKKREADRGR----TKEISRLIGRALRAVIDLELLPESTIDIDCDVL 123

Query: 120 QADGGTRTAAITGAWVALHDCLQHMEDCSNKFQLSQVLKGHVAAISCGMLCGYPIVDLDY 179
           QADGGTRTA+ITGA +AL D    + D              VAAIS G++ G  ++DLDY
Sbjct: 124 QADGGTRTASITGASLALADAGIPLRDL-------------VAAISVGIVDGVIVLDLDY 170

Query: 180 GEDSTIDVDANFVMTDSGHIVEVQGSAERATFSQDHFFAMLNLAKDRIADLIKLQKDVIS 239
            EDS  + D N VMT +G +VE+QG AE   F++D    +L+LA     +L +LQ++ ++
Sbjct: 171 EEDSAAEADMNVVMTGNGGLVEIQGLAEDGPFTEDELLELLDLAIKGCNELRELQREALA 230