RPSBLAST alignment for GI: 254780630 and conserved domain: KOG1068
>gnl|CDD|36286 KOG1068, KOG1068, KOG1068, Exosomal 3'-5' exoribonuclease complex, subunit Rrp41 and related exoribonucleases [Translation, ribosomal structure and biogenesis]. Length = 245
Score = 84.6 bits (209), Expect = 2e-17
Identities = 58/242 (23%), Positives = 93/242 (38%), Gaps = 26/242 (10%)
Query: 2 RLSGRQENQMREISLTRRVSKYAEGSCLVKFGDTHLLTT-ATLEEKVPMWIRNTKHGWIT 60
R GR+ N++R I V A+GS ++ G+T +L E R +
Sbjct: 14 RTDGRRPNELRRIYARIGVLTQADGSAYMEQGNTKVLCAVYGPREIRGKSARRPDKAVLN 73
Query: 61 AEYGMLPRSTGNRVKREAVSGRQGGRSQEIQRMIGRALRSVVDLSALGSRQIIIDCDVIQ 120
E STG+R KR + R +E+ M+ +A V+ L QI I V++
Sbjct: 74 CEVSSAQFSTGDRKKRP----KGDRREKELSLMLQQAFEPVILLELYPRSQIDIYVQVLE 129
Query: 121 ADGGTRTAAITGAWVALHDCLQHMEDCSNKFQLSQVLKGHVAAISCGMLCGYPIVDLDYG 180
DG AAI A +AL D M D + A + G+ G P++DL
Sbjct: 130 DDGSNLAAAINAATLALADAGIPMYDL-------------ITACTAGLADGTPLLDLTSL 176
Query: 181 EDSTIDVD---ANFVMTDSGHIVEVQGSAERATFSQDHFFAMLNLAKDRIADLIKLQKDV 237
E+S A + ++++ DH +L LA + + + V
Sbjct: 177 EESARAPGLTVAALPNREEIALLQLDER-----LHCDHLETVLELAIAGCKRVYERLRLV 231
Query: 238 IS 239
+
Sbjct: 232 LR 233