RPSBLAST alignment of GI: 254780630 and protein with PDBid: 1oys

>1oys_A Ribonuclease PH; transferase, tRNA processing; 2.40A {Bacillus subtilis} SCOP: d.14.1.4 d.101.1.1 PDB: 1oyp_A 1oyr_A Length = 245

 Score =  188 bits (477), Expect = 1e-48
 Identities = 103/239 (43%), Positives = 152/239 (63%), Gaps = 1/239 (0%)

Query: 1   MRLSGRQENQMREISLTRRVSKYAEGSCLVKFGDTHLLTTATLEEKVPMWIRNTKHGWIT 60
           MR  GRQ +++R I+       + EGS L+  G+T ++  A++E++VP ++R    GWIT
Sbjct: 1   MRHDGRQHDELRPITFDLDFISHPEGSVLITAGNTKVICNASVEDRVPPFLRGGGKGWIT 60

Query: 61  AEYGMLPRSTGNRVKREAVSGRQGGRSQEIQRMIGRALRSVVDLSALGSRQIIIDCDVIQ 120
           AEY MLP++T  +  +E+  G+  GR+ EIQR+IGRALR+VVDL  LG R I IDCDVIQ
Sbjct: 61  AEYSMLPQATNQQTIQESSKGKISGRTMEIQRLIGRALRAVVDLEKLGERTIWIDCDVIQ 120

Query: 121 ADGGTRTAAITGAWVALHDCLQHMEDCSNKFQLSQVLKGHVAAISCGMLCGYPIVDLDYG 180
           ADGGTRTA+ITGA++A+   +  +   +   + + +     A           ++DL+Y 
Sbjct: 121 ADGGTRTASITGAFLAMAIAIGKLIK-AGTIKTNPITDFLAAISVGIDKEQGILLDLNYE 179

Query: 181 EDSTIDVDANFVMTDSGHIVEVQGSAERATFSQDHFFAMLNLAKDRIADLIKLQKDVIS 239
           EDS+ +VD N +MT SG  VE+QG+ E ATFS++    +L LA+  I +LI  QK+V+ 
Sbjct: 180 EDSSAEVDMNVIMTGSGRFVELQGTGEEATFSREDLNGLLGLAEKGIQELIDKQKEVLG 238