RPSBLAST alignment of GI: 254780630 and protein with PDBid: 2ba0

>2ba0_F Archeal exosome RNA binding protein RRP41; RNAse PH, RNA degradation, exoribonuclease, S1domain, KH domain, archaeal; 2.70A {Archaeoglobus fulgidus} SCOP: d.14.1.4 d.101.1.1 PDB: 2ba1_E Length = 258

 Score =  119 bits (298), Expect = 6e-28
 Identities = 57/242 (23%), Positives = 94/242 (38%), Gaps = 20/242 (8%)

Query: 1   MRLSGRQENQMREISLTRRVSKYAEGSCLVKFGDTHLLTTATLE-EKVPMWIRNTKHGWI 59
           +RL GR+ +++R I +   V K A+GSC ++ G   ++       E  P  +++     I
Sbjct: 16  LRLDGRKFDELRPIKIEASVLKRADGSCYLEMGKNKVIAAVFGPREVHPRHLQDPSKAII 75

Query: 60  TAEYGMLPRSTGNRVKREAVSGRQGGRSQEIQRMIGRALRSVVDLSALGSRQIIIDCDVI 119
              Y M P S   R +          RS EI ++   A  +V+         I I  +V+
Sbjct: 76  RYRYNMAPFSVEERKRPG-----PDRRSIEISKVSKEAFEAVIMKELFPRSAIDIFVEVL 130

Query: 120 QADGGTRTAAITGAWVALHDCLQHMEDCSNKFQLSQVLKGHVAAISCGMLCGYPIVDLDY 179
           QAD G+RTA +  A VAL D    M+                     G   G  ++D   
Sbjct: 131 QADAGSRTACLNAASVALVDAGVPMKGMITSVA-------------VGKADGQLVLDPMK 177

Query: 180 GEDSTIDVDANFVMTDSGH-IVEVQGSAERATFSQDHFFAMLNLAKDRIADLIKLQKDVI 238
            ED+  + D  F        I  +         ++D     + LAK     + ++Q++ I
Sbjct: 178 EEDNFGEADMPFAFLIRNGKIESIALLQMDGRMTRDEVKQAIELAKKGALQIYEMQREAI 237

Query: 239 SN 240
             
Sbjct: 238 LR 239