RPSBLAST alignment of GI: 254780630 and protein with PDBid: 2je6

>2je6_A RRP42, exosome complex exonuclease 2; nuclease, hydrolase, exonuclease, phosphorolytic, exoribonuclease, RNA degradation; HET: 1PE; 1.6A {Sulfolobus solfataricus} SCOP: d.14.1.4 d.101.1.1 PDB: 2jea_A* 2jeb_A* 2br2_A 2c37_A* 2c38_A* 2c39_A* Length = 277

 Score =  120 bits (301), Expect = 3e-28
 Identities = 54/250 (21%), Positives = 86/250 (34%), Gaps = 15/250 (6%)

Query: 1   MRLSGRQENQMREISLTRRVSKYAEGSCLVKFGDTHLLTTATLEEKVPMWIRNTKHG--- 57
           +R  GR+    R +S+T   +K A+GS LVK G T +L    LE   P      +     
Sbjct: 29  IRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIV 88

Query: 58  -WITAEYGMLPRSTGNRVKREAVSGRQGGRSQEIQRMIGRALRSVVDLSALGSRQIIIDC 116
                         G   +      R   RS   +      L  +V         + +D 
Sbjct: 89  NVELLPLAYETFEPGPPDENAIELARVVDRSL--RDSKALDLTKLVIEPGKSVWTVWLDV 146

Query: 117 DVIQADGGTRTAAITGAWVALHDCLQHMED--------CSNKFQLSQVLKGHVAAISCGM 168
            V+   G    A    +  AL++   +  +          N+      L   V  IS   
Sbjct: 147 YVLDYGGNVLDACTLASVAALYNTKVYKVEQHSNGISVNKNEVVGKLPLNYPVVTISVAK 206

Query: 169 LCGYPIVDLDYGEDSTIDVDANFVMTDSGHIVEVQGSAERATFSQDHFFAMLNLAKDRIA 228
           +  Y +VD D  E+S +D   +F  T    IV +Q S +  + S        N A+    
Sbjct: 207 VDKYLVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGK-GSMSLQDIDQAENTARSTAV 265

Query: 229 DLIKLQKDVI 238
            L++  K  +
Sbjct: 266 KLLEELKKHL 275