RPSBLAST alignment of GI: 254780630 and protein with PDBid: 2wnr
>2wnr_A Probable exosome complex exonuclease 2; phosphate binding, 3'-5' exoribonuclease, hydrolase; 2.65A {Methanothermobacterthermautotrophicus} Length = 271
Score = 158 bits (400), Expect = 1e-39
Identities = 50/254 (19%), Positives = 98/254 (38%), Gaps = 22/254 (8%)
Query: 1 MRLSGRQENQMREISLTRRVSKYAEGSCLVKFGDTHLLTTATLEEKVPMWIRNTKHGWIT 60
R+ GR ++ R+IS+ V AEGS VK G+T ++ + P + G I
Sbjct: 24 ERIDGRSLHEFRDISIETGVISKAEGSSRVKLGNTQIIVGVKPQIGEPFP-DTPEMGVIL 82
Query: 61 AEYGMLPRSTGNRVKREAVSGRQGGRSQEIQRMIGRALRS--VVDLSALGS------RQI 112
+LP ++ G RS E+ R++ R +R ++DL L +
Sbjct: 83 TNSELLPMASPTFEP-----GPPDERSVELSRVVDRCIRESRMIDLEKLCIIEGSKVWML 137
Query: 113 IIDCDVIQADGGTRTAAITGAWVALHDCLQHMED-------CSNKFQLSQVLKGHVAAIS 165
+D +I DG AA+ AL D + + + + +
Sbjct: 138 FLDLHIIDYDGNLFDAAVLATVAALLDTRIPAAEVEDGEVVINREKMQPLPVNRKALMCT 197
Query: 166 CGMLCGYPIVDLDYGEDSTIDVDANFVMTDSGHIVEVQGSAERATFSQDHFFAMLNLAKD 225
+ ++D E+ + + +T+ G I +Q E ++D +++A +
Sbjct: 198 FAKIGNEIVLDPSLEEEDILTARISIGVTEEGSICAMQKGGE-GPLTRDDVLKAVSIAVE 256
Query: 226 RIADLIKLQKDVIS 239
++ LI+ ++
Sbjct: 257 KVPQLIEYLDKSMT 270