RPSBLAST alignment of GI: 254780630 and protein with PDBid: 2wp8

>2wp8_B Exosome complex component SKI6; nucleus, hydrolase, cytoplasm, RNA-binding, RNA binding, mitochondrion, rRNA processing; 3.00A {Saccharomyces cerevisiae} Length = 246

 Score =  111 bits (279), Expect = 1e-25
 Identities = 45/241 (18%), Positives = 87/241 (36%), Gaps = 21/241 (8%)

Query: 1   MRLSGRQENQMREISLTR-RVSKYAEGSCLVKFGDTHLLTTATLE-EKVPMWIRNTKHGW 58
           +RL GR+ N++R    +       A+GS  ++ G+  ++T      E       +T    
Sbjct: 12  LRLDGRRWNELRRFESSINTHPHAADGSSYMEQGNNKIITLVKGPKEPRLKSQMDTSKAL 71

Query: 59  ITAEYGMLPRSTGNRVKREAVSGRQGGRSQEIQRMIGRALRSVVDLSALGSRQIIIDCDV 118
           +     +   S   R K    S +   R  EIQ  + R     V L+      I I+  V
Sbjct: 72  LNVSVNINKFSKFERSKS---SHKNERRVLEIQTSLVRMFEKNVMLNIYPRTVIDIEIHV 128

Query: 119 IQADGGTRTAAITGAWVALHDCLQHMEDCSNKFQLSQVLKGHVAAISCGMLCGYPIVDLD 178
           ++ DGG   + I G  +AL D    M               +++ IS G+    P++D +
Sbjct: 129 LEQDGGIMGSLINGITLALIDAGISM-------------FDYISGISVGLYDTTPLLDTN 175

Query: 179 YGEDSTIDVDANFVMTDSGHIVEVQGSAERATFSQDHFFAMLNLAKDRIADLIKLQKDVI 238
             E++ +       +      + +    ++     D    +L +       +  L  + +
Sbjct: 176 SLEENAMS-TVTLGVVGKSEKLSLLLVEDKIPL--DRLENVLAIGIAGAHRVRDLMDEEL 232

Query: 239 S 239
            
Sbjct: 233 R 233