RPSBLAST alignment of GI: 254780630 and protein with PDBid: 3dd6

>3dd6_A Ribonuclease PH; exoribonuclease, tRNA maturation, RNAse PH., transferase; 1.70A {Bacillus anthracis} Length = 255

 Score =  194 bits (494), Expect = 1e-50
 Identities = 112/241 (46%), Positives = 161/241 (66%), Gaps = 3/241 (1%)

Query: 1   MRLSGRQENQMREISLTRRVSKYAEGSCLVKFGDTHLLTTATLEEKVPMWIRNTKHGWIT 60
           MR+ GR++ ++R I +     K+ EGS L++ GDT ++ +AT+EE+VP ++R    GW+T
Sbjct: 11  MRVDGREKTELRHIHIHTNYLKHPEGSVLIEVGDTKVICSATIEERVPPFMRGEGKGWVT 70

Query: 61  AEYGMLPRSTGNRVKREAVSGRQGGRSQEIQRMIGRALRSVVDLSALGSRQIIIDCDVIQ 120
           AEY M+PR+T  R  RE+  G+  GR+ EIQR+IGRALR+VVDL ALG R + IDCDVIQ
Sbjct: 71  AEYAMIPRATEQRTIRESSKGKVTGRTMEIQRLIGRALRAVVDLEALGERTVWIDCDVIQ 130

Query: 121 ADGGTRTAAITGAWVALHDCLQHMEDCSNKFQLSQVLKGHVAAISCGMLCGYPIV-DLDY 179
           ADGGTRTA+ITGA+VA+    + +       ++   +K ++AA S G++    +V DL+Y
Sbjct: 131 ADGGTRTASITGAYVAMVLAFEKLLQAEKVSKI--PVKDYLAATSVGIVEEQGVVLDLNY 188

Query: 180 GEDSTIDVDANFVMTDSGHIVEVQGSAERATFSQDHFFAMLNLAKDRIADLIKLQKDVIS 239
            EDS  DVD N +MT  G  VEVQG+ E ATFS+     +L+ A+  I  LI +QK+ + 
Sbjct: 189 AEDSKADVDMNVIMTGKGQFVEVQGTGEEATFSRAQLNELLDAAEQGIFQLIDIQKEALG 248

Query: 240 N 240
           +
Sbjct: 249 D 249