Query gi|254780632|ref|YP_003065045.1| hypothetical protein CLIBASIA_02595 [Candidatus Liberibacter asiaticus str. psy62] Match_columns 71 No_of_seqs 1 out of 3 Neff 1.0 Searched_HMMs 33803 Date Wed Jun 1 14:57:27 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780632.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 >3b5h_A Cervical EMMPRIN, HAB1 14.2 76 0.0022 14.7 1.3 50 17-66 10-68 (82) 2 >1eg1_A Endoglucanase I; mutat 14.0 53 0.0016 15.6 0.4 23 12-37 87-109 (331) 3 >2ovw_A Endoglucanase I; glyco 14.0 50 0.0015 15.7 0.3 22 12-36 126-147 (411) 4 >1ojj_A Endoglucanase I; hydro 13.2 61 0.0018 15.2 0.6 23 12-37 128-150 (402) 5 >2rfw_A Cellulose 1,4-beta-cel 11.5 88 0.0026 14.4 0.9 22 13-37 87-108 (349) 6 >2v3i_A Exoglucanase 1; hydrol 8.5 99 0.0029 14.1 0.3 21 13-36 127-147 (434) 7 >1gpi_A Exoglucanase I; hydrol 8.3 1.1E+02 0.0032 13.8 0.4 21 13-36 83-103 (351) 8 >2ri9_A Mannosyl-oligosacchari 7.6 64 0.0019 15.1 -1.0 19 3-21 50-68 (132) 9 >2gak_A Beta-1,6-N-acetylgluco 7.4 68 0.002 15.0 -1.0 16 7-22 37-52 (71) 10 >1l6s_A Porphobilinogen syntha 7.0 1.9E+02 0.0057 12.5 1.2 22 25-46 209-230 (298) No 1 >>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} (A:1-82) Probab=14.22 E-value=76 Score=14.74 Aligned_cols=50 Identities=22% Similarity=0.311 Sum_probs=25.5 Q ss_pred ECCCCEEEEEECCCCCEEEEEC--------CHHH-HHHCCCCEEEEEECCCCCEEEEEE Q ss_conf 4168326898237761466413--------1133-001025268889717622176677 Q gi|254780632|r 17 VDMSPAVQLQCGLGSSIVAVKP--------VVPY-ITDVARGQINVRLGDNYGVLHSVD 66 (71) Q Consensus 17 vdmspavqlqcglgssivavkp--------vvpy-itdvargqinvrlgdnygvlhsvd 66 (71) .++...++|||-|-+|-..++- +++- -..-..-+.+|...|.-|..+-|= T Consensus 10 ~~~~~k~~LtCnLt~s~~~i~ghrW~K~gkvlked~~~~~~tey~V~~~D~sGeY~CvF 68 (82) T 3b5h_A 10 EDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVF 68 (82) T ss_dssp EEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCCCSEEEEEECGGGCCEEEEEEE T ss_pred ECCCCCEEEEEEECCCCCCEEEEEEEECCEECCCCCCCCCEEEEEECCHHHCCCEEEEE T ss_conf 85998699999951899982479999899995243678758999972589997589999 No 2 >>1eg1_A Endoglucanase I; mutation, cellulose degradation; HET: NAG; 3.60A {Hypocrea jecorina} (A:1-37,A:78-371) Probab=14.03 E-value=53 Score=15.58 Aligned_cols=23 Identities=39% Similarity=0.648 Sum_probs=16.6 Q ss_pred HEEEEECCCCEEEEEECCCCCEEEEE Q ss_conf 20137416832689823776146641 Q gi|254780632|r 12 MVSFRVDMSPAVQLQCGLGSSIVAVK 37 (71) Q Consensus 12 mvsfrvdmspavqlqcglgssivavk 37 (71) -.+|.|||| +|.||+-..+--+. T Consensus 87 EftFDVD~S---~lpCGlNgALYfve 109 (331) T 1eg1_A 87 ELSFDVDLS---ALPCGENGSLYLSQ 109 (331) T ss_dssp EEEEEECTT---SCCTTEEEEEEEEC T ss_pred EEEEEEECC---CCCCCCEEEEEEEE T ss_conf 068886337---88753200444442 No 3 >>2ovw_A Endoglucanase I; glycosyl hydrolase, complexed with cellobiose, glycosylated protein; HET: NAG CBI; 2.30A {Fusarium oxysporum} (A:) Probab=13.99 E-value=50 Score=15.75 Aligned_cols=22 Identities=32% Similarity=0.685 Sum_probs=16.4 Q ss_pred HEEEEECCCCEEEEEECCCCCEEEE Q ss_conf 2013741683268982377614664 Q gi|254780632|r 12 MVSFRVDMSPAVQLQCGLGSSIVAV 36 (71) Q Consensus 12 mvsfrvdmspavqlqcglgssivav 36 (71) -.+|-|||| +|.||+-..+--+ T Consensus 126 EftFDVD~S---~lpCGlNgALYfv 147 (411) T 2ovw_A 126 EFSFDVEME---KLPCGMNGALYLS 147 (411) T ss_dssp EEEEEEECT---TCCTTEEEEEEEE T ss_pred EEEEEEECC---CCCCCCEEEEEEE T ss_conf 688876335---6876432256566 No 4 >>1ojj_A Endoglucanase I; hydrolase, cellulose degradation, glycosynthase; HET: BGC GAL GLC NAG; 1.4A {Humicola insolens} (A:) Probab=13.23 E-value=61 Score=15.24 Aligned_cols=23 Identities=30% Similarity=0.664 Sum_probs=16.7 Q ss_pred HEEEEECCCCEEEEEECCCCCEEEEE Q ss_conf 20137416832689823776146641 Q gi|254780632|r 12 MVSFRVDMSPAVQLQCGLGSSIVAVK 37 (71) Q Consensus 12 mvsfrvdmspavqlqcglgssivavk 37 (71) -.+|-|||| +|.||+-+.+--+. T Consensus 128 EftFDVD~S---~lpCGlNgALYfve 150 (402) T 1ojj_A 128 EFTFDVDAT---KLPCGMNSALYLSE 150 (402) T ss_dssp EEEEEEECT---TCCTTCEEEEEEEC T ss_pred EEEEEEECC---CCCCCCCCEEEEEE T ss_conf 178985345---68766500476772 No 5 >>2rfw_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycosidase; 1.60A {Melanocarpus albomyces} PDB: 2rfy_A* 2rfz_A* 2rg0_A* (A:1-37,A:78-164,A:206-430) Probab=11.52 E-value=88 Score=14.36 Aligned_cols=22 Identities=36% Similarity=0.806 Sum_probs=16.4 Q ss_pred EEEEECCCCEEEEEECCCCCEEEEE Q ss_conf 0137416832689823776146641 Q gi|254780632|r 13 VSFRVDMSPAVQLQCGLGSSIVAVK 37 (71) Q Consensus 13 vsfrvdmspavqlqcglgssivavk 37 (71) ..|.||+| +|.|||...+--|. T Consensus 87 ftfdvDvS---~lpCGlNgAlyf~~ 108 (349) T 2rfw_A 87 LAFDVDLS---TVECGINSALYFVA 108 (349) T ss_dssp EEEEEECT---TCCTTCCCEEEEEC T ss_pred EEEEEECC---CCCCCCEEEEEEEE T ss_conf 78875335---68765411565763 No 6 >>2v3i_A Exoglucanase 1; hydrolase, glycosidase, glycoprotein, carbohydrate metabolism, polysaccharide degradation, pyrrolidone carboxylic acid; HET: NAG XX6; 1.05A {Hypocrea jecorina} (A:) Probab=8.46 E-value=99 Score=14.08 Aligned_cols=21 Identities=52% Similarity=0.860 Sum_probs=15.7 Q ss_pred EEEEECCCCEEEEEECCCCCEEEE Q ss_conf 013741683268982377614664 Q gi|254780632|r 13 VSFRVDMSPAVQLQCGLGSSIVAV 36 (71) Q Consensus 13 vsfrvdmspavqlqcglgssivav 36 (71) .+|-|||| +|.|||-..+--| T Consensus 127 ftFDVD~S---~lpCGlNgALYfv 147 (434) T 2v3i_A 127 FSFDVDVS---QLPCGLNGALYFV 147 (434) T ss_dssp EEEEEECT---TCCTTEEEEEEEE T ss_pred EEEEECCC---CCCCCCEEEEEEE T ss_conf 78875134---5875441156666 No 7 >>1gpi_A Exoglucanase I; hydrolase, glycosidase, cellulase, beta-glucanase, glycoprotein, cellulose degradation, enzyme, reaction center; HET: NAG; 1.32A {Phanerochaete chrysosporium} (A:1-37,A:79-161,A:201-431) Probab=8.29 E-value=1.1e+02 Score=13.84 Aligned_cols=21 Identities=43% Similarity=0.808 Sum_probs=15.5 Q ss_pred EEEEECCCCEEEEEECCCCCEEEE Q ss_conf 013741683268982377614664 Q gi|254780632|r 13 VSFRVDMSPAVQLQCGLGSSIVAV 36 (71) Q Consensus 13 vsfrvdmspavqlqcglgssivav 36 (71) ..|.||+| +|.|||...+--| T Consensus 83 ftfdvd~s---~lpCGlNgAlyf~ 103 (351) T 1gpi_A 83 FTFDVDMS---NLPCGLNGALYLS 103 (351) T ss_dssp EEEEEECT---TCCTTCEEEEEEE T ss_pred EEEECCCC---CCCCCCCCEEEEE T ss_conf 45520125---6876656506787 No 8 >>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprotein, glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} (A:1-45,A:367-453) Probab=7.63 E-value=64 Score=15.13 Aligned_cols=19 Identities=32% Similarity=0.382 Sum_probs=15.1 Q ss_pred CCHHHHHHHHEEEEECCCC Q ss_conf 6467887532013741683 Q gi|254780632|r 3 NGPETLESLMVSFRVDMSP 21 (71) Q Consensus 3 ngpetleslmvsfrvdmsp 21 (71) --||++||+..-+|+.-.| T Consensus 50 LRPE~iES~fylyR~Tgd~ 68 (132) T 2ri9_A 50 LRPEVIESFYYAHRVTGKE 68 (132) T ss_dssp SCCHHHHHHHHHHHHHCCH T ss_pred CCHHHHHHHHHHHHHHCCH T ss_conf 8757999999999984898 No 9 >>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* (A:1-47,A:368-391) Probab=7.37 E-value=68 Score=15.00 Aligned_cols=16 Identities=44% Similarity=0.688 Sum_probs=13.5 Q ss_pred HHHHHHEEEEECCCCE Q ss_conf 8875320137416832 Q gi|254780632|r 7 TLESLMVSFRVDMSPA 22 (71) Q Consensus 7 tleslmvsfrvdmspa 22 (71) .||.|-|+||-|..|- T Consensus 37 kLE~LTVkfkkdvd~f 52 (71) T 2gak_A 37 KLEILTVQFKKDVDPF 52 (71) T ss_dssp HHHHHCHHHHTTTCHH T ss_pred HHHHHEECCCCCCCHH T ss_conf 5432200136764888 No 10 >>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} (A:26-323) Probab=7.02 E-value=1.9e+02 Score=12.48 Aligned_cols=22 Identities=32% Similarity=0.463 Sum_probs=16.2 Q ss_pred EEECCCCCEEEEECCHHHHHHC Q ss_conf 9823776146641311330010 Q gi|254780632|r 25 LQCGLGSSIVAVKPVVPYITDV 46 (71) Q Consensus 25 lqcglgssivavkpvvpyitdv 46 (71) +..--|..++-|||-.||.--+ T Consensus 209 ~D~~EGAD~vMVKPal~YLDIi 230 (298) T 1l6s_A 209 LDEAQGADCLMVKPAGAYLDIV 230 (298) T ss_dssp HHHHTTCSBEEEESCTTCHHHH T ss_pred HHHHCCCCEEEECCCHHHHHHH T ss_conf 3144298658840441378899 Done!