HHsearch alignment for GI: 254780633 and conserved domain: COG1402
>COG1402 Uncharacterized protein, putative amidase [General function prediction only].
Probab=100.00 E-value=0 Score=423.62 Aligned_cols=242 Identities=35% Similarity=0.566 Sum_probs=208.0
Q ss_pred CHHHCCHHHHHH-C-CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCCCC
Q ss_conf 046669798973-1-04988999320012479746522678999999999998356677399914023267801136887
Q gi|254780633|r 6 IFTDNSLPLCAD-A-RKDWIVVLPLGAYEQHGPHLPMNTDTIIAAGLAERIKSILPPRLPVTCMPVEPIGYSIEHMYVDG 83 (267)
Q Consensus 6 ~~~~lT~~e~~~-~-~~~~vvilPvGs~EqHGpHlPlgtD~~~a~~ia~~~a~~~~~~~~~~v~P~i~yG~s~~h~~fpG 83 (267)
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~ilPvGS~EQHGPhlPlgTD~~ia~~ia~~~~~~~~~~--a~vlP~i~yG~s~eH~~fpG 79 (250)
T COG1402 2 MLLDLTWSELIRQLDKETTIIILPVGSTEQHGPHLPLGTDALIAEAIAEKVAERLGAE--ALVLPTIYYGVSLEHMGFPG 79 (250)
T ss_pred CCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC--EEEECCCCCCCCHHHCCCCC
T ss_conf 3100114355531035684399843652355777775422899999999999971897--28817660202564447995
Q ss_pred CEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEE--ECCCCCCCHHHHCCCCCCCC
Q ss_conf 3330999999999999999997499889997398786789999999986355839998--24765456564136655667
Q gi|254780633|r 84 TKTLTYAEAIEHWLAIIDAIRKMGIRKIVILNAHGGNSPLVSIVSTEARMRFSMLVVS--TSWSRFTIPQGIISFPETEI 161 (267)
Q Consensus 84 Tisl~~~t~~~~l~di~~sl~~~Gf~~iviiNgHgGN~~~l~~a~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 161 (267)
T Consensus 80 Titl~~~t~~~~~~~~~~Sl~~~Gfrk~v~vNgHGGN~~~l~~v~~el~~~~~~~~V~~~~~~~~~~~~~~~~~~---~~ 156 (250)
T COG1402 80 TITLSPETLIALLVELVESLARHGFRKFVIVNGHGGNSAALEIVARELRAELGDLAVAVFFPWQRPEGIWGLLSG---IY 156 (250)
T ss_pred EEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCEECCCHHHHHCC---CC
T ss_conf 287268889999999999999638637999945887488999999999976140343212540221430433156---54
Q ss_pred CCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCC-CHHCCCCCCCCCCCCCCCCCHHHCCCCCCEE-CCCCCCHHHHHHHH
Q ss_conf 886877999999997813268332466764432-0001340001377633202288809881041-44307999999999
Q gi|254780633|r 162 GIHGGEIETSMMLALAPHLVKMDLAENFSSRQS-EFLRNFKYLRAHGSHSFGWSMKDLNPKGVVG-NAMDATVKKGEGLL 239 (267)
Q Consensus 162 g~HAge~ETS~~lal~PelV~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~Gv~G-dP~~At~E~G~~~~ 239 (267)
T Consensus 157 ~~Hag~~EtS~~l~l~p~~v~~~~~~~~~~~~~~~~~~~~------g~~~~~~~~~~~~~~Gv~G~d~~~ataE~G~~~~ 230 (250)
T COG1402 157 GIHAGDIETSLMLHLGPELVDMERAVDPFPIEQAPESPLV------GLHPFAWDARAFSKDGVVGSDPTLATAEKGEKIL 230 (250)
T ss_pred CCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCC------CCCCCHHHHHHCCCCCEEECCCCCCCHHHHHHHH
T ss_conf 6656713456788719776627751056765666654222------5442023565418986551686747888899999
Q ss_pred HHHHHHHHHHHHHHHHCCC
Q ss_conf 9999999999999995853
Q gi|254780633|r 240 SYFANCFIQLLNDINSFDV 258 (267)
Q Consensus 240 ~~~v~~l~~~i~e~~~~~~ 258 (267)
T Consensus 231 ~~avd~lv~~i~~~~~~~~ 249 (250)
T COG1402 231 EAAVDGLVELIREFMAFDP 249 (250)
T ss_pred HHHHHHHHHHHHHHHHHCC
T ss_conf 9999999999999986515