HHsearch alignment for GI: 254780634 and conserved domain: COG0286
>COG0286 HsdM Type I restriction-modification system methyltransferase subunit [Defense mechanisms].
Probab=97.25 E-value=0.00093 Score=45.27 Aligned_cols=167 Identities=19% Similarity=0.184 Sum_probs=104.6
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCC---CCEEHHHHCCHHHHHHHHHHHHHCCCC-CCEE
Q ss_conf 548984155654211236666625860134688279999998616---881005524989999999998750288-6088
Q gi|254780634|r 211 GWFEIQDEGSQIVSNLTAITNSSQILDFCAGGGGKTLALSMLLNN---KGQIHAWDNNKSRMAPIVARIKRAGIH-NVQL 286 (429)
Q Consensus 211 G~~~VQD~aSql~~~~l~~~~g~~vLD~CAapGGKt~~la~~~~~---~g~i~A~D~~~~Rl~~l~~~~~r~g~~-~v~~ 286 (429)
T Consensus 166 GEfyTP~~v~~liv~~l~~~~~~~i~DpacGsgg~l~~a~~~~~~~~~~~~~yGqE~~~~t~~l~~mN~~lhgi~~~~~i 245 (489)
T COG0286 166 GEFYTPREVSELIVELLDPEPRNSIYDPACGSGGMLLQAAKYLKRHQDEIFIYGQEINDTTYRLAKMNLILHGIEGDANI 245 (489)
T ss_pred CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 86058799999999975776565234733540379999999997515550499895668899999961166278742234
Q ss_pred EECCCCCCC------CCCCCCEEEECCCCCCCHHHHHH-HH-HHHHC------CHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 215543445------72324678962754450444442-23-66724------967899999987899999999608983
Q gi|254780634|r 287 HSSWESLRN------LQEHFTTVLVDAPCSGTGTWRRR-PD-IKWRL------SQKNLIERTEEQKKILEESAQFVRPEG 352 (429)
Q Consensus 287 ~~~~~~~~~------~~~~fd~vl~DaPCSg~G~~rr~-Pe-~~w~~------~~~~~~~~~~lQ~~iL~~a~~~lk~gG 352 (429)
T Consensus 246 ~~~dtl~~~~~~~~~~~~~~D~viaNPPf~~~~w~~~~~~~~~~~~~~~~g~~~~~~~~d-----~afi~h~~~~l~~~g 320 (489)
T COG0286 246 RHGDTLSNPKHDDKDDKGKFDFVIANPPFSGKGWGGDLLESEQDERFFFYGVFPTKNSAD-----LAFLQHILYKLKPGG 320 (489)
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHH-----HHHHHHHHHHCCCCC
T ss_conf 334423687332346655501686579955444344331002432000257788895278-----999999999718677
Q ss_pred E--EEEEECCCCHHHCHHHHHHHHHHCCCCEE
Q ss_conf 8--99977588824299989999985799799
Q gi|254780634|r 353 Y--LVYITCSILPEENIQQINYFLSKNPHFSI 382 (429)
Q Consensus 353 ~--lvYsTCS~~~~Ene~vv~~fL~~~~~~~~ 382 (429)
T Consensus 321 ~aaivl~~gvlfr~~~e~~IR~~l~~~~~~~~ 352 (489)
T COG0286 321 RAAIVLPDGVLFRGGAEKDIRKDLLEDNLLEA 352 (489)
T ss_pred CEEEEECCCCCCCCCCHHHHHHHHHHHHHHEE
T ss_conf 05899258866277722579999875031335