HHsearch alignment for GI: 254780634 and conserved domain: COG2518
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones].
Probab=98.67 E-value=2e-07 Score=70.29 Aligned_cols=106 Identities=16% Similarity=0.246 Sum_probs=87.4
Q ss_pred CCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCC-CCCCC
Q ss_conf 21123666662586013468827999999861688100552498999999999875028860882155434457-23246
Q gi|254780634|r 223 VSNLTAITNSSQILDFCAGGGGKTLALSMLLNNKGQIHAWDNNKSRMAPIVARIKRAGIHNVQLHSSWESLRNL-QEHFT 301 (429)
Q Consensus 223 ~~~~l~~~~g~~vLD~CAapGGKt~~la~~~~~~g~i~A~D~~~~Rl~~l~~~~~r~g~~~v~~~~~~~~~~~~-~~~fd 301 (429)
T Consensus 64 m~~~L~~~~g~~VLEIGtGsGY~aAvla~l~~---~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G~~~~aPyD 140 (209)
T COG2518 64 MLQLLELKPGDRVLEIGTGSGYQAAVLARLVG---RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKGWPEEAPYD 140 (209)
T ss_pred HHHHHCCCCCCEEEEECCCCHHHHHHHHHHHC---EEEEEEECHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC
T ss_conf 99974899998688877783099999999748---499999719999999999997698734999788556887779847
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf 7896275445044444223667249678999999878999999996089838999775
Q gi|254780634|r 302 TVLVDAPCSGTGTWRRRPDIKWRLSQKNLIERTEEQKKILEESAQFVRPEGYLVYITC 359 (429)
Q Consensus 302 ~vl~DaPCSg~G~~rr~Pe~~w~~~~~~~~~~~~lQ~~iL~~a~~~lk~gG~lvYsTC 359 (429)
T Consensus 141 ~I~Vtaaa~~v--------------P~~L--------------l~QL~~gGrlv~PvG 170 (209)
T COG2518 141 RIIVTAAAPEV--------------PEAL--------------LDQLKPGGRLVIPVG 170 (209)
T ss_pred EEEEEECCCCC--------------CHHH--------------HHHCCCCCEEEEEEC
T ss_conf 89995035779--------------9899--------------985065988999985