HHsearch alignment for GI: 254780634 and conserved domain: PRK04338

>PRK04338 N(2),N(2)-dimethylguanosine tRNA methyltransferase; Provisional.
Probab=98.01  E-value=3.3e-05  Score=55.11  Aligned_cols=109  Identities=16%  Similarity=0.204  Sum_probs=79.9

Q ss_pred             CCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCC--CCCCCCCEEE
Q ss_conf             36666625860134688279999998616881005524989999999998750288608821554344--5723246789
Q gi|254780634|r  227 TAITNSSQILDFCAGGGGKTLALSMLLNNKGQIHAWDNNKSRMAPIVARIKRAGIHNVQLHSSWESLR--NLQEHFTTVL  304 (429)
Q Consensus       227 l~~~~g~~vLD~CAapGGKt~~la~~~~~~g~i~A~D~~~~Rl~~l~~~~~r~g~~~v~~~~~~~~~~--~~~~~fd~vl  304 (429)
T Consensus        47 ~~~~~~~~ilDalsasGiR~iRy~~E~~-~~~v~~NDi~~~a~~~i~~N~~~N~~~~~~v~~~dAn~lm~~~~~~fD~ID  125 (376)
T PRK04338         47 FGPKRRKSVLDALSASGIRGIRYALETG-VEKVILNDINPDAVELIKKNLELNGLENAEVFNEDANVLLHENERKFDVVD  125 (376)
T ss_pred             HHCCCCCEEEECCCCCCHHHHHHHHHCC-CCEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCEEE
T ss_conf             7420697687406765499999987279-987999569999999999999982998269813248999983787587786


Q ss_pred             ECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCH
Q ss_conf             62754450444442236672496789999998789999999960898389997758882
Q gi|254780634|r  305 VDAPCSGTGTWRRRPDIKWRLSQKNLIERTEEQKKILEESAQFVRPEGYLVYITCSILP  363 (429)
Q Consensus       305 ~DaPCSg~G~~rr~Pe~~w~~~~~~~~~~~~lQ~~iL~~a~~~lk~gG~lvYsTCS~~~  363 (429)
T Consensus       126 lDPfGS----------------p~----------pflDsAi~~v~~~G-lL~vTaTD~a  157 (376)
T PRK04338        126 IDPFGS----------------PA----------PFLDSAIRALRRGG-LLCVTATDTA  157 (376)
T ss_pred             ECCCCC----------------CC----------HHHHHHHHHHHCCC-EEEEEECCCC
T ss_conf             789999----------------20----------87999999840398-8999946861