HHsearch alignment for GI: 254780634 and conserved domain: PRK05134
>PRK05134 3-demethylubiquinone-9 3-methyltransferase; Provisional.
Probab=98.76 E-value=3.8e-08 Score=75.14 Aligned_cols=108 Identities=15% Similarity=0.249 Sum_probs=80.6
Q ss_pred CCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEHHHHCCHHHHHHHHHHHHHCCCCCCEEEECC--CCCCCCCCCCCEEE
Q ss_conf 3666662586013468827999999861688100552498999999999875028860882155--43445723246789
Q gi|254780634|r 227 TAITNSSQILDFCAGGGGKTLALSMLLNNKGQIHAWDNNKSRMAPIVARIKRAGIHNVQLHSSW--ESLRNLQEHFTTVL 304 (429)
Q Consensus 227 l~~~~g~~vLD~CAapGGKt~~la~~~~~~g~i~A~D~~~~Rl~~l~~~~~r~g~~~v~~~~~~--~~~~~~~~~fd~vl 304 (429)
T Consensus 44 ~~~l~G~~ILDVGCGgG~lse~LAr~---Ga~VtGID~S~~~I~~Ar~ha~~~~l-~i~y~~~~~e~l~~~~~~~FDvV~ 119 (233)
T PRK05134 44 AGGLFGKRVLDVGCGGGILSESMARL---GATVTGIDASEENIEVARLHALESGL-KIDYRQITAEELAAEHPGQFDVVT 119 (233)
T ss_pred CCCCCCCEEEEECCCCCHHHHHHHHC---CCEEEEECCCHHHHHHHHHHHHHCCC-CCEEEECCHHHHHHHCCCCEEEEE
T ss_conf 14668998999755897112899967---99799987998999999998564434-511675147665430578634774
Q ss_pred ECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf 62754450444442236672496789999998789999999960898389997758
Q gi|254780634|r 305 VDAPCSGTGTWRRRPDIKWRLSQKNLIERTEEQKKILEESAQFVRPEGYLVYITCS 360 (429)
Q Consensus 305 ~DaPCSg~G~~rr~Pe~~w~~~~~~~~~~~~lQ~~iL~~a~~~lk~gG~lvYsTCS 360 (429)
T Consensus 120 ~------~EVlEHV----------------~d~~~~l~~~~rlLKPGG~l~lsTiN 153 (233)
T PRK05134 120 C------MEMLEHV----------------PDPASFIRACAKLVKPGGLVFFSTLN 153 (233)
T ss_pred E------EHHHHHC----------------CCHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 4------2147753----------------89999999999973899149997267