HHsearch alignment for GI: 254780634 and conserved domain: PRK09422

Probab=94.11  E-value=0.15  Score=30.19  Aligned_cols=100  Identities=18%  Similarity=0.194  Sum_probs=59.3

Q ss_pred             CCCCCCCCEEEECCCCCCHHH-HHHHHHHCCCCEEHHHHCCHHHHHHHHHHHHHCCCCCCEEEE-CCC---CCCCCCCCC
Q ss_conf             236666625860134688279-999998616881005524989999999998750288608821-554---344572324
Q gi|254780634|r  226 LTAITNSSQILDFCAGGGGKT-LALSMLLNNKGQIHAWDNNKSRMAPIVARIKRAGIHNVQLHS-SWE---SLRNLQEHF  300 (429)
Q Consensus       226 ~l~~~~g~~vLD~CAapGGKt-~~la~~~~~~g~i~A~D~~~~Rl~~l~~~~~r~g~~~v~~~~-~~~---~~~~~~~~f  300 (429)
T Consensus       157 ~~~~~~G~~VlV~GaGgvG~~aiq~ak~~~-g~~Vi~~~~~~~k~~~a~----~lGad~vi~~~~~~~~~~~~~~~~gg~  231 (338)
T PRK09422        157 VSGIKPGQWIAIYGAGGLGNLALQYAKNVF-NAKVIAVDINDDKLALAK----EVGADLTINSKRVEDVAKIIQEKTGGA  231 (338)
T ss_pred             HHCCCCCCEEEEECCCHHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHH----HCCCCEEECCCCCCCHHHHHHHHCCCC
T ss_conf             848999988999688689999999999808-986999989999999999----729989981887434999999950997


Q ss_pred             CEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             6789627544504444422366724967899999987899999999608983899977
Q gi|254780634|r  301 TTVLVDAPCSGTGTWRRRPDIKWRLSQKNLIERTEEQKKILEESAQFVRPEGYLVYIT  358 (429)
Q Consensus       301 d~vl~DaPCSg~G~~rr~Pe~~w~~~~~~~~~~~~lQ~~iL~~a~~~lk~gG~lvYsT  358 (429)
T Consensus       232 ~~~v~~~~---~~~--------------~-----------~~~~~~~l~~gG~~v~vG  261 (338)
T PRK09422        232 HAAVVTAV---AKA--------------A-----------FNQAVDAVRAGGRVVAVG  261 (338)
T ss_pred             CEEEEECC---CHH--------------H-----------HHHHHHHHHCCCEEEEEC
T ss_conf             76999678---789--------------9-----------999999811699999987