HHsearch alignment for GI: 254780634 and conserved domain: PRK11760
>PRK11760 putative RNA 2'-O-ribose methyltransferase; Provisional.
Probab=95.60 E-value=0.018 Score=36.51 Aligned_cols=78 Identities=17% Similarity=0.127 Sum_probs=52.2
Q ss_pred CCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCEEEECC
Q ss_conf 66666258601346882799999986168810055249899999999987502886088215543445723246789627
Q gi|254780634|r 228 AITNSSQILDFCAGGGGKTLALSMLLNNKGQIHAWDNNKSRMAPIVARIKRAGIHNVQLHSSWESLRNLQEHFTTVLVDA 307 (429)
Q Consensus 228 ~~~~g~~vLD~CAapGGKt~~la~~~~~~g~i~A~D~~~~Rl~~l~~~~~r~g~~~v~~~~~~~~~~~~~~~fd~vl~Da 307 (429)
T Consensus 207 rl~~Gm~aVDLGAaPGGWT~qLv~r---g~~V~AVDnG~m~-----~~L~~~~~-V~H~~~dgf~f~P~~~~vdwlVCDm 277 (356)
T PRK11760 207 RLASGMRAVDLGACPGGWTYQLVRR---GMFVTAVDNGPMA-----ESLMDTGQ-VEHLRADGFKFRPTRKNVDWLVCDM 277 (356)
T ss_pred HCCCCCEEEECCCCCCHHHHHHHHC---CCEEEEECCCCCC-----HHHHCCCC-EEEEECCCEEECCCCCCEEEEEEEC
T ss_conf 2169975875586997058999977---9889986587678-----75752887-5788146705636998520899705
Q ss_pred CCCCCHH
Q ss_conf 5445044
Q gi|254780634|r 308 PCSGTGT 314 (429)
Q Consensus 308 PCSg~G~ 314 (429)
T Consensus 278 vekP~rv 284 (356)
T PRK11760 278 VEKPARV 284 (356)
T ss_pred CCCHHHH
T ss_conf 3688999