HHsearch alignment for GI: 254780634 and conserved domain: PRK11760

>PRK11760 putative RNA 2'-O-ribose methyltransferase; Provisional.
Probab=95.60  E-value=0.018  Score=36.51  Aligned_cols=78  Identities=17%  Similarity=0.127  Sum_probs=52.2

Q ss_pred             CCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCEEEECC
Q ss_conf             66666258601346882799999986168810055249899999999987502886088215543445723246789627
Q gi|254780634|r  228 AITNSSQILDFCAGGGGKTLALSMLLNNKGQIHAWDNNKSRMAPIVARIKRAGIHNVQLHSSWESLRNLQEHFTTVLVDA  307 (429)
Q Consensus       228 ~~~~g~~vLD~CAapGGKt~~la~~~~~~g~i~A~D~~~~Rl~~l~~~~~r~g~~~v~~~~~~~~~~~~~~~fd~vl~Da  307 (429)
T Consensus       207 rl~~Gm~aVDLGAaPGGWT~qLv~r---g~~V~AVDnG~m~-----~~L~~~~~-V~H~~~dgf~f~P~~~~vdwlVCDm  277 (356)
T PRK11760        207 RLASGMRAVDLGACPGGWTYQLVRR---GMFVTAVDNGPMA-----ESLMDTGQ-VEHLRADGFKFRPTRKNVDWLVCDM  277 (356)
T ss_pred             HCCCCCEEEECCCCCCHHHHHHHHC---CCEEEEECCCCCC-----HHHHCCCC-EEEEECCCEEECCCCCCEEEEEEEC
T ss_conf             2169975875586997058999977---9889986587678-----75752887-5788146705636998520899705


Q ss_pred             CCCCCHH
Q ss_conf             5445044
Q gi|254780634|r  308 PCSGTGT  314 (429)
Q Consensus       308 PCSg~G~  314 (429)
T Consensus       278 vekP~rv  284 (356)
T PRK11760        278 VEKPARV  284 (356)
T ss_pred             CCCHHHH
T ss_conf             3688999