HHsearch alignment for GI: 254780634 and conserved domain: pfam02005
>pfam02005 TRM N2,N2-dimethylguanosine tRNA methyltransferase. This enzyme EC:2.1.1.32 used S-AdoMet to methylate tRNA. The TRM1 gene of Saccharomyces cerevisiae is necessary for the N2,N2-dimethylguanosine modification of both mitochondrial and cytoplasmic tRNAs. The enzyme is found in both eukaryotes and archaebacteria
Probab=97.88 E-value=0.00017 Score=50.36 Aligned_cols=107 Identities=17% Similarity=0.247 Sum_probs=77.6
Q ss_pred CCCCEEEECCCCCCHHHHHHHHHHCCCCEEHHHHCCHHHHHHHHHHHHHCCCCCC-EEEECCCCC--CCCCCCCCEEEEC
Q ss_conf 6662586013468827999999861688100552498999999999875028860-882155434--4572324678962
Q gi|254780634|r 230 TNSSQILDFCAGGGGKTLALSMLLNNKGQIHAWDNNKSRMAPIVARIKRAGIHNV-QLHSSWESL--RNLQEHFTTVLVD 306 (429)
Q Consensus 230 ~~g~~vLD~CAapGGKt~~la~~~~~~g~i~A~D~~~~Rl~~l~~~~~r~g~~~v-~~~~~~~~~--~~~~~~fd~vl~D 306 (429)
T Consensus 48 ~~~~~iLDalsasGiR~iRya~E~~~~~~V~~NDi~~~a~~~i~~N~~lN~~~~~~~~~~~DAn~lm~~~~~~fD~IDlD 127 (375)
T pfam02005 48 GRGIIVLDALSASGIRAIRFALEVPGVEEVFANDISPKAVELIKENVKLNEVENIVVINGDDANMLMRENHRRFDVIDLD 127 (375)
T ss_pred CCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCEEEEC
T ss_conf 58866975467541999999974699866999559989999999988865998737875475999998558867568678
Q ss_pred CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCH
Q ss_conf 754450444442236672496789999998789999999960898389997758882
Q gi|254780634|r 307 APCSGTGTWRRRPDIKWRLSQKNLIERTEEQKKILEESAQFVRPEGYLVYITCSILP 363 (429)
Q Consensus 307 aPCSg~G~~rr~Pe~~w~~~~~~~~~~~~lQ~~iL~~a~~~lk~gG~lvYsTCS~~~ 363 (429)
T Consensus 128 PfGS----------------p~----------pfldsAi~av~~~G-lL~vTaTD~a 157 (375)
T pfam02005 128 PFGS----------------PA----------PFLDSAVQSVKRGG-LLCVTATDTA 157 (375)
T ss_pred CCCC----------------CC----------HHHHHHHHHHCCCC-EEEEEECCCH
T ss_conf 9999----------------21----------77999999831598-8999944633