HHsearch alignment for GI: 254780634 and conserved domain: pfam02527
>pfam02527 GidB rRNA small subunit methyltransferase G. This is a family of bacterial glucose inhibited division proteins these are probably involved in the regulation of cell devision. GidB has been shown to be a methyltransferase G specific to the rRNA small subunit. Previously identified as a glucose-inhibited division protein B that appears to be present and in a single copy in all complete eubacterial genomes so far sequenced. GidB specifically methylates the N7 position of a guanosine in 16S rRNA.
Probab=96.95 E-value=0.013 Score=37.51 Aligned_cols=127 Identities=12% Similarity=0.148 Sum_probs=87.0
Q ss_pred CCCEEEECCCCCCHHHHHHHHHHCCCCEEHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCEEEECCCCC
Q ss_conf 66258601346882799999986168810055249899999999987502886088215543445723246789627544
Q gi|254780634|r 231 NSSQILDFCAGGGGKTLALSMLLNNKGQIHAWDNNKSRMAPIVARIKRAGIHNVQLHSSWESLRNLQEHFTTVLVDAPCS 310 (429)
Q Consensus 231 ~g~~vLD~CAapGGKt~~la~~~~~~g~i~A~D~~~~Rl~~l~~~~~r~g~~~v~~~~~~~~~~~~~~~fd~vl~DaPCS 310 (429)
T Consensus 48 ~~~~ilDiGSGaGfPGi~LAI~~p-~~~~~LvEs~~KK~~FL~~v~~~L~L~nv~v~~~R~E~~~~~~~~D~v~aRA~-- 124 (184)
T pfam02527 48 IRIKVADVGSGAGFPGIPLAIAFP-DKKLTLLESLLKKINFLEELKKELNLENVTIVHARAEEYQHEEQYDVITSRAV-- 124 (184)
T ss_pred CCCEEEECCCCCCCHHHHHHHHCC-CCEEEEEECHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCCCEEEECHH--
T ss_conf 798688347988846799999677-85599992828999999999998599976999560441464467878998100--
Q ss_pred CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCHHHHHHHHHHCCCCEEEECC
Q ss_conf 5044444223667249678999999878999999996089838999775888242999899999857997994143
Q gi|254780634|r 311 GTGTWRRRPDIKWRLSQKNLIERTEEQKKILEESAQFVRPEGYLVYITCSILPEENIQQINYFLSKNPHFSIDSII 386 (429)
Q Consensus 311 g~G~~rr~Pe~~w~~~~~~~~~~~~lQ~~iL~~a~~~lk~gG~lvYsTCS~~~~Ene~vv~~fL~~~~~~~~~~~~ 386 (429)
T Consensus 125 -----------------------a~l~-~ll~~~~~~l~~~g~~i~~KG~~~~~El~~a-~~~~~~-l~~~~~~v~ 174 (184)
T pfam02527 125 -----------------------ASLN-ELTEWALPLLKPGGYFLAYKGKQAEDEIEEL-DKACQK-LGVEVLFVP 174 (184)
T ss_pred -----------------------CCHH-HHHHHHHHHCCCCCEEEEECCCCHHHHHHHH-HHHHHH-HCCEEEECC
T ss_conf -----------------------5799-9999999863889899998899989999987-877998-297797648