RPSBLAST alignment for GI: 254780634 and conserved domain: PRK11933

>gnl|CDD|183387 PRK11933, yebU, rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed. Length = 470

 Score = 86.1 bits (214), Expect = 2e-17
 Identities = 70/244 (28%), Positives = 109/244 (44%), Gaps = 53/244 (21%)

Query: 211 GWFEIQDEGSQI-VSNLTAITNSSQ-ILDFCAGGGGKTLALSMLLNNKGQIHAWDNNKSR 268
           G F IQ+  S + V+ L A  N+ Q +LD  A  G KT  ++ L+NN+G I A + + SR
Sbjct: 91  GLFYIQEASSMLPVAALFADDNAPQRVLDMAAAPGSKTTQIAALMNNQGAIVANEYSASR 150

Query: 269 MAPIVARIKRAGIHNVQL-H------SSWESLRNLQEHFTTVLVDAPCSGTGTWRRRPDI 321
           +  + A I R G+ NV L H       +      L E F  +L+DAPCSG GT R+ PD 
Sbjct: 151 VKVLHANISRCGVSNVALTHFDGRVFGAA-----LPETFDAILLDAPCSGEGTVRKDPDA 205

Query: 322 KWRLSQKNLIERTEEQKKILEESAQFVRPEGYLVYITCSILPEENIQQINYFLSKNPH-- 379
               S ++ +E    Q++++E +   ++P G LVY TC++  EEN     +     P   
Sbjct: 206 LKNWSPESNLEIAATQRELIESAFHALKPGGTLVYSTCTLNREENQAVCLWLKETYPDAV 265

Query: 380 --FSIDSIIDD-------------WNQLYDLKNHPSLFIENGCCVLTPFLTNTDGFFFCR 424
               +  +                + Q+YD                      ++GFF  R
Sbjct: 266 EFEPLGDLFPGAEKALTEEGFLHVFPQIYD----------------------SEGFFVAR 303

Query: 425 LKRH 428
           L++ 
Sbjct: 304 LRKT 307